Difference between revisions of "Os04g0610700"

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(Created page with "{{JaponicaGene| GeneName = Os04g0610700| Description = Similar to Potassium transporter 13 (AtPOT13) (AtKT5)| Version = NM_001060367.1 GI:115460463 GeneID:4336950| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0610700|
 
GeneName = Os04g0610700|

Revision as of 19:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0610700

Description

Similar to Potassium transporter 13 (AtPOT13) (AtKT5)

Version

NM_001060367.1 GI:115460463 GeneID:4336950

Length

5112 bp

Definition

Oryza sativa Japonica Group Os04g0610700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31351027..31356138

Sequence Coding Region

31351374..31351890,31352054..31352576,31352978..31353232,31353429..31353543,31353643..31353695
,31353830..31354090,31354166..31354216,31354393..31354641,31354739..31354967
,31355611..31355961

Expression

GEO Profiles:Os04g0610700

Genome Context

<gbrowseImage1> name=NC_008397:31351027..31356138 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31351027..31356138 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgtcgtcgtcgtcgtcggcgtcggcgtcggcgatgggcggcggggggatgcggaaggcgccgtcgatggagtggcggtgggtatccacggaggaggacgacgagggggaggaggacggggacacggtggaggcggcggccgcggccgtcggggccgtgggcaggggcgggagcttcgggtccgaggaggaggaggacgaggaggacggcggcggcggcggcgagggggagggggagggcgaggatggggagaagcagaagctgatccgcaccgtgccgtccgtcgactggttcgacgtcgagggctacgaggtctccgtcgcgcagcacatcgaggacagcgaggagtttgattttggcaggacaatgtttcttgcccttcagactcttgctgtggtgtttggagatattggaataagtccattgtatacatttgatgtcatgttcagcaagtatcccattcttggagaggaggatgttcttggagcactgtcacttgtcctttatactctaatttcgatgccactagtgaagtatgtcttagtcgtcctttgggctaatgatgatggtgaaggtggtatatttgcgttgtactctttgatttgcagaaatgcaaaagtgagtctcattccaaaccaagtacactctgagaagaggatgtcgagtttccgactcaagcttccaacgccagagcttgagagatccataaaagtaaaggagaagcttgaatcttcattgctattgaagaagttgcttctaggtctagtgctatttgggactgcaatgttcatatcaaatggagttatcacaccagctatgtcagtgctgtctgctgtcagtggcttgaaagttgggataccaaatgcctcacaaggccttgtggtgatgatttcagttgtacttcttgtaatcttgtatagtgtacagaggtatgccactagcaaaatggggtttgcacttggcccttctttacttatatggttttgctgtctcggaggaattggtatatacaatctcagtacatatggcccagcagcttttaaagcatttaatcctctctacattatttattattttgggaggaatccctttcaggcttggctgtcccttgctggctgtcttttatgtgcaacagggtccgaggcaatctttgcaaatctttcctactttcctgtaagatatgttcagtcaatgtttgcgcttcttgttcttccttgccttgtcttggcctatttaggacaaggcgcttttcttattgcaaaccaaaattcatctgagcagatcttcttctcatccatcccaagtggagttttctggcctgttttcttaatagccaatttagccgcattgattgctagtagaacaatgacgacagctatattccaatgcctaaagcagtcaatagctcttggttgctttcctcgactcaagatcattcatacgtctcggaaatttatggctaagatatacattcctgtcgtgaactggtttttattgttttcctgcttgggctttattctgctgttcagaagcatatatgatgttggcaatgcatatgccatagctgagcttggggtgatgataatggccacagtctatgttacaatcataatgcttctaatttgggaaaccagtattgtgaaagtgttgtcatttgtcatcacattcctctccttagagttggttttcttctcatcgtctctaagtagtgttggagatggaggttgggctctgataatttttgcatctggtattctaatggttatgttcatctggaattatggaagcaaactgaagtatgacagtgaagttaaaaagaagctttcaaaggatttgatgagaaaattggggcccaaccttggtactattagagctcctggattaggcttggtctacagtgagatagtgaaaggagttccggcaatttttggtcattttctgattgcccttcctgcaatccactcgataatcgtttttgtatgcatcaggaatgtaccagtgcccgtggttccccagactgaaaggtttcttttccaacgtgtttgtacaaggggttatcacatgttccgctgtattgcaaggtacggctacaaagataagaaccaggagagccaaagcacatttgagcgccttctgattgaaggcctcgagaagttcatacagcgggaggcagtagagctatccctacaaagtggagacgacatcgactctgacgaggagcctccaaccccatctaggacaatcgtagcgccaaatggtagcctctactcgcttgacgtccctctcctggcagactttgtgccttcggcagaagttattcctgaggccagttgctcaacgcctcagcacgatcctgtggtggattacacacagaaccttgagctggagctcgcattcatcaggcaggccaagcaatctggagccgtctatctcattgacaaccccatcgtcaaagccaggaagaattcctggttcttcaagaagctgatcataaactacttcttcgcattcttgaggaacaactgccgcagggcgatgatgtcgatgagcattccacacacaaatgtgatgcaggtgcgcttgacctcttatgtttga</cdnaseq>

