Difference between revisions of "Os09g0252700"
(Created page with "{{JaponicaGene|
GeneName = Os09g0252700|
Description = Similar to E3 ubiquitin protein ligase UPL1 (EC 6.3.2.-) (Ubiquitin-protein ligase 1)|
Version = NM_001069221.1 GI:11...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0252700| | GeneName = Os09g0252700| | ||
Revision as of 20:55, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0252700 |
|---|---|
| Description |
Similar to E3 ubiquitin protein ligase UPL1 (EC 6.3.2.-) (Ubiquitin-protein ligase 1) |
| Version |
NM_001069221.1 GI:115478181 GeneID:4346521 |
| Length |
3662 bp |
| Definition |
Oryza sativa Japonica Group Os09g0252700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:4586123..4589784 |
| Sequence Coding Region |
4586124..4589784 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:4586123..4589784 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:4586123..4589784 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>attcgcctttctgcttttatcgttcttgtgcaggcaagccatgactcagaaagcctagcattgtttttgaacaacgaaccagaattcattgatgaattattatcgttactaagctatgaagatgagataccggagaaaattaggagattggggatcctttcgttggttgctttgtgccaagataggtcacatcaacctactgttttgtcctcagtaacttctggtggtcatcgtggtatccttcccagtctcatgcaaaaggcagtggattcaatcatcaatggttcgacaaaatggtccacagaatttgctgaagagcttctatctcttgtctccatgttggtatcatcaactccaggttctttagctcttcaagaagcaggctttatacccactattttacccctcctcaaagacacagacacacatcatctacatctagttagtactgcagtacatgtcattgagggcttcttggattaccacaacccttcttctgcattgttcagagatctaggtggtctagatgacactattgcacgcttaaaaatagaagtgtcgcaggttgatattggttcaaagaaatcagaagaacctcagtctatgagtaaaggtaaagaagttgaaagtagtttgcctccgccagatatgcagactgttcattctgaagcgttaatttcttataatcgaaggaacttaatgaaagccttattgcgtaccatatctctggcaacatatgtgcccggtagctctgctcgtgttgatggttcagaagagaatgtattgcctccttgtttatgcaccatatttaggagagccaaggagttcggtggtggggtgttctcacttgctgctaccgtcatgagtgatctcatacacaaagatccaacttgctttactgtccttgatgcagctggtttgccgcaagccttcattgatgccatcatgggtggcattctttataattctgatgctatcacatgtataccacagtgtttggacgcactttgcttaaacagcagtgggcttcagttagtaaaggaccacaacgctttaagatgctttgtgaaaatctttacttccagatcatatctgaaagctctgggtggggacactgcaggggctttatcacttggacttgatgaattattgcgtcatcaatcgtcactgcgatcttctggagtggacatgcttattgaaatcttgaacaccatctcaaaagttgggtgtggcggagagtctagttcttgtacagaatctggtaactcctctacgccacttcccatggaaactgatgtgcagggaggtacttcaaggagtgaggttggaacttctgaggtgggaagttctgagaagatggtagatgcttccctagatgcaacatcatcgtcaatcgagtcatatcttcctgaatgcatatgcaatgttggtcgtcttattgaaactattctgcaaaattctgacacgtgtaggttgttcagtgagaaaaagggcattgaagctgttcttcagctgttcaaattgccattaatgccggtatctgtttcagttggacagagtatttcagttgcttttaaaaacttctcatctcagcattcagtttctctcgccagagcagtttgctcattctgtagagatcatcttaagctgactaatggactgctgggttcagtttctggaactaagctggttattagtgatcatgtgaagcaatcacctctcctgaaagcactttccagtcttgaagggttattgtctctttgcaattttcttctgaagggaaacgccttcatggtctcagaactggcttttgctgatgctgagatattgagggaactaggtaaggtttatattgaggtcacatggcagatatctttacttagtgattccaaggtggagaagcaagacatggaacaagatgatgtgcctggagatgcctcagtctcaaatttatctgaaagggatagtgatgatgacacaaatgcagcatcagttacaagacatatgaatcctgtttcagtgagaacgtcctctgtatcaccatggaatatggaacaagatattatatcagcagtgcgttctgctgccagcatacatcgccatggtcggcacacgctatcaaggatacgtggtcgccttagtggagctatggatgcagcacatactgatatagacagtcctttttctccaggagaaagttcacaaagtcatgatactataaaaaagagtcctgatgttgttgtttctgaactcctgacgaagcttggacacacgatgcgttccttcctttctacccttgtcaaaggattaccagctcgccgtcgtgctgactcaagtctgactccagcctctcgaagtcttgtgattgctcttgcacaactttttcttactgctcttggttattctggacattctactgctggctttgagatgtcattatctgtgaaatgccgatatcttgggaaagttgtggaagacatggcagcacttacctttgacagcaggcgtcgatcttgcaattctgcaatagttaatagtttctatgtgaacggaacattcaaggagcttctaaccaccttcgaagctaccagtcagttactttggacactacctttctcagtcccaactactggctcagaccaagcttcctctatcagtgaaaaggtgtctcacaattcatggctgctggatacattacagagttactgtaaattgctggaatattgtgtgaactcttcatttttattgtctccttctcataatcagcttcttgttcagcctatggtcactgaactgtccattaatctgttccctgtgccctcagagcctgaatcatttgttcgtattctgcaatctcaagttttggaagcagtcctacctgtttggaatcatacaatgttccccgagtgtagcccgtctcttatcacttccttgatctccattgttagccatatatgctctggtgttggtgctctaaaacaaagccgtgcaggtgttggagctgcgaaccagcgtcttacgagtccccctcttgatgagtcctctattgctacaattgttgagatgggattttcgcgagctagggcagaagaagccctaagaagtgtcagaactaacagtgtcgaaatggcaacagattggttgttcagccatccagaagagtttgttcaagaagatgtccagcttgcacaggcattagctttgtcacttggaaacaccactgaagcatccaaggaagatggttgcaataagaatggtccaagtgtcgttgaagataaaggtgtcatcttgcttcctttggatgacattcttgctgtatcaacaaagctcttctcttctggtgatgacatggctttcccattgactgatcttttagttacactgtgcaaccagaataagggagatgaccgtcagccggttatcttatatctttttgagcaacttaaacgttttccatcagattcttcagttgatgcaggcgcattatattcttttgcccgtttgctggccttacttctgagtgaagacagtagcattcgtgaaattggtgcagaaaatggcgtggtccctcatgttcttaatttattggaaaaccttaaatcaaggacagagaaaacagatcaaacttggaattctatcagtgctttgttgcttatattgg</cdnaseq> |
| Protein Sequence |
