Difference between revisions of "Os01g0922800"

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==Annotated Information==
 
==Annotated Information==
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[[File:tonglu.png|right|thumb|''Flowering time control photoperiodic pathway of rice(from reference <ref name="ref3" />).'']]
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OsMADS51, also konwn as OsMADF65, is type I MADS-box gene in short-day promotion pathway in rice. OsMADS51 encode a protein which is composed 164 amino acids and contains an SRF-like MADS domain. And the K-box region of OsMADS51 protein is not conserved and C-terminal region is short. It function as an SD(short-day)-dependent flowering activator. Under the short-day condition, OsMADS51 mutants flower about 2 weeks later compared with individuals which overexpress OsMADS51 flower 1 to 2 weeks early. And under long days, OsMADS51 mutants flower 3 to 4 days later, meanwhile the overexpressors flower no more than 1 to 2 days early. In  OsMADS51 mutants，Ehd1 is down-regulated. That means that OsMADS51 acts upstream of Ehd1. Under short days, OsMADS51 transmit a flowering signal through Ehd1, and Ehd1 then turn on OsMADS14 and Hd3a. So does the long days condition. The amount of these activators under long days is quite low. In the plants which OsGI is suppressed, not only the level of Hd3a, but also OsMADS51 and Ehd1 are down-regulated. This indicates OsMADS51 is in the downstream of OsGI.
  
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OsMADS51, also konwn as OsMADF65, is type I MADS-box gene in short-day promotion pathway in rice. OsMADS51 encode a protein which is composed 164 amino acids and contains an SRF-like MADS domain. And the K-box region of OsMADS51 protein is not conserved and C-terminal region is short. It function as an SD(short-day)-dependent flowering activator. Under the short-day condition, OsMADS51 mutants flower about 2 weeks later compared with individuals which overexpress OsMADS51 flower 1 to 2 weeks early. And under long days, OsMADS51 mutants flower 3 to 4 days later, meanwhile the overexpressors flower no more than 1 to 2 days early. In  OsMADS51 mutants，Ehd1 is down-regulated. That means that OsMADS51 acts upstream of Ehd1. Under short days, OsMADS51 transmit a flowering signal through Ehd1, and Ehd1 then turn on OsMADS14 and Hd3a. So does the long days condition. The amount of these activators under long days is quite low. In the plants which OsGI is suppressed, not only the level of Hd3a, but also OsMADS51 and Ehd1 are down-regulated. This indicates OsMADS51 is in the downstream of OsGI.
 
  
  
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[[File:tonglu.png]]
 
  
 
===Expression===
 
===Expression===

Revision as of 13:05, 21 May 2014

Please input one-sentence summary here.

Annotated Information

Flowering time control photoperiodic pathway of rice(from reference [1]).

OsMADS51, also konwn as OsMADF65, is type I MADS-box gene in short-day promotion pathway in rice. OsMADS51 encode a protein which is composed 164 amino acids and contains an SRF-like MADS domain. And the K-box region of OsMADS51 protein is not conserved and C-terminal region is short. It function as an SD(short-day)-dependent flowering activator. Under the short-day condition, OsMADS51 mutants flower about 2 weeks later compared with individuals which overexpress OsMADS51 flower 1 to 2 weeks early. And under long days, OsMADS51 mutants flower 3 to 4 days later, meanwhile the overexpressors flower no more than 1 to 2 days early. In OsMADS51 mutants，Ehd1 is down-regulated. That means that OsMADS51 acts upstream of Ehd1. Under short days, OsMADS51 transmit a flowering signal through Ehd1, and Ehd1 then turn on OsMADS14 and Hd3a. So does the long days condition. The amount of these activators under long days is quite low. In the plants which OsGI is suppressed, not only the level of Hd3a, but also OsMADS51 and Ehd1 are down-regulated. This indicates OsMADS51 is in the downstream of OsGI.



Expression

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Evolution

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Labs working on this gene

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References

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Structured Information

Gene Name

Os01g0922800

Description

Similar to MADS-box protein PTM5

Version

NM_001051770.1 GI:115441910 GeneID:4327247

Length

19989 bp

Definition

Oryza sativa Japonica Group Os01g0922800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42139221..42159209

Sequence Coding Region

42139357..42139541,42157107..42157188,42157601..42157647,42157735..42157831,42158706..42158789

