Difference between revisions of "Os04g0634400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0634400| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001060534.1 GI:115460797 GeneID:433712...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0634400|
 
GeneName = Os04g0634400|

Revision as of 20:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0634400

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001060534.1 GI:115460797 GeneID:4337123

Length

3485 bp

Definition

Oryza sativa Japonica Group Os04g0634400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32671896..32675380

Sequence Coding Region

32671896..32672192,32672282..32672414,32672497..32672728,32672843..32673059,32673217..32673341
,32674039..32675380

Expression

GEO Profiles:Os04g0634400

Genome Context

<gbrowseImage1> name=NC_008397:32671896..32675380 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32671896..32675380 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggtcaaccaggcaatcgtctaacctactccgcctggtcgccttcttcttcctcctctccggccaaacgtcggccgccgccgccgcgggcgtcgccgacaagctcgacaagggccagaacctcaccgacggccagacgctcgtctcgtccggcggcggctcgtacactctggggttcttctctcccgggaagtcgaccaagagatacctcggcatatggttcaccgtgtccggcgacaccgtctactgggtagccaaccgtgaccgccccctcgacggcaagtccggcgtgctgctgctcaacgacgatggcagccagctcgtcctgctcgacggcggctctcgccggacggtgtggtccgcgagcttcttggccgcctctgccgcggtggttcagcttctcgactccggcaacctcgtcgtgcgcaatggcagcggcggcgacgcctacctgtggcagtcgttcgaccagccgtcggacacgctgctgcccggcatgaagatgggcaagagcctgtggagcgggcaggagtggttcatcacggcgtggcgctccgctgacgacccgtcgccgggcgactaccgccgcacgctggccacggacggcctaccggagctcgtcctgtggcgaggcggcggcggcggcggcgccaccaaggtgtaccgcacgggcccgtggaacggcaggttcttcaacggcgtcccggaggcgtccaactactccgacaagttcccgctgcaggtgacgtccagcgcgagggaggtgacctacggctacggatcggtcgccacggccggcgccgcgccattgacgcgcgtcgtggtgaactacaccggcgtggtcgagcgcctcgtgtgggtcgcgagcagccgggcatggcagcgattcttccagggcccgagggacccctgcgacagctacgcgcggtgcgggccgttcggcctgtgcgacgccgacgccgcggcgacgtcgttctgcggctgcgtggatgggttcaccgccgcgtcgccgtcggcgtgggcgttgcggaacacctccggtgggtgccggcgaggcgtggcgctggactgcgccggcggcggcggcgggagcaggacgacggacaagttcaaggtggtgcggggggtgaagctgccagacacgcgcaacgcgtcggtggacatgggcgccacggcggcggagtgcgagcggaggtgcctgggaaactgctcgtgcgtggcctacgccgccgccgacatcaacggcggcggctgcgtcatttggacggacgacatcgtcgatcttcgctacgttgaccgcgggcaggatttgtacctgagattggctaagtctgaatttgatgttattccagataacccttctatgggcgttgcttcagtcaatctagctactataaagtctattactgaaaatttctcagaaaattgcttgattggtgaaggtggatttagcaccgtttataagggagtacaatctgacgggagaatggtagccgtgaagaggctaaagcagtcagctctgacgaacaaaggcaagaaggatttcgccagagaagtggcagtgatggccgggctccatcacggtagccttctccgcctcctagcttactgcaacgaaggcaatgagcgtatactggtatacgcctacatgaagaacaagagcttggacaaccacattttcggcccgttgccgcgtcgagctaatctgcactggagaagaagactcgacataattcaggccatcgcgaaaggtgtcgcgtatcttcacgaaggaccagacgggagtgtaatccacagggatctcaagctgagcaacattcttctagacgacgaattgaagcctaagattgcagactttggcaccgccaagctgttcgtcgccgatcagtcaggccagaccctcgtggtctcacaaggttatgcatctccggagtacgcgttacgagacgagatgacgctcaagtgcgacgtctacagcttcggagtcgtcctcctggagacgctcagcggcgttcgcaacggctcaatgcagacgcttcttccacaggcatggaggttgtgggaacagggcaacctcatggacctccttgacccggcaatggcgaggcctgcacccgacgatgcagagctcctgtacgatctagaacggtgcatccacatcgggcttctttgcatccaggacatggcggacgataggccgaccatgtccgaaatcgtcgccatgctgacgagcaggacgtcgcagatggagcagcccaagagaccgacacttgacagcagagccgccatgcgtccgcttcgtcagagtgatgtccaaggctcaaccacaaccgatctcacctaa</cdnaseq>

