Difference between revisions of "Os04g0620400"
(Created page with "{{JaponicaGene|
GeneName = Os04g0620400|
Description = SIT4 phosphatase-associated protein family protein|
Version = NM_001060441.1 GI:115460611 GeneID:4337029|
Length = 9...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0620400| | GeneName = Os04g0620400| | ||
Revision as of 19:59, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0620400 |
|---|---|
| Description |
SIT4 phosphatase-associated protein family protein |
| Version |
NM_001060441.1 GI:115460611 GeneID:4337029 |
| Length |
9068 bp |
| Definition |
Oryza sativa Japonica Group Os04g0620400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:31930523..31939590 |
| Sequence Coding Region |
31931980..31932018,31932101..31932204,31932787..31932873,31932954..31933029,31933135..31933209 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:31930523..31939590 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:31930523..31939590 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttttggcacgtacctggaatctctgctgcatcaccggtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaaataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaaagttcaagtggagcaattactccactacattgtcgaagaggcacctgaagatgctgaaaagaagaggatatttcgatttccttttgtagcttgtgaaatatttacatgtgaagtggatgtcataatgaagacattagtggagaatgaagatctcatggacttgcttttctcctacttaaaacctgaccgacctcatgggacactgttggctggttacttttgtaaggtcgtgatttgcttgatgctgaggaagactctcccattcgtcaattatgtgcagggccatcctgaaatagttagccaacttgttgaccttattggtataacttctataatggaggtgttgatccgcttgatcggtgctgatgaaactatgtattctggttatgttgactcaatgcaatggttggatgacataaaggtccttgagatgattgttgacaagttcagttcatctgattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcgataactagatatgccccaccagcgcttgctacaaaaatatccagtgcaagttttgtggcgagactatttcaccatgcttttgaagattcaaggcctaaatcggtgttggtccactcattgtcagtgtgcatatctttgttggatcctaagagacttgtattagcttcctaccaagttttccgtagtcaactaagccatgcaacattggtcactgcaagtccagagacagttggtggcatgctggatagcctaggtgatttgttgaagctgctggatgtttcatctgctgaaaatgttctgccaacgacatatggagtcttacaacctcctctaggaaagcaacgcttgaagattgtagagttcatctccgtcctgctctcaattggaagtgaagctgctgaaattcgattgatccatctaggagcaatcaagcgtgtcatagatctattttttgagtacccttttaacaactttttgcaccaccatgtggagagcatcatcagttcttgtttagatagtaagcaggatcagctgatctgtcatgttcttgatgagtgtaagcttgttacaagaattttggaagctgagaagaactctgctctatcaatagatttaactaagcacacggttcctttggaggggagatttacaccaaggatcggacttgttggtcatatgacacgcatatctaacaaactcattcagctggctaagaccaacagcataattcaatcacatttgcagcaaaattctgggtgggctgagtggcatgctggaaccctaactaggtgtaacgcagtagaaaatgtttaccagtgggcttgtggccggccaacaacactgcaggatcgaggtagggacagtgatgaagaagactttcgagatagggactacgatgttgctgcgcttgctagcaatttgagtcaggcatctaaatatggtatttacagttatgaagatattgatgaggatcaagtaccacatgagcgagatgatgaggacgtatattttgacgatgaatctgctgaagtggttatttcctctcttcgtcttggtgatgaacatgacagcaactccttgtttacaaattccaattggtttgcatttggtgaggataaagcactgaacggcgaggtcaacccagaagcttccccatccccaaattcagagatatcttctccaaatgttgatgatgagaatgatgaagtcattcttactgaggttacagatggcagaaagggttcagagtcacttttagcagtcgacttgaatgaagaatctagtcacacaggcttgacaaatgtctccattgataaattggaagatg</cdnaseq> |
| Protein Sequence |