<aaseq>IRLSAFIVLVQASHDSESLALFLNNEPEFIDELLSLLSYEDEIP EKIRRLGILSLVALCQDRSHQPTVLSSVTSGGHRGILPSLMQKAVDSIINGSTKWSTE FAEELLSLVSMLVSSTPGSLALQEAGFIPTILPLLKDTDTHHLHLVSTAVHVIEGFLD YHNPSSALFRDLGGLDDTIARLKIEVSQVDIGSKKSEEPQSMSKGKEVESSLPPPDMQ TVHSEALISYNRRNLMKALLRTISLATYVPGSSARVDGSEENVLPPCLCTIFRRAKEF GGGVFSLAATVMSDLIHKDPTCFTVLDAAGLPQAFIDAIMGGILYNSDAITCIPQCLD ALCLNSSGLQLVKDHNALRCFVKIFTSRSYLKALGGDTAGALSLGLDELLRHQSSLRS SGVDMLIEILNTISKVGCGGESSSCTESGNSSTPLPMETDVQGGTSRSEVGTSEVGSS EKMVDASLDATSSSIESYLPECICNVGRLIETILQNSDTCRLFSEKKGIEAVLQLFKL PLMPVSVSVGQSISVAFKNFSSQHSVSLARAVCSFCRDHLKLTNGLLGSVSGTKLVIS DHVKQSPLLKALSSLEGLLSLCNFLLKGNAFMVSELAFADAEILRELGKVYIEVTWQI SLLSDSKVEKQDMEQDDVPGDASVSNLSERDSDDDTNAASVTRHMNPVSVRTSSVSPW NMEQDIISAVRSAASIHRHGRHTLSRIRGRLSGAMDAAHTDIDSPFSPGESSQSHDTI KKSPDVVVSELLTKLGHTMRSFLSTLVKGLPARRRADSSLTPASRSLVIALAQLFLTA LGYSGHSTAGFEMSLSVKCRYLGKVVEDMAALTFDSRRRSCNSAIVNSFYVNGTFKEL LTTFEATSQLLWTLPFSVPTTGSDQASSISEKVSHNSWLLDTLQSYCKLLEYCVNSSF LLSPSHNQLLVQPMVTELSINLFPVPSEPESFVRILQSQVLEAVLPVWNHTMFPECSP SLITSLISIVSHICSGVGALKQSRAGVGAANQRLTSPPLDESSIATIVEMGFSRARAE EALRSVRTNSVEMATDWLFSHPEEFVQEDVQLAQALALSLGNTTEASKEDGCNKNGPS VVEDKGVILLPLDDILAVSTKLFSSGDDMAFPLTDLLVTLCNQNKGDDRQPVILYLFE QLKRFPSDSSVDAGALYSFARLLALLLSEDSSIREIGAENGVVPHVLNLLENLKSRTE KTDQTWNSISALLLIL</aaseq> |
| Gene Sequence |
<dnaseqindica>2..3662#tattcgcctttctgcttttatcgttcttgtgcaggcaagccatgactcagaaagcctagcattgtttttgaacaacgaaccagaattcattgatgaattattatcgttactaagctatgaagatgagataccggagaaaattaggagattggggatcctttcgttggttgctttgtgccaagataggtcacatcaacctactgttttgtcctcagtaacttctggtggtcatcgtggtatccttcccagtctcatgcaaaaggcagtggattcaatcatcaatggttcgacaaaatggtccacagaatttgctgaagagcttctatctcttgtctccatgttggtatcatcaactccaggttctttagctcttcaagaagcaggctttatacccactattttacccctcctcaaagacacagacacacatcatctacatctagttagtactgcagtacatgtcattgagggcttcttggattaccacaacccttcttctgcattgttcagagatctaggtggtctagatgacactattgcacgcttaaaaatagaagtgtcgcaggttgatattggttcaaagaaatcagaagaacctcagtctatgagtaaaggtaaagaagttgaaagtagtttgcctccgccagatatgcagactgttcattctgaagcgttaatttcttataatcgaaggaacttaatgaaagccttattgcgtaccatatctctggcaacatatgtgcccggtagctctgctcgtgttgatggttcagaagagaatgtattgcctccttgtttatgcaccatatttaggagagccaaggagttcggtggtggggtgttctcacttgctgctaccgtcatgagtgatctcatacacaaagatccaacttgctttactgtccttgatgcagctggtttgccgcaagccttcattgatgccatcatgggtggcattctttataattctgatgctatcacatgtataccacagtgtttggacgcactttgcttaaacagcagtgggcttcagttagtaaaggaccacaacgctttaagatgctttgtgaaaatctttacttccagatcatatctgaaagctctgggtggggacactgcaggggctttatcacttggacttgatgaattattgcgtcatcaatcgtcactgcgatcttctggagtggacatgcttattgaaatcttgaacaccatctcaaaagttgggtgtggcggagagtctagttcttgtacagaatctggtaactcctctacgccacttcccatggaaactgatgtgcagggaggtacttcaaggagtgaggttggaacttctgaggtgggaagttctgagaagatggtagatgcttccctagatgcaacatcatcgtcaatcgagtcatatcttcctgaatgcatatgcaatgttggtcgtcttattgaaactattctgcaaaattctgacacgtgtaggttgttcagtgagaaaaagggcattgaagctgttcttcagctgttcaaattgccattaatgccggtatctgtttcagttggacagagtatttcagttgcttttaaaaacttctcatctcagcattcagtttctctcgccagagcagtttgctcattctgtagagatcatcttaagctgactaatggactgctgggttcagtttctggaactaagctggttattagtgatcatgtgaagcaatcacctctcctgaaagcactttccagtcttgaagggttattgtctctttgcaattttcttctgaagggaaacgccttcatggtctcagaactggcttttgctgatgctgagatattgagggaactaggtaaggtttatattgaggtcacatggcagatatctttacttagtgattccaaggtggagaagcaagacatggaacaagatgatgtgcctggagatgcctcagtctcaaatttatctgaaagggatagtgatgatgacacaaatgcagcatcagttacaagacatatgaatcctgtttcagtgagaacgtcctctgtatcaccatggaatatggaacaagatattatatcagcagtgcgttctgctgccagcatacatcgccatggtcggcacacgctatcaaggatacgtggtcgccttagtggagctatggatgcagcacatactgatatagacagtcctttttctccaggagaaagttcacaaagtcatgatactataaaaaagagtcctgatgttgttgtttctgaactcctgacgaagcttggacacacgatgcgttccttcctttctacccttgtcaaaggattaccagctcgccgtcgtgctgactcaagtctgactccagcctctcgaagtcttgtgattgctcttgcacaactttttcttactgctcttggttattctggacattctactgctggctttgagatgtcattatctgtgaaatgccgatatcttgggaaagttgtggaagacatggcagcacttacctttgacagcaggcgtcgatcttgcaattctgcaatagttaatagtttctatgtgaacggaacattcaaggagcttctaaccaccttcgaagctaccagtcagttactttggacactacctttctcagtcccaactactggctcagaccaagcttcctctatcagtgaaaaggtgtctcacaattcatggctgctggatacattacagagttactgtaaattgctggaatattgtgtgaactcttcatttttattgtctccttctcataatcagcttcttgttcagcctatggtcactgaactgtccattaatctgttccctgtgccctcagagcctgaatcatttgttcgtattctgcaatctcaagttttggaagcagtcctacctgtttggaatcatacaatgttccccgagtgtagcccgtctcttatcacttccttgatctccattgttagccatatatgctctggtgttggtgctctaaaacaaagccgtgcaggtgttggagctgcgaaccagcgtcttacgagtccccctcttgatgagtcctctattgctacaattgttgagatgggattttcgcgagctagggcagaagaagccctaagaagtgtcagaactaacagtgtcgaaatggcaacagattggttgttcagccatccagaagagtttgttcaagaagatgtccagcttgcacaggcattagctttgtcacttggaaacaccactgaagcatccaaggaagatggttgcaataagaatggtccaagtgtcgttgaagataaaggtgtcatcttgcttcctttggatgacattcttgctgtatcaacaaagctcttctcttctggtgatgacatggctttcccattgactgatcttttagttacactgtgcaaccagaataagggagatgaccgtcagccggttatcttatatctttttgagcaacttaaacgttttccatcagattcttcagttgatgcaggcgcattatattcttttgcccgtttgctggccttacttctgagtgaagacagtagcattcgtgaaattggtgcagaaaatggcgtggtccctcatgttcttaatttattggaaaaccttaaatcaaggacagagaaaacagatcaaacttggaattctatcagtgctttgttgcttatattgg</dnaseqindica> |
| External Link(s) |