Expression

GEO Profiles:Os01g0922800

Genome Context

<gbrowseImage1> name=NC_008394:42139221..42159209 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42139221..42159209 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggagggggagagtgcagctgaggcggatcgaggacaaggcgagccggcaggtgcggttctccaagaggagggcggggctgttcaagaaggcgttcgagctcgccctgctctgcgacgtggaggtggcgctcctcgtcttctcccccgtcggcaagctctacgagtactcctcctccagcattgaaggtacctatgatcgctatcagcaattcgctggagccaggagagacctgaacgaaggaagtacaagcatcaacagtgatgaaaatgcaagtatacactccaggcttagggacataacggcctggtctctccaaaacaatgctgacgagtcggatgctaatcagctagagaaactggagaaactgctgacaaatgctttgagggatacgaaatcaaagaagatgttggcaaaacaaaatggtgaagggagtaggagcagagcaaactccagtggctctagggggcaggaggaaggaagtgcatga</cdnaseq>

Protein Sequence

<aaseq>MARRGRVQLRRIEDKASRQVRFSKRRAGLFKKAFELALLCDVEV ALLVFSPVGKLYEYSSSSIEGTYDRYQQFAGARRDLNEGSTSINSDENASIHSRLRDI TAWSLQNNADESDANQLEKLEKLLTNALRDTKSKKMLAKQNGEGSRSRANSSGSRGQE EGSA</aaseq>