<aaseq>MFWHVPGISAASPVDTILDKENFKLEDLLDEDEIIQECKALNTR LINFLRDKVQVEQLLHYIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENED LMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGI TSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILC AITRYAPPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASY QVFRSQLSHATLVTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQR LKIVEFISVLLSIGSEAAEIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDS KQDQLICHVLDECKLVTRILEAEKNSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISN KLIQLAKTNSIIQSHLQQNSGWAEWHAGTLTRCNAVENVYQWACGRPTTLQDRGRDSD EEDFRDRDYDVAALASNLSQASKYGIYSYEDIDEDQVPHERDDEDVYFDDESAEVVIS SLRLGDEHDSNSLFTNSNWFAFGEDKALNGEVNPEASPSPNSEISSPNVDDENDEVIL TEVTDGRKGSESLLAVDLNEESSHTGLTNVSIDKLED</aaseq> |
| Gene Sequence |
<dnaseqindica>1458..1496#1579..1682#2265..2351#2432..2507#2613..2687#2775..2828#3819..3878#4007..4123#4486..4580#4700..4902#5321..5418#5682..5785#5852..6017#6085..6207#6663..6745#7630..7771#8496..8525#8642..8712#8812..9068#gctctcgccctcctcctcctcatctcatctcgcgattggtgaaattctagggttgtgcggatttgctcccccgggccaaccggatccaggtcgacgagcgcgcgcgcgcgaggggtcttcaaaagcgctcttcgggatcgcgttcgcgtgagcgccagctatacactcactccgccgccgcgacgaacgacttggggcttctccgttggctactggtgaggaatcgcgctccttactcgagctatcaaactgccgctgcggtggcggcggcgactgcttgctgttggatcaccctttccactttgtgcttggtttagtttagccgagcgcttgatttcgatgcgtcgtaggaaggaggagcaggtgtgcgtagctggaagctataatggcgaaatgacactgtttgtgtttgtgcgcttactatttttatttttgtttttattttatttgtgtgcttgggtgggtgggggcggctgtgatgctgttgtgtcagttatcgctttagctgtttcgctttgggagattggtgcttgtggtgctggaagctcgtaggattgctttggcgtatttaagcttttggaggtgggggactgaggagtgaggagtcgggatgggtgtatcaatatatatattagcgccgatgtgcttttgctattgttttccgtagttaatgcgatcggttccggattacgtagtatgttgccttttgccttttcgcgttgaggaggagtagttgggtggttttgggagatggtgttggcttgatgtgttccaccgtacagttcttttcctgcttcatttgtgtctctcgacgcagtaatctaggaattcggaactgacatattcgggtgatgcttactaatgtacatgctggttaccacgacttctcgggtgagtatatggtgggatttgtgtttattgttgttatgctgaaaacgtggtggttgtgaaattgggttgtacaggatggactctgttcaaggaatttgatttggggtaggatttgggggtgtgttttcaactttggttcttgtttgaatttctgaaggttttccgtttgttttgttagctcttgtagtgtaatcgcattgttatcttatggaagagagacatgcgtgtggaagctagaaagggttgatatgattaacatgcagcaatcttatttctcttcaggtctatataccaaaagataggtgtatagtttctataacttcactatagtgctaatgcttataatggacaacagcgtgtagttcattatgattgatcatagctgtattttcttcatcaatttaaaatgtggttctgttttttctcacaatcagctattgcagggtctagtctgaagtctgaacataaatgatgaatcttctcagaatgtggaagtttgagctctaaatccacttggtttgtgaggtgttaagagcactggacagtgatagttgttactgtgcaaaatgttttggcacgtacctggaatctctgctgcatcaccggtgagtgcttacacttttagtgaccatgtgttgtgtaaggtatatttgtttgattcagcggtcatcttgctatttctttcaggtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaaataatccaggagtgcaaagcactaaacacccgcctaatcaatttgtactatttctcttttagagtactgtttctctgtagttgttttcttgtacaatttctattctgggacacagtttttccgttgcatttttttttccttccttgagttgtgattgatcttagagcgtatgctgatattgttcaccaaatggatatgtgtgactatctatgttatctatatgtactaccaaatgtctgctctgtgaatgctgttcatgcctaagatagtagcatattacaggtaagtatataggagggagatcctcactaagcttgggttaaagtggagtactgtatgataagtcatcgaaccttatttcaaccagctacatgaatgtttcctggcatgtttattatcaccttttctttacatttttcttaccgcaattctttttaatctggtgtacgacttgtgaataaaggagaggttatgaatgtgtggccaagtgtacatacaagaggaatgggcgcacatccacaatatagctttgctagttgaaccacacataaatttaatatcctttaattatatggcaccggaagatgatttgataatgtgctattcatttattctggtcattgcagtctgcgggacaaagttcaagtggagcaattactccactacattgtcgaagaggcacctgaagatgctgaaaagaagaggatatttcggtatacatggcttatggttgaataaaaaaacacttaatgcaatccccacatgtggaattctcacgaatttttgtgtgcagatttccttttgtagcttgtgaaatatttacatgtgaagtggatgtcataatgaagacattagtggagaatgaagatgtatgtttcattttagttttcttatgttagcttgatacaatattattctcctatcatggtgtacaattatcttgtatgactaatgaagccatgctatctgtgcagctcatggacttgcttttctcctacttaaaacctgaccgacctcatgggacactgttggctggttacttttgtaaggtacttttatgcaaccattcacgtctgcaaattttttgtctcagcctggctgattaaatggtcattatatactgctaccttttgcaggtcgtgatttgcttgatgctgaggaagactctcccattcgtcaattatgtgcaggtttgtgtagttctgctgtcagttgtcagctcttcctttgctcttttgttcgctcactgttctcccaagttagccttgccttcatctgtctttcttatgcatttgtatttactgtgaaacagtggtttctgtagtaagcaatttgtgcaacagctattacagctaacgccattttgtgaagcaatgtttgttcagctgatgtcacttttgggagaggtgaatctaatccatttaggatataaattgttttaggacttagtgacgtgctataaataatctagagtaattcattttcagtataggtttggaggatagttgtgaggctacataggggatgcaactgtattgacgcaaagaatccactgaagcgtagacatggaaactcatcttaaagcaaggatgagcaatttggcacatgagtggattaaaggtgtgatatatgtttagcattagattcttctaacgagcaaggatatttgttcaaaaggtctaagaaggacgtgggcgtgtggtagagcaacaatgccttgtatctccaaggctgtgctgaaagaatttgcagttggtctttgccaaaacttctcatgctgtgattgtttcgttgccattagcccattatttacgttctttctataagatccacatccacctattgtttgatgttgtgcacgggtgttaaggtatcaaatctacatctggggctgcaacacaaataggtgtagagtattaaagttggaatcatcaaaatgacagttggtcatagagtagaactaaaaacctgtgacagtgaacatgcacttgtagatgagtttctcatttgtctcagctttacacatgttgaacatctgaaactcatttttcacatctcttgtaaccattcatattatgtttaaaggttgtactgtggagaggtgaatccatacattggtgttctgtgcataaatattacttacggatttgatttttatgtgttgcttattcctgctgcagggccatcctgaaatagttagccaacttgttgaccttattggtataacttctataatggaggttagctttctaaagacaaatttaaatgccaaaaaaaatcatctgtagctttggaaagtcatggtaacaaataacatcactgattaatcggcttaaacagtttgatagcttgttggtttgtaatgcaggtgttgatccgcttgatcggtgctgatgaaactatgtattctggttatgttgactcaatgcaatggttggatgacataaaggtccttgagatgattgttgacaagttcagttcatctgtaagaactaaagattacttttagcatctcgtctcactttgtcaatcttctgcttgtcttgtttattgttgctccaaactattttaacaataggaccgctgcttgttacttcgttaatttctggtcagcatgcatgcttccagttttaacggaaaaataagttaaaacttcccttggaatttaaatgatcaagtactgtcctcaagtactaactggttacattccattcttttgaagatggcacaatttttatcatattcaaatgcaggaagtgttggctatttatatgctgttcatatataatagaaatttgtgggtaatgcttttttttattaacatactcgttataacttctgttgaaggattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcgataactagatatgccccaccagcgcttgctacaaaaatatccagtgcaaggtgcttttccatctgcccatattgctgaaatttttaagatgtgtaaagtctctgggctttgtgatagcaatttgatattcaaaacaattctgtgtatcctttttacttcatggttgcagttttgtggcgagactatttcaccatgcttttgaagattcaaggcctaaatcggtgttggtccactcattgtcagtgtgcatatctttgttggatcctaagagacttgtattagcttcctaccaagttttccgtagtcaactaagccatgcaacattggtcactgcaagtccagagacagttggtggcatgctggatagcctaggttagtggttccttaagctgttatgtccatatatcttttcgtttggtgagtcactctggctatggtcctttaaaatatacatcctttattgtcattttacattatttgctgtccacaattaagtccagctcttgttgtggattgcttttattaattcagaacctttacctgagtattattcaggaaagctttgtatcttcataaaatggtgtagccaatgataagacacatataaaacttctgaatacctcttttgagtaacatgtatacattcttctactatcatttaagcatcctacattcaactatttcttttagttcttatgattataaagtgcaagtaacacataaagatgtatgctccaacctccaaggctaatgcactgaaagatcttaatttctaccaatgatgtttaaggtgatttgttgaagctgctggatgtttcatctgctgaaaatgttctgccaacgacatatggagtcttacaacctcctctaggaaagcaacgcttgaaggtatgagtgcttaattatatgcaggtctgtcgagccacaaagtgcatagattacatgacataacagcgatttgtgcctatttgtgtttgccagcattttacatcgctgttgcacaattatacacttttttgtctgcgaagaccttgaatataaatatacttatccataccattggtgccagatgtctatttgacctttgatttctgttgtttaggtaattgctttacatttttcattgttattcttgatgttttttttttcagattgtagagttcatctccgtcctgctctcaattggaagtgaagctgctgaaattcgattgatccatctaggagcaatcaagcgtgtcatagatctattttttgagtaagttaaattgcaatgttgtttctcataagtttgtcaaggagctgacatataattaatcattaggtacccttttaacaactttttgcaccaccatgtggagagcatcatcagttcttgtttagatagtaagcaggatcagctgatctgtcatgttcttgatgagtgtaagcttgttacaagaattttggaagctgagaagaactctgctctatcaatagatttaactaaggtactaaattaatatcccactctttattttattaaacaattatatttacttgcaattcccctttcagcacacggttcctttggaggggagatttacaccaaggatcggacttgttggtcatatgacacgcatatctaacaaactcattcagctggctaagaccaacagcataattcaatcacatttgcaggtctgtattcgattatgcatagggaaaccttcgtattgtttacatccccgacatgttagtggttttattaatggtcccttgccaattatctgatggatccctagacaagtggtcgacatgaatggttcttgcatacagaatatctgatggtttgcattaaacttgggttaacccattagtgttctgaatgatacttcccttataatacaggaaatgaaagttaaacatgatccaaggtgacatgtcttaaccacactgtctgttgaacataatgattacgtgaaatatccaatacaacaatcaatatgtttattacgggcctcgtagcttcttaaatatttattggtttgtttttctatacaagctcattcttgcaaattttgattgtgtgatatgcttttgaaaattctagtggcagcattctttgtttgactcacttgatttggttctttcagcaaaattctgggtgggctgagtggcatgctggaaccctaactaggtgtaacgcagtagaaaatgtttaccagtgggcttgtgggtaagtaccatgtttaattcttttatgttaatcatttgcaatctgtatgtataattttcaacgaataataccatattttttctgtttgaattcttctttatttctgcctgttgtctccttatgaaccactttgactgtgctgtgctgaaggtaaaagataaaaaccacataattctaagaatatggctgcacgtgtggtccactgtgtcagtgctgccctgatctctaaaagtgtattaggcattgatagatttcttggcagttgccactccattttctcagagaagatatggtcaataatgttttattttggaataattaggtaattcattttgatagtagcacaaacaactattagtctattaccaccatatgccattagaagagagatgatttaatttccattgagcttgagctccaactttgtctattttagctccatgcatatactatggtcaacccctgaaaattttagttttacaaatggacagatgactgttttttgtgatgaatttgcacagtataatagttcatcagatggtaagttcaagctgaatgtggcagttttactcattacttcctccgtttcatattataagactttctagcattgcccacatttatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtaattattatggagaaacagataggttatgtttccagtgccaattcattaataatttaggatcagaatatatgtcatgcatgttcatataagttattggggtttactccagacttcatatcctgcgtacaacttagcttgctttctacatgcctttgacatcttctggggaaaaaggatctgctaaacactgtatcatttatctggtcatagccggccaacaacactgcaggatcgaggtagggacagtgatgaagaagactttcgagatagggactacgatgttgctgcgcttgctagcaatttgagtcaggcatctaaatatggtatttacagttatgaagatattgatgaggtcagcagttgaacaaaattcattctattaagatatacttcctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgcgaaacggagggagtagttaataactactccctccgttaaacttcacttctagtctctaccattagtcctaaaataacttcatttctatcctcttacggttttacctaccctcggttcaaaaatcgatgagctttattcttcaataagccttaccaactccttacctaaccatccacccaccaatactaccttttctatctctaccttgttttgcacacccaaaactaaaaatgaagttattttgggatggagggagtatgtttgcattattagtcttggattgattctgtattgtttttagtttgatctgcaaagttgtattctctaatatgggcccactagtgtacattgaagattcactcgagattctgagtcctaagaattccacctgaaatgctggatttatgtttttttgtgaggctaattttctaactatccaattgtggacctaagaagtgtattttagtttgtcttttagatgcaactatgaaagaaatttacacatgcatatatatttgacgagttactctttggtgggtgatatatgcaggatcaagtaccacatgagcgagatgatgaggtatgttcaccttttttgcttaggtttgggcatccttacatgctatatatcaagttgacaagattcctgattcatacaatgtgagtgcatgttctaatttttacttacttccataggacgtatattttgacgatgaatctgctgaagtggttatttcctctcttcgtcttggtgatgaacatgacaggtattttctagtctatgctctttgtattgtatgtgctctttcgtaagttcatttaaatgctcgcaataaggattggctgatgaataatatgccttgcagcaactccttgtttacaaattccaattggtttgcatttggtgaggataaagcactgaacggcgaggtcaacccagaagcttccccatccccaaattcagagatatcttctccaaatgttgatgatgagaatgatgaagtcattcttactgaggttacagatggcagaaagggttcagagtcacttttagcagtcgacttgaatgaagaatctagtcacacaggcttgacaaatgtctccattgataaattggaagatg</dnaseqindica> |
| External Link(s) |
