Difference between revisions of "Os04g0610200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0610200| Description = Conserved hypothetical protein| Version = NM_001060363.2 GI:297603334 GeneID:4336945| Length = 6465 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0610200|
 
GeneName = Os04g0610200|

Revision as of 19:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0610200

Description

Conserved hypothetical protein

Version

NM_001060363.2 GI:297603334 GeneID:4336945

Length

6465 bp

Definition

Oryza sativa Japonica Group Os04g0610200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31326156..31332620

Sequence Coding Region

31330700..31330717,31330793..31330894,31330993..31331298,31331372..31331434,31332375..31332473

Expression

GEO Profiles:Os04g0610200

Genome Context

<gbrowseImage1> name=NC_008397:31326156..31332620 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31326156..31332620 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcagcagtttacgagcattgacaatggcagaaagctggtatctgatattgatccatccaccaagattaacagtgataaaggagggattattgacaagaagatattgcgaactgaggataccacgtatgaacatactgcagaggccagagagcctgtacaggaacatatgggaggctgcaagcgtgggagatactattgcgacactggtgttaggaagaaggtccagactgattctttgccaaagtcctcccctggttgttccagcaatcacggacaaggacaacctccgatgttcacacatgaacaggtgcaacagatgattaatcaagctctacaagggttaaatgagacatgggagaagaagtttttgtctttggagcaaaacatgcggagcatgtcaaaatcacgcattattctggatggtccgaaaaaggggtcattggcggctgttgcaggggataagcgatgccagctgtcatgccaggacacattagattccgtggacggtgaaaaggatccagcgggggaaggcgaggacgaccccgagaaccaggattatgatgacgatgagcattggagctga</cdnaseq>

Protein Sequence

<aaseq>MHQQFTSIDNGRKLVSDIDPSTKINSDKGGIIDKKILRTEDTTY EHTAEAREPVQEHMGGCKRGRYYCDTGVRKKVQTDSLPKSSPGCSSNHGQGQPPMFTH EQVQQMINQALQGLNETWEKKFLSLEQNMRSMSKSRIILDGPKKGSLAAVAGDKRCQL SCQDTLDSVDGEKDPAGEGEDDPENQDYDDDEHWS</aaseq>