Protein Sequence

<aaseq>MRSTRQSSNLLRLVAFFFLLSGQTSAAAAAGVADKLDKGQNLTD GQTLVSSGGGSYTLGFFSPGKSTKRYLGIWFTVSGDTVYWVANRDRPLDGKSGVLLLN DDGSQLVLLDGGSRRTVWSASFLAASAAVVQLLDSGNLVVRNGSGGDAYLWQSFDQPS DTLLPGMKMGKSLWSGQEWFITAWRSADDPSPGDYRRTLATDGLPELVLWRGGGGGGA TKVYRTGPWNGRFFNGVPEASNYSDKFPLQVTSSAREVTYGYGSVATAGAAPLTRVVV NYTGVVERLVWVASSRAWQRFFQGPRDPCDSYARCGPFGLCDADAAATSFCGCVDGFT AASPSAWALRNTSGGCRRGVALDCAGGGGGSRTTDKFKVVRGVKLPDTRNASVDMGAT AAECERRCLGNCSCVAYAAADINGGGCVIWTDDIVDLRYVDRGQDLYLRLAKSEFDVI PDNPSMGVASVNLATIKSITENFSENCLIGEGGFSTVYKGVQSDGRMVAVKRLKQSAL TNKGKKDFAREVAVMAGLHHGSLLRLLAYCNEGNERILVYAYMKNKSLDNHIFGPLPR RANLHWRRRLDIIQAIAKGVAYLHEGPDGSVIHRDLKLSNILLDDELKPKIADFGTAK LFVADQSGQTLVVSQGYASPEYALRDEMTLKCDVYSFGVVLLETLSGVRNGSMQTLLP QAWRLWEQGNLMDLLDPAMARPAPDDAELLYDLERCIHIGLLCIQDMADDRPTMSEIV AMLTSRTSQMEQPKRPTLDSRAAMRPLRQSDVQGSTTTDLT</aaseq>

