Difference between revisions of "Os04g0636000"

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(Created page with "{{JaponicaGene| GeneName = Os04g0636000| Description = SPla/RYanodine receptor SPRY domain containing protein| Version = NM_001060548.2 GI:297603418 GeneID:4337138| Length...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0636000|
 
GeneName = Os04g0636000|

Revision as of 20:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0636000

Description

SPla/RYanodine receptor SPRY domain containing protein

Version

NM_001060548.2 GI:297603418 GeneID:4337138

Length

3365 bp

Definition

Oryza sativa Japonica Group Os04g0636000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32746946..32750310

Sequence Coding Region

32747243..32747349,32747661..32748339,32748445..32748555,32748636..32748694,32748792..32748900
,32749016..32749204,32749279..32750045,32750130..32750262

Expression

GEO Profiles:Os04g0636000

Genome Context

<gbrowseImage1> name=NC_008397:32746946..32750310 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32746946..32750310 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgccggagcgggaggaggaggaggccgcgcgatcgcctccgccgaagcgcccccgccgcgacggtgacgccccgccggaaccccagcctgcccgcgtgggcctcaacccggcggactgcgacctcgatttcgacgtcggcggcggcgggctccggggggaggcgctgcatgatggcgggttcgcctactgctggtcgggcgcgcgcgccacggtgggcgtgaggggtggcgggaagtactgcttcgggtgcaaggtcgtcgccgagcaggccgtggagatggaggacacggccgcggaccagcagcacctctgccgcgtcggggtctcgaggggcggcgaccccgtgggggccctcggggagaccggccacagcttcgggtttgggggcacggggaaattctcccaccagggcaagtttgtggagtatggcgtcaagtttggggttggggatacggttgtctgcgccgtggaccttgattccaagccgttggcgtcgatcgggttctccaggaatggggagtggcttggcattgccaagcacttcgatgcaagtgacaaagggctgggtttggttgaatctcctgtgagctcaatgcaatgggagtcggcaatctttccacatgtgttgctgaagaatgttgttgtcgagatgcaattcagcaaggaggatggattgcagcttgttgatggttatgagctctggccctcagcttgtgtcgatgggaatgcggtatctggccctgtgtttgcagaacaaaaagagtgtgaaatcatgatgatggttggtctcccagcttcagggaagtcaacatgggcagagaagtgtatcaaggagcacaaggagaagcgctttatccttctcgggactaatcttgcattggtgcaaatgaaggtgccaggattgctgcgtaagaataactacggtgaacgctttgaacgtttgatggatcgtgccacaatgattttcaacacattgctgaccagggctgcgaagatccctcgcaactacatcatcgatcagactaatgtttacaaaaatgcccgtagtcgcaaactaaggccatttgcaaactaccgtaagactgctgtggttgtgttcccatcgccaagtgaactcaaggtccgggcagcaaagcgtttcaaggaaatggggaaggatgtgccagctgatgcagtaaatgagatgacagctaatttcgtcttaccactgtccaaggacatgcctgattctaaagagccctttgacgaggtaatctttgtagagctttccagggatgaagcccagagaaacctggatgagatgaaacgtttgctgccaaaagcctcaactcccagctatgccaatttcagtaaccaaaatgtgagctcaacatatagtgggactattgctgggacaatgccatctctgtcaccaggttatcaccgacaaatggacagtccatatggaagtggtgtgcagacaccaagggccttgacacaccaacaggcagcatggggtgttcagggtttccagagtccagcagggattaaccaccatcaagtccacttaagcagctacccaaataccccataccaacatcaacaaatccaatcaaaccatccaagcaccccataccaacatcaagcccaatcgacaagctacccaagtaccccttatcaagatcaaattcactcgagctacccaagtaacccaacccaacatcaaattcatctgaactaccccagtaccccaaaccaataccaaagccattcaacatatccaaataccccatttcccggtcatggaaatagcgtatatgattccaatggtggcccaggtccatacaatcctaatccttacagcatgaacaccgatatgcaacaaagaattcaagctcccattggtgacaggaaccagtcctatgcagttgtgtcaaatgaagcctatgggagatctggctatgaagcggcaaattctgttggaaggcctatcaatacacatcctgccgtgtacnattctggcagtggcaattacatgccctatatgcagcattctcacgatgtgcacaactctggatcacagtactcagctccagtccccaggcctccttacggagctcctccacctaactatatgaatccacagacgagcatttggcatatctag</cdnaseq>

Protein Sequence

<aaseq>MASPEREEEEAARSPPPKRPRRDGDAPPEPQPARVGLNPADCDL DFDVGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAAD QQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVD LDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAIFPHVLLKNVVV EMQFSKEDGLQLVDGYELWPSACVDGNAVSGPVFAEQKECEIMMMVGLPASGKSTWAE KCIKEHKEKRFILLGTNLALVQMKVPGLLRKNNYGERFERLMDRATMIFNTLLTRAAK IPRNYIIDQTNVYKNARSRKLRPFANYRKTAVVVFPSPSELKVRAAKRFKEMGKDVPA DAVNEMTANFVLPLSKDMPDSKEPFDEVIFVELSRDEAQRNLDEMKRLLPKASTPSYA NFSNQNVSSTYSGTIAGTMPSLSPGYHRQMDSPYGSGVQTPRALTHQQAAWGVQGFQS PAGINHHQVHLSSYPNTPYQHQQIQSNHPSTPYQHQAQSTSYPSTPYQDQIHSSYPSN PTQHQIHLNYPSTPNQYQSHSTYPNTPFPGHGNSVYDSNGGPGPYNPNPYSMNTDMQQ RIQAPIGDRNQSYAVVSNEAYGRSGYEAANSVGRPINTHPAVYXSGSGNYMPYMQHSH DVHNSGSQYSAPVPRPPYGAPPPNYMNPQTSIWHI</aaseq>