Gene Sequence

<dnaseqindica>4545..4562#4638..4739#4838..5143#5217..5279#6220..6318#gcgcgaagagaaaaaagggggaaaaaaaaccaaaaccctagcgatcgcttcccccgatccatggcgccgccgccggggatcctcgaggtgcggtgcgccgggtgcggcgagaccctggaggtggagcacggcctgacggagttcgcctgccccgactgcggcatggcccaggcgctcccgccggagctcatgccgccgcgcccccgccgcgcgctcccgctccccgggcgcgcgagcgtcgtcccctccgccgtgcccgcccccgccaccgccaccgccgccgcccctcccacgcgcgtctcgtgcgggggatgcgcggccgtcctcagcgtgccgcacggcccggggcggttttcgtgcccgctctgcggcgccgagatcgcgcctccccctcccctcgcggccgtcgtctcagtcgttgccccgccggcagcgatcccgattacctccaatcggccggcgatgacctccgaggtactatccagaatcatttcctcccaggatttccctcgcaatgcatcgttgattattggtttcattaagtgtttatttatactagctcaaatgtgagcaatgtggtgatggtatctgttggccttttgctacaaacttgtgacatgtgaggtgaaactactttctataggttgctagtagcataaccatgcttgtattgtacattgaggactatgtcctgtgtactaagcagtgagattaaatttgattaggaattctgaataagcatgcgtgactttactatcagatcacttggttttagcaaggagtcgctattgtagcattcctgttttaatctcaacaacccgcattttctcatgtttggctaaaaacgctagggatcagcatggccaatatatgggtaccccttgaccagttatagttcaactaaatatattgcatgtattagaaagctgtattttagttgacctaaagtagctcaatgagtacccccatggatgatccatgctcatccctaaagaataacaagtttaaaagttaccagcataaatggtcatttctcatttcgttcgaactgaatgtgtgcatttaaagaaagagtttacctatgcgcaatcatgattggtgcaattaaccagcattgttttttcaagtatccacgaattggaaaaaagtgatgtatttgattcagtcaactttggagaaaagtttaaacacttcaacatttgaataacaacatccctttgcccctttgacctttctattacttccaaagcacctgtggtaccactagtttaatgatcaaccatctataaataaataagtaaagattgcagccactatattctctaactgtcttgagctagaaattagcatgtttgttggatctgcacagttgattgtggtgcatcgaaattataactatggaaattgatcaaatatatattagagctgttacaagtcatgtaagaaatacaattatattggaagtttggaacaaacatgtggtatcattgatcaaagttgacagaattggctgcacttcccatggtgacactttatttagaccaatagtagtatttcatcacagtgtttcatggtgtttttcttctttcaggtgctgaatggaaattcaaatcagccaactcttgctggacaggttcagaagtccattattccagagcaatactacaagcattcttttagagaggagtcattcagttcattcagagttgactctaggacacaaattcctgatgtagggaggttacaaaacgagtgtgttaatccttcagctgatcgagaggagtcacgcacagaaccacctaacgggactatgaccaagcctggcaagaagaaaactacatctgcttctggtccaaaatctcatccagctggaaagttgcaggaagagcatattagtaaggccatccatgcatcaagggctcagggaatgccttcaaactctgtaggaggaggatttcacaatggcatgattgcagtgcacaacaagcagaaaactgggcatatagctgcccctagtgctatcgagcatgagcagataaacactctccatcaagtttgtgacaagcagcagcctggcgaaaattccagtgatttggttcatgtggagcaggtacaggtggcatgcaaagcagtacaaaacaataaaaaaggtaccaagtatacaaaaggaaatcaaaagaggcaaggtaagagtccgttgaattattcaactgagttgcctcatcttaggcgtagtcagcgcttaacaaagggttcgccagaccctattgatattgagcctatccataggatatatgcttccccaaaccaaaatcaatcagaaactccaccaattgagagggcgatagatgatacttaccatatttcaccaaaccagcaccggtatcctcaatcagtctctaataagttggacaatgctgatgcaactactcctgctttgaatcatagtatgcaacaaaaggagagaattccccagtgctacagccagatgtactctccagaaagtaggtgggtacttccaaatcgtagttctaattcatgtcatgagcatgagatgcctaatgaaagctttgatgggattgtccaactcgatagtagtgatgatgaagtgcattcaattccattagagaaccaaaatcaggatatggatggccaactagaacaacaagcttgtgctggcaagaacctttcagagcatggcaggcaaaagaatggcttcattggttcttcaggtgatgccaaacatcatgggggcttgtcctctggaatgggaacacgccaccagatgaatttggctgcttcatgcagccgccttgctgttttattgccagttgcggatgctactccattgcccaccatcagctcaccttcttcatttgaaagtctgtctgtcccactctccggcatgctcaattgtttctgttgagtcctttctaacatgttcttccgcacctgtgcagagctaccagttaactgtagcagtccaacaacaccgcaccagcaccaccaaccatcccccatctattctcaggttcctccctttatctattcttgctgaacctttttatttttctttgggtgatgctgaactttattttcagtttgaggtctgaacgccagtgtgcttgaaaagtggaaagagcagacaaccaagtttcttatagaagttttggcatggtttgatgaaatagggtttgcgttttagcatttgaaattgatgcatcttaataaatgtacatgcaggtttacaaacttgtgatgctgacttgaaaacttgcttgctggtttaaaattgttgatagatattacgtgttcagttccactattattccatgatatatctcaaatgttgtagtgctatgattataattgaattgcaagcagaaagctttctattgtattcaaatggaattcttttgcaatgacctaaggatgtaacatttgcacgtttcatgtgcatccttattttccctgtcaaattcactttataccttatttacccatgatgagcactgacatatcctggatccacacgtcattgagggaataaggggcaaatgagagattgggccaactttcaggggcaaataaggattttatcccatgatttgtgtattgtctgacaccgagcaatttcaggatgcccggaatggtgatatgctgtcagcatctgttagtaaatcatcaaaaaagcgcaggggccgtgcccctgcggtactaatggaaccacgcaaagaagctgacaggcctgtgctgacaccttgtggtgcagagtaagtgttggtgatgtgtatagatttatggaaggttaaataacttgcacattctaatcttcatgtgtatgaaaaattgatttatgcaactagaaactggactgtgcatccatcctgtttgaaggtgacaaccaccctatcccttcttatcaagcagaactatcctggaacctatgtttcagtgggtaccaatggccaaccctgtgagcttgcggttttccattggcaccaatgtccttcagatataagagatactgtattggatgaattccttgtgagtaacttacgggggcatgtttcatactattttcattgagatttaaaagtatgtgtgcttattatttaaaataatgcagaaacgctacaagtggtcccctggccaggaagaggagtgtcgaaagatctttgaccgtaaagcagttagacaattagttaacctcttttgctacgagaagcaaagggtcagagatttgctggcaaaaaaagccaaaagatcttcgacggttgttagggccagtaggtcgttagaagagggcgatggtagggaagattcagaggagcagcatggagatgagtctgttctggtgcttgagcttgatgatccgcttaactggaaaccattcgtccctgaatggatgcaaccaaaatggtgggagaagttgtgtgaccattgggcgaaagatgaagttatgaaggtctcttaccaaaaaaggaagaaccggaatgcaggaaaccccccctgtaatgcttcaggctcacagagcatagccaatgcatcagcagtttacggtaagaactaggaatgcaaatcctacttgttgacatctttctgcattagttaacgagccaggtgtgattttgtagagcattgacaatggcagaaagctggtatctgatattgatccatccaccaagattaacagtgataaaggagggattattgacaagaagatattgcgaactgaggtacctactcctgttacatgtacaatatttgaaaattttgaatctgtgaatagtatcactttgcacatgtcaacttgtactatactctttttttccaggataccacgtatgaacatactgcagaggccagagagcctgtacaggaacatatgggaggctgcaagcgtgggagatactattgcgacactggtgttaggaagaaggtccagactgattctttgccaaagtcctcccctggttgttccagcaatcacggacaaggacaacctccgatgttcacacatgaacaggtgcaacagatgattaatcaagctctacaagggttaaatgagacatgggagaagaagtttttgtctttggagcaaaacatgcggagcatgtcaaaatcacgcattattctggatgtaagtaaaaggcagttatataactcatttaattagcattcatattatttttatttatgtaatccatttgcagggtccgaaaaaggggtcattggcggctgttgcaggggataagcgatgccagctgtcatgccaggtaataatgaaatttgtattctgcctgtacatgtacctttaaagcagagttcagtatttgctagagagatgctatggtgaaagcctgtttctgtttgtcttagtgggcttaaaagtaagtccattgaaaaaggagtggcactaaatttaagctaccatggtctcttgttgataaccagatgctaattgataagtttgtgcgaacaatttaaacaaaacgaaatgataggcaatgtataaataataaaaaaaactgttctaaaaatgattaactgcttacaatgactgcacgagactacgagttagactacccagctggtctggcttatactgaaactcgacactgaccaaaatcaattcaaccagatgtatttttcttgatctcccttgcatgctaacctattaaacttgtccatggaaaattcttttgactgggtggtttagtgtgataaactctagtgcgttgatatggattgttttgctttatgatcatgtacaaatcatggcagagcctcttgtatctagtaattattatgggccaaagcataagctagatgaaaacattggtgattcggtggtgtgtgaaaccttcgatggaccggaggtggttggtccttgctaggggaatagatacttgggttgacaccaagagagatccaatattgcaaaaaaaaaaaaaattctaacatagctgctctattgcgtccatagatgttagtggacatataaatatgcctgctagtatgttaagcatgctccatttggaggtagtaactggtaaggtctcagcttttgtattcaaatttggaacctaacttgcataatttcttgaagcatcaatcgacgatatatgccaatcgctgaattcgccaatgtagctatccggcctttcttagctggagcacaaaacctaaccccagttcactcctgacgctttgcaggacacattagattccgtggacggtgaaaaggatccagcgggggaaggcgaggacgaccccgagaaccaggattatgatgacgatgagcattggagctgagccaaaacgtgagcttgtggtggcaccagattttcgtctcctcggagcacttcccggttgccagcgtgtaaatcatgtacagatttccagcatctgaaagcggttgtctcgatcgcttgctggtcgcttccccatacggcttcggag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0610200, RefSeq:Os04g0610200