Gene Sequence

<dnaseqindica>3189..3485#2967..3099#2653..2884#2322..2538#2040..2164#1..1342#atgaggtcaaccaggcaatcgtctaacctactccgcctggtcgccttcttcttcctcctctccggccaaacgtcggccgccgccgccgcgggcgtcgccgacaagctcgacaagggccagaacctcaccgacggccagacgctcgtctcgtccggcggcggctcgtacactctggggttcttctctcccgggaagtcgaccaagagatacctcggcatatggttcaccgtgtccggcgacaccgtctactgggtagccaaccgtgaccgccccctcgacggcaagtccggcgtgctgctgctcaacgacgatggcagccagctcgtcctgctcgacggcggctctcgccggacggtgtggtccgcgagcttcttggccgcctctgccgcggtggttcagcttctcgactccggcaacctcgtcgtgcgcaatggcagcggcggcgacgcctacctgtggcagtcgttcgaccagccgtcggacacgctgctgcccggcatgaagatgggcaagagcctgtggagcgggcaggagtggttcatcacggcgtggcgctccgctgacgacccgtcgccgggcgactaccgccgcacgctggccacggacggcctaccggagctcgtcctgtggcgaggcggcggcggcggcggcgccaccaaggtgtaccgcacgggcccgtggaacggcaggttcttcaacggcgtcccggaggcgtccaactactccgacaagttcccgctgcaggtgacgtccagcgcgagggaggtgacctacggctacggatcggtcgccacggccggcgccgcgccattgacgcgcgtcgtggtgaactacaccggcgtggtcgagcgcctcgtgtgggtcgcgagcagccgggcatggcagcgattcttccagggcccgagggacccctgcgacagctacgcgcggtgcgggccgttcggcctgtgcgacgccgacgccgcggcgacgtcgttctgcggctgcgtggatgggttcaccgccgcgtcgccgtcggcgtgggcgttgcggaacacctccggtgggtgccggcgaggcgtggcgctggactgcgccggcggcggcggcgggagcaggacgacggacaagttcaaggtggtgcggggggtgaagctgccagacacgcgcaacgcgtcggtggacatgggcgccacggcggcggagtgcgagcggaggtgcctgggaaactgctcgtgcgtggcctacgccgccgccgacatcaacggcggcggctgcgtcatttggacggacgacatcgtcgatcttcgctacgttgaccgcgggcaggatttgtacctgagattggctaagtctgaatttggtatgtgcattgctttattttcaattttatcttgaaagattatgttctaaaacaataatgaaaatgggtttcaatccgagcctatattttgaatgaaaatgaccccagataaaagattagcgaaagaaatgtcaaagtaacagttcttttttttaacaaagtaacgatcctgatgtcaccgtaaaagaaatgccgacatatgatactctctcgaatataagtcactctcaccttttctttttcctattcaaacttttttaagtttaatttagtttatagaaaaatataacaatattttcaatacaaataaacatattatcaaaatattttaatattatatttaatgaacctaattgatgtcgcaatctcttttaattttttatataaatttgatttaatctaaagaagttttaactagaaaagtcagcgaagggagtaattctgagcatgaactgatctctctctatgtctttttttttttgtctgagtaacagttgagaccaaaaggtctctgattgtactagttgtcccacctgtagctgctaccattgctattcttttgatcgcttttggggtttgggctatttggtgcaaaaagaatcacggaattttaggtaaatccaggcttttaatcttaaggatatttattatgaagttctaagctaacaaactgtatgctaaattgctaataccacagatgttattccagataacccttctatgggcgttgcttcagtcaatctagctactataaagtctattactgaaaatttctcagaaaattgcttgattggtgaaggtggatttagcaccgtttataaggtgagcctctctcttcagaagatagacacatgtaacatgaaagttgcactaatcctcatgaaaaaagaaattaaacataagttgcaaatacttaataccgtacactggcaaatgccaaaaatgcaattgcaatcacctgaaatttggaaatgaccagggagtacaatctgacgggagaatggtagccgtgaagaggctaaagcagtcagctctgacgaacaaaggcaagaaggatttcgccagagaagtggcagtgatggccgggctccatcacggtagccttctccgcctcctagcttactgcaacgaaggcaatgagcgtatactggtatacgcctacatgaagaacaagagcttggacaaccacattttcggtacccaccctgttctatctgaattcagcttattaagctacatcactgacctgatcataaattcaccatgacatgaataaataatgtcaccttccatgttcttcttcatttcaggcccgttgccgcgtcgagctaatctgcactggagaagaagactcgacataattcaggccatcgcgaaaggtgtcgcgtatcttcacgaaggaccagacgggagtgtaatccacagggatctcaagctgagcaacattcttctagacgacgaattgaagcctaagattgcagactttggcaccgccaagctgttcgtcgccgatcagtcaggccagaccctcgtggtctcacagtaagtaaactaatggctgttcctagtagcaatgttgctcaagttttgatttgaagccttgaattgaattcgtgaattgaagaggttatgcatctccggagtacgcgttacgagacgagatgacgctcaagtgcgacgtctacagcttcggagtcgtcctcctggagacgctcagcggcgttcgcaacggctcaatgcagacgcttcttccacaggtaatcaagcagtgcactgaacacatcaaatcttcattgcaagacaatggcatttggatccttcagttagacctctttcgtgcatacaggcatggaggttgtgggaacagggcaacctcatggacctccttgacccggcaatggcgaggcctgcacccgacgatgcagagctcctgtacgatctagaacggtgcatccacatcgggcttctttgcatccaggacatggcggacgataggccgaccatgtccgaaatcgtcgccatgctgacgagcaggacgtcgcagatggagcagcccaagagaccgacacttgacagcagagccgccatgcgtccgcttcgtcagagtgatgtccaaggctcaaccacaaccgatctcacctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0634400, RefSeq:Os04g0634400