Gene Sequence

<dnaseqindica>137..321#17887..17968#18381..18427#18515..18611#19486..19569#cgatcccctcctcctcctcccccacttctccccaccaccacaccaccacacacacgcacgcacgcacgcacgcctccgttttcccccaccgacgagaggcggagagggaggggagctagggtttttcggggcggggatggcgcggagggggagagtgcagctgaggcggatcgaggacaaggcgagccggcaggtgcggttctccaagaggagggcggggctgttcaagaaggcgttcgagctcgccctgctctgcgacgtggaggtggcgctcctcgtcttctcccccgtcggcaagctctacgagtactcctcctccaggttcgctctctgattccatccccctccctccccccgcctcctcctgttgttagtttgttagttacgatcaaaacccagccgcggccgaatcgagaccccccgccgcggcaggatctgccgattggttccgatcccatttcgttctgctatcccggatcgatcgatgattctccctgctatactgtatcgtaatgggtaagcctagtgcacgccatgtgctcgagactatctcgcagaggcccccccccacccccccaaccccccaccgccacctaccggcgttgcgctgcatgacagccctgtgatttctgattagtaggatcttgttctcttagcctgtacagtagcagcagccagcagcttgtatctagtatatgaagctttgacaccttgtactgttccgcgcttcgtctccccgacggcgtgggccgcgttgtttttcctcccctggtgtgcttttacacgtgtttcgcatgaggagacaccagccttcgtagaggcggaggcgcgcagcaatacgcgcatcaccctgagagccaccgcagtgtacggcctacggcgagtgaggagtttatcattttctcccaacttttttttcggcatcttgttttttttttctctgagagggagtgatgaaggagtacagttgtgtgtgttttctttaatttatttcagcgacagggacgaagtcggcttgctctgtagcgaccggcctattctcataaatagtcttttgttatggtattgagtggcatatgttaaataatattatttgatacaactgcttaaagatttttttgtaatggcttatttcttgtattttagtgtacacatcgaacaggactattcttagtgatatagtagtgggataacatatttatctaattaacctttattaatgatatactataaagaacattgataatatatttatatatgtcaagcaacttgattgaaaaacaagcacatcactcacaaagttagcccaattgtgcacaatagtccatttcataccatgatgctaaaaatcgcgcgctctgattgtttgagcgacaacccagaataattcataggtataatattttatatatatattaagtggtttaaaaaccaagattgaaaaatagacctcaataaaaaaaatgccccctaaaatcaactctcaaggagaaccgcgtttggctttggccgataatccacgaacaaatgatgaaatcacatattccatatattcgcattcacttatgaacaaatggcaacttttcttatttcttggtaatgtacgccctacacattttccaacccacatttttctagttttgcaccccctccaccaccaatatggtacaactacagctccaaaatttagctccaggagttaggtctggagtggagttgcctaaatccagttccacaactctagtttattttgtgcgagcttcacccagcttcactcccaattttaatggagctgtaattgtttggctgagctccagctccaagagaagtggagctagagctggagctgtgccaaacaggcccttagcttgtccaaatggtctagattcttatttcagattctacgagtcagaaggtgcataatcaataatcaatgaactggaagccagaagttggataacgtaagcttcagctagatactcaccaattgctttttaggatctgtagctttcttaaatagggcatttcctatctttaatactccatatgtcccaaaatataacgacttttagcctttagaatttgttccaaaatattacaacttctccaccaacattctcttctcaaccaatcacaaccctccaccattcaatttctccacctacattcatttctcaaccaatcacaatcttccaccatttaattctacttattttcttaataaccgtgaccaactctaaaactcattatatcctgtccgtcccaaaataagtttatttttcacgcatctcacgcgtaccaatatctaagaaaaaaaactagaatacattcacttcatcaaattccaatgcagttgttcctcactttatctactcctaatgtattttccccctacttttacaaactctgttgcaataattgctaaaatatgaacttattttgggataaatgggaggggctaaaaatgatcttattctgggacggatggagtagatgcttcttgtagcatatgtttttgaatttaactaccatcaagttccaccacaacatatagaagtatcttgtagtaaccgttattttgctattttgctaatgaaatagactagaggcattttagcttgccttgcacacgagtgacaagtaaactagaacggaaggagaattttattccccctcaatctgaccaaatcgatccaaagccataccagtgtatgattttccttactaaatgtgaggttgatctttcactaacaatgaataaactcctctaaattttgaactaggatgggacaatagacccaaattaacataaaactaggaaatcaatgcggcgatgtttaagtaatgaccatgattgtagacaacaaaataacacaaaattgataaaataactcgtacatgtatgtcatagattatttaatatttgttgggtcgtccccttcatgtgttaaatcatctaggaatttgtcctaacatttgggataaaaaatttcgctaataaatctattgaacatctaatgtacgacaaaagtctctatgacaacccactattagaaattggggcatatagatctccagcaaaccttaacattttattcaagggtttgtccttgaatacatccaggcaaaatgttgaggatttcaatcaaagttcgggccattggatttatttgacgcgtatcttaatggttaacatgtgccctacctcttcttaccttttcttgttatctcactattgaagttgtccatggttactaatactcaaagcctagaggctatacacgcactacctcctgctattccatatcacattctaaccacaatgtctacggttattacttattagctatgtttgcaatgcttcgggcttgcattcaactaagatagcaaaaaaaagtgttaaagtgttaaaaaatccccacaattcccggcacacgagggggtgggggttaaaaatccccttgaatataatttgactaggtatctcttctttgttggcttagaagatttagttgtgtttagtacttcatgaagttatggctatcactacaacttggtcaagtttgatttcttatctagtttgttgccatactaattaaagtgttgcattttgaaatgcacccaaagaagtgaattatgcacacatactagaatcattaacaatcgtttttaaacttgttttatgaatactaatatgtattttatacgcacgtaagacacacataatatgctgaccatatatgtgataaattatgaatgatcttatatcttttatactcccttcgtttaaaactagagggtgtattatgattttacacaatctccaactttgaacattaatttcttttgctataaattatcaactacaaaaacaatatcatatgagagtattttttaaatttgaatctaatgatactacatgtgtagcattaacaacatatttttgtttaattatcagtcaaaattttaaaatggtgattttacagaaaacaacgatgtcatatatatattagagcggatggagtatgttacaaacaaactaactagcatcattactacaaagcttgtccaaggttgaacaaaatcatctcaaaagctctaaccatcatatcattccctcaaaaggcacaaatcattccttgctagactgcttcctatgagtaaattacatcgagcagtaatgtttatcagttatctctatgcacaacctaataatacatcatgcgagtccacaacctttttgcctcctgccaatctatagtattacataattattagaacatagcatatgccattgtttttaaaattcttcctaaatattttaacaaatcaattctaaatatgttagaacatctattataatgtttcaacaatgcacatagtttcatctggtttccttatgcctctccgtagtcggatcattgatttgtcttacgacattaacaatgtgaagtgcaaaggtgctcccagggagaaaacaagtccacataatctagcgtttatgaaagagatgtttatctagttagtaaccaataattctgatattggttttcccatgggtgtgatggatattcattgcaacttacaggcaaataatattgtgcattttcttatttcgaaaagatatcgtacggatgaaagtacatgcatacacttttacacaatattatacaaaattaggtttgcttttcttatcttcagtcttataatataaacatgcaagcatatacaaaatattatctcaaaaatttataatcaacttatgtcaaacatgcaagcaaggatgttgacaagctttaaagtttctttttaaaaaggtcacacttatctgaaatgatcccaattatctcattagtttggatactatattactcctaaggcatgccaaatttataattaacctgacgggttaattttttacatta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gtttgtttcaacctattggtatgaatctgtttgattctgtaggaactgtggtttgctgtttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0922800, RefSeq:Os01g0922800

  1. ↑ Cite error: Invalid <ref> tag; no text was provided for refs named ref3
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