Protein Sequence

<aaseq>MAASSSSSASASAMGGGGMRKAPSMEWRWVSTEEDDEGEEDGDT VEAAAAAVGAVGRGGSFGSEEEEDEEDGGGGGEGEGEGEDGEKQKLIRTVPSVDWFDV EGYEVSVAQHIEDSEEFDFGRTMFLALQTLAVVFGDIGISPLYTFDVMFSKYPILGEE DVLGALSLVLYTLISMPLVKYVLVVLWANDDGEGGIFALYSLICRNAKVSLIPNQVHS EKRMSSFRLKLPTPELERSIKVKEKLESSLLLKKLLLGLVLFGTAMFISNGVITPAMS VLSAVSGLKVGIPNASQGLVVMISVVLLVILYSVQRYATSKMGFALGPSLLIWFCCLG GIGIYNLSTYGPAAFKAFNPLYIIYYFGRNPFQAWLSLAGCLLCATGSEAIFANLSYF PVRYVQSMFALLVLPCLVLAYLGQGAFLIANQNSSEQIFFSSIPSGVFWPVFLIANLA ALIASRTMTTAIFQCLKQSIALGCFPRLKIIHTSRKFMAKIYIPVVNWFLLFSCLGFI LLFRSIYDVGNAYAIAELGVMIMATVYVTIIMLLIWETSIVKVLSFVITFLSLELVFF SSSLSSVGDGGWALIIFASGILMVMFIWNYGSKLKYDSEVKKKLSKDLMRKLGPNLGT IRAPGLGLVYSEIVKGVPAIFGHFLIALPAIHSIIVFVCIRNVPVPVVPQTERFLFQR VCTRGYHMFRCIARYGYKDKNQESQSTFERLLIEGLEKFIQREAVELSLQSGDDIDSD EEPPTPSRTIVAPNGSLYSLDVPLLADFVPSAEVIPEASCSTPQHDPVVDYTQNLELE LAFIRQAKQSGAVYLIDNPIVKARKNSWFFKKLIINYFFAFLRNNCRRAMMSMSIPHT NVMQVRLTSYV</aaseq>