Gene Sequence

<dnaseqindica>2962..3068#1972..2650#1756..1866#1617..1675#1411..1519#1107..1295#266..1032#49..181#ctctctctttctctctctcgcctcgcgaaacccagcgagccctagccgatggcctcgccggagcgggaggaggaggaggccgcgcgatcgcctccgccgaagcgcccccgccgcgacggtgacgccccgccggaaccccagcctgcccgcgtgggcctcaacccggcggactgcgacctcggtacgcacggttcttcctttgcaggttgcaatcgatcacgcgctctgctcaccactccctcttccgttgctgtgtggcggccagatttcgacgtcggcggcggcgggctccggggggaggcgctgcatgatggcgggttcgcctactgctggtcgggcgcgcgcgccacggtgggcgtgaggggtggcgggaagtactgcttcgggtgcaaggtcgtcgccgagcaggccgtggagatggaggacacggccgcggaccagcagcacctctgccgcgtcggggtctcgaggggcggcgaccccgtgggggccctcggggagaccggccacagcttcgggtttgggggcacggggaaattctcccaccagggcaagtttgtggagtatggcgtcaagtttggggttggggatacggttgtctgcgccgtggaccttgattccaagccgttggcgtcgatcgggttctccaggaatggggagtggcttggcattgccaagcacttcgatgcaagtgacaaagggctgggtttggttgaatctcctgtgagctcaatgcaatgggagtcggcaatctttccacatgtgttgctgaagaatgttgttgtcgagatgcaattcagcaaggaggatggattgcagcttgttgatggttatgagctctggccctcagcttgtgtcgatgggaatgcggtatctggccctgtgtttgcagaacaaaaagagtgtgaaatcatgatgatggttggtctcccagcttcagggaagtcaacatgggcagagaagtgtatcaaggagcacaaggagaagcgctttatccttctcgggactaatcttgcattggtgcaaatgaaggttcctatgcttgtttcacaacttgcatgctctatgatttccactattttcagtttatgactttccttttgcaggtgccaggattgctgcgtaagaataactacggtgaacgctttgaacgtttgatggatcgtgccacaatgattttcaacacattgctgaccagggctgcgaagatccctcgcaactacatcatcgatcagactaatgtttacaaaaatgcccgtagtcgcaaactaaggccatttgcaaactaccgtaaggtaagctgcgaaaggataacagtttcacagtttgccgtgttgttgctgaattaataaatgtcaatgttggatgcgtttgtggggtgtttaatttcatatacttgttgtgcaacagactgctgtggttgtgttcccatcgccaagtgaactcaaggtccgggcagcaaagcgtttcaaggaaatggggaaggatgtgccagctgatgcagtaaatgagatgacaggtatccagccaaatccatcactgctatctcgaaatgttcattgtctatgttctatgcatcaattacttactatattgccataaacacctattttcagctaatttcgtcttaccactgtccaaggacatgcctgattctaaagagccctttgacgaggttgcttggcattgctgtactccatcttttggttactatcaagtttttccttagctcattacacttttcaacatgtgcaggtaatctttgtagagctttccagggatgaagcccagagaaacctggatgagatgaaacgtttgctgccaaaagcctcaactcccagctatgccaatttcagtaaccaaaatgtatgttaccattattgctgcttatggatttggtcctatgttttgtcatcatgggttagcttgatcttttgattcatgtacaagtcctaacgtagatgcttacaggtgagctcaacatatagtgggactattgctgggacaatgccatctctgtcaccaggttatcaccgacaaatggacagtccatatggaagtggtgtgcagacaccaagggccttgacacaccaacaggcagcatggggtgttcagggtttccagagtccagcagggattaaccaccatcaagtccacttaagcagctacccaaataccccataccaacatcaacaaatccaatcaaaccatccaagcaccccataccaacatcaagcccaatcgacaagctacccaagtaccccttatcaagatcaaattcactcgagctacccaagtaacccaacccaacatcaaattcatctgaactaccccagtaccccaaaccaataccaaagccattcaacatatccaaataccccatttcccggtcatggaaatagcgtatatgattccaatggtggcccaggtccatacaatcctaatccttacagcatgaacaccgatatgcaacaaagaattcaagctcccattggtgacaggaaccagtcctatgcagttgtgtcaaatgaagcctatgggagatctggctatgaagcggcaaattctgttggaaggcctatcaatacacatcctgccgtgtacnattctggcagtggcaattacatgccctatatgcagcattctcacggtaagtggctagctcaggctctttcttttcacttcattttgttacaagctaattcaacttggtggattacagattcactagacaactcttaaaattacgaagtgagaaaaataagctctgtaactagaaacttttatagcacatttgagtacattagcactcatcatcatagggttctttgacctattaattggctacttggaattagagattatgttgctacccgtgaagtaaaactacagatctttctttgactgacagtgtgctaacattgaagtaaaactaacacatctttctttgactgacaacagatgtgcacaactctggatcacagtactcagctccagtccccaggcctccttacggagctcctccacctaactatatgaatccacagacgagcatttggcatatctagcaaggcagctaatttgtggcgataagcgaacactggacatggtaccaagaaaagtagtttaagtagatatgcgcgagtgcgtgacctataggttccagggaacctttggcagttcggctcgcagatttttgtatagttatatgcacgcataaaccattctccgtatgtatccagtttacgacttttgcatgatcaattagtattggtttggccaccgcagagtgttactgtcgtgaacaactttcggacgctcggtcaggtacgcctgaatcatgaaaacgtatattctagtctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0636000, RefSeq:Os04g0636000