Gene Sequence

<dnaseqindica>4249..4765#3563..4085#2907..3161#2596..2710#2444..2496#2049..2309#1923..1973#1498..1746#1172..1400#178..528#ggttttgtcgctctctctctctctctctctctctctctctctctctctcctgatctctcctcctcctcctcctccatccgcgcctccacatctccacacgcaacacacggagacgaatttttctcctggtcccttctcgcctcgcctcgcctcgcctctcgatccgatcgggatactatggccgcgtcgtcgtcgtcgtcggcgtcggcgtcggcgatgggcggcggggggatgcggaaggcgccgtcgatggagtggcggtgggtatccacggaggaggacgacgagggggaggaggacggggacacggtggaggcggcggccgcggccgtcggggccgtgggcaggggcgggagcttcgggtccgaggaggaggaggacgaggaggacggcggcggcggcggcgagggggagggggagggcgaggatggggagaagcagaagctgatccgcaccgtgccgtccgtcgactggttcgacgtcgagggctacgaggtctccgtcgcgcagcacatcgaggacagcgaggtgaggggcctctggcttgcggtttgatttacttcggtttgctttttttttctttttctttttctttcgtgcgtgtgcttgtgcgtcatttggtgcgagagatttggagaatgatatggctgtcacggtatgattaaagttgatttgcccatgcgattagaatcatgaggaaaaatggcaacgattaggcatgtgtactagttacttttggtttaaccttgtgttggacgacaatgagaatggtttgcaattgatcagatgcctaagggagatgtgatgttcatgatcttgtgcgatcaactacaccgattgtctgacaaatcacctgccttttcttttaaataaaaaactacactaattgtttgaacatactcatctagaaaaaaaaacattttgaagattcatccaagtaactgcgatttttcagggaagggaacattttgaagactcatcagctgaataatatttgcaaacatcctttcaaaaaaaaaaattgcaaacacccgaacgatgggatattcttatggtacatcgaaataattgtacctagatcctgaaatgtacacgctactttgaaaaaccagctagcattattgatgatgtttccttaattatcttccatatggtttatttacatgtgcaggagtttgattttggcaggacaatgtttcttgcccttcagactcttgctgtggtgtttggagatattggaataagtccattgtatacatttgatgtcatgttcagcaagtatcccattcttggagaggaggatgttcttggagcactgtcacttgtcctttatactctaatttcgatgccactagtgaagtatgtcttagtcgtcctttgggctaatgatgatggtgaaggtatatctgaggttgtgaatttagtttgtcatgttcagtcttgtataatgactaagttagaacattaacatctttcagtgattccatgactctacaggtggtatatttgcgttgtactctttgatttgcagaaatgcaaaagtgagtctcattccaaaccaagtacactctgagaagaggatgtcgagtttccgactcaagcttccaacgccagagcttgagagatccataaaagtaaaggagaagcttgaatcttcattgctattgaagaagttgcttctaggtctagtgctatttgggactgcaatgttcatatcaaatggagttatcacaccagctatgtcaggttatttcctttctccttttcctttttatgttcttcatgttcaagtatttgttactgggtagatcataaagaatacacaagacatcaaatggatactttacacttgtgtttatattaaaatctcctctcctaggagtgctattagttaatatttaactctttattcttgaatgcagtgctgtctgctgtcagtggcttgaaagttgggataccaaatgcctcacaaggtgatcctttagatccctgtatctgatagcacctaagcaaactatttatttaactccactaaatgttatttgcaggccttgtggtgatgatttcagttgtacttcttgtaatcttgtatagtgtacagaggtatgccactagcaaaatggggtttgcacttggcccttctttacttatatggttttgctgtctcggaggaattggtatatacaatctcagtacatatggcccagcagcttttaaagcatttaatcctctctacattatttattattttgggaggaatccctttcaggcttggctgtcccttgctggctgtcttttatgtgcaacaggtaaagatcataactagtcggcccatcatcagttacaattgatttccatcagcagtatgctattttaagaaggaatattcaactctttcttttgctaaaagaaacttgatacacttatccaaaacatattgcagggtccgaggcaatctttgcaaatctttcctactttcctgtaagatatgttcaggtatcgtcttgctaatatttcttttcttgtcacctagatatactcaatgtaaccactctctgtgattatatttaaatccatcttattcctcctttgcagtcaatgtttgcgcttcttgttcttccttgccttgtcttggcctatttaggacaaggcgcttttcttattgcaaaccaaaattcatctgagcagatcttcttctcatccatcccaagtaaggcagatattgctgaacatttacccattcttttttaattgaataatctcaatcgacgtataatccttatattttgaaaaaaaatatatattagtgattacattgactgttttttcttcaataattttagccgataccaagtattccatagcacttagatactttggcttactacgcgttgttttcgttgcaggtggagttttctggcctgttttcttaatagccaatttagccgcattgattgctagtagaacaatgacgacagctatattccaatgcctaaagcagtcaatagctcttggttgctttcctcgactcaagatcattcatacgtctcggaaatttatggctaagatatacattcctgtcgtgaactggtttttattgttttcctgcttgggctttattctgctgttcagaagcatatatgatgttggcaatgcatatggtaatcctatatacttgtatagttcatccccactaagtgtagttaatgttatctctcttctatcattaagccacatcaccttaattatttctagccattggatgatagatctatggttcaaattgtctcttctttcttctctcataacaccaagtaatctcaattttttaggcctcaaaattcataagtatcaatttgttttagttttaatattcgtatttaatcttatttgtgcatattatgcaacttaatttccctcagcaatgtggcagggtattcatctagtaataacttaattatatggttatactttttagtgcaaatctgtctatttatctgctttttaataagttgtaatgctcagtgttctacatgcgcttaccctgttccatattgaacagccatagctgagcttggggtgatgataatggccacagtctatgttacaatcataatgcttctaatttgggaaaccagtattgtgaaagtgttgtcatttgtcatcacattcctctccttagagttggttttcttctcatcgtctctaagtagtgttggagatggaggttgggctctgataatttttgcatctggtattctaatggttatgttcatctggaattatggaagcaaactgaagtatgacagtgaagttaaaaagaagctttcaaaggatttgatgagaaaattggggcccaaccttggtactattagagctcctggattaggcttggtctacagtgagatagtgaaaggagttccggcaatttttggtcattttctgattgcccttcctgcaatccactcgataatcgtttttgtatgcatcaggaatgtaccagtgcccgtggttccccagactgaaaggtttcttttccaacgtgtttgtacaaggggttatcacatgttccgctgtattgcaaggtatgctatatcttacttgaagtttagctccgtccttataagcattttgcagttttgtcatgcgaaatagttactgatgtagtttctcctggagttaatttgtctccaagtatgtgtagtcgtcacaaaaagcttatgatggtgttaacttggatgagtgtaggtacggctacaaagataagaaccaggagagccaaagcacatttgagcgccttctgattgaaggcctcgagaagttcatacagcgggaggcagtagagctatccctacaaagtggagacgacatcgactctgacgaggagcctccaaccccatctaggacaatcgtagcgccaaatggtagcctctactcgcttgacgtccctctcctggcagactttgtgccttcggcagaagttattcctgaggccagttgctcaacgcctcagcacgatcctgtggtggattacacacagaaccttgagctggagctcgcattcatcaggcaggccaagcaatctggagccgtctatctcattgacaaccccatcgtcaaagccaggaagaattcctggttcttcaagaagctgatcataaactacttcttcgcattcttgaggaacaactgccgcagggcgatgatgtcgatgagcattccacacacaaatgtgatgcaggtgcgcttgacctcttatgtttgattgccgaatggtaccctttccgacacccttttgttttgttcgttgctatcaagtagagataacactaactagagaagaatggcattgcaaagagaagaagagtatagttgcacctctagcattattcaggaagggataacatctgttttaggaatccacgtctcctgtaatttttgtacaattgcgaaatgtatctgcaagcaaatgttgtgtagcaaacacatcagagtgtggtgagctaacatgtgtattcctgtgtgaggaagagattcttttgccatgtactagacaaggtactcgttttgagtttttgagtaaaaattttgatatctacaagtgttaacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0610700, RefSeq:Os04g0610700