Difference between revisions of "Os02g0759800"
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==Annotated Information== | ==Annotated Information== | ||
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| + | ===Function=== | ||
| + | OsSKIPa has evolved a specific function in positive modulation of stress resistance through transcriptional regulation of diverse stress-related genes in rice. | ||
===Expression=== | ===Expression=== | ||
| − | + | The OsSKIPa-overexpressing rice showed significantly increased reactive oxygen species-scavenging ability and transcript levels of many stress-related genes, including SNAC1 and rice homologs of CBF2, PP2C, and RD22, under drought stress conditions. More than 30 OsSKIPa-interacting proteins were identified, but most of these proteins have no matcheswith the reported SKIP-interacting proteins in animals and yeast. Together, these data suggest that OsSKIPa has evolved a specific function in positive modulation of stress resistance through transcriptional regulation of diverse stress-related genes in rice. | |
===Evolution=== | ===Evolution=== | ||
| − | + | Abiotic stresses are major limiting factors for growth, development, and productivity of crop plants. Here, we report on OsSKIPa, a rice homolog of human Ski-interacting protein (SKIP) that can complement the lethal defect of the knockout mutant of SKIP homolog in yeast and positively modulate cell viability and stress tolerance of rice. | |
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You can also add sub-section(s) at will. | You can also add sub-section(s) at will. | ||
Revision as of 08:18, 1 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
OsSKIPa has evolved a specific function in positive modulation of stress resistance through transcriptional regulation of diverse stress-related genes in rice.
Expression
The OsSKIPa-overexpressing rice showed significantly increased reactive oxygen species-scavenging ability and transcript levels of many stress-related genes, including SNAC1 and rice homologs of CBF2, PP2C, and RD22, under drought stress conditions. More than 30 OsSKIPa-interacting proteins were identified, but most of these proteins have no matcheswith the reported SKIP-interacting proteins in animals and yeast. Together, these data suggest that OsSKIPa has evolved a specific function in positive modulation of stress resistance through transcriptional regulation of diverse stress-related genes in rice.
Evolution
Abiotic stresses are major limiting factors for growth, development, and productivity of crop plants. Here, we report on OsSKIPa, a rice homolog of human Ski-interacting protein (SKIP) that can complement the lethal defect of the knockout mutant of SKIP homolog in yeast and positively modulate cell viability and stress tolerance of rice. You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os02g0759800 |
|---|---|
| Description |
Similar to GAMYB-binding protein (Fragment) |
| Version |
NM_001054719.1 GI:115448808 GeneID:4330796 |
| Length |
2353 bp |
| Definition |
Oryza sativa Japonica Group Os02g0759800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:32882205..32884557 |
| Sequence Coding Region |
32882604..32884427 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:32882205..32884557 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:32882205..32884557 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtccctcaaggagctcctcccgacgcccaaggcggcggcgtcgacgttctacgaccacagcagcgacccgtggttcaaggagcggtatggcggggagtcggcgcaatccgacgcggcggcggcggcggcgaagccttcgggccccgccaagcccgtgccgccgtacgggaagcgtggcgggttcgtgccgcggcggccggaggacttcggggacggcggcgccttcccggagatccacgtcgcgcagtacccgctcggcatgggccggcgcgacgagaagggcggctcgaagatcctcgcgctcaccgtcgacgccaagggcagcgtcgccttcgacgccgtcgtgaagcagggtgagaacgcctctaagatcgtttactcaaagcacagcgacctcgtgcccaagattgccacggctgattccgaggcaaccgcggacgacgaggagtaccagaaacagatcgaagaaaccactgaacgaactaaagctgccttggagaaggttgtcaatgttcggctctccgccgcacagcccaagaatgtgccgacgcatgattcagagtcaaagtttatcaagtataagccatcgcagcaatcggcagccttcaattcaggtgccaaggagaggattattaggatgtcagagatggctcaggatcctcttgagccaccgaaattcaagcataagcgagtgccccgcgcttctggatcaccgcctgtcccagtgatgcactcgccaccacggccagtgacagtgaaggaccagcaagattggaagattccaccatgcatttcaaattggaaaaatccaaagggttacaccataccactcgacaagaggttggcagctgatggaagggggctgcaggaggttcaaattaatgataactttgcaaagctctctgaagcactgtatgtggcggagcagaaggccagggaggcagtacagatgcgatccaaggtgcagagggagctgcagctgaaggagaaggagaggaaggagcaagagctaagggcacttgcacagaaggcgcgcatggagaggactggtgccccacctgcacctacaggggttcctgctggtggtggtagaggtgctgttgatgacagggaggaagatatggatttggagcagcctcgtgagcaacgaagggagagtagagaagaaagggaagcaaggattgagcgtgacaggattcgtgaggagaggagacgtgagagggagagagagaggaggctggaggccagggatgctgcaatgggcaagaagagtaagctcactagagacagggatcgtgatgtcagtgagaagattgccctgggcatggcaagcactggcggtgctaaaggtggggaagtcatgtatgaccagaggttgttcaaccaggataaaggaatggactctgggtttgctacagatgatcagtataacatctactccaagggtctcttcacagcgcagccaacgctatccacactttacaggcctaagaaggacggtgattctgatgtgtatggcgatgcagatgaacaactggagaaggttatgaagacagataggttcaaaccagacaaaggattttctggtgcttcagagaggtctggaaagagagacagacctgtggagtttgataaacaggaggagaatgatcccttcggtcttgatcagttcttgactgaagtgaagaaggggaagaaagctgttgagaagattggaagcggaggagccatgagggcaagtggtggatcctcaatgagagatgattacgagggtggaggatctgggaggtcccgcattaactttgaaagaggtcgttga</cdnaseq> |
| Protein Sequence |
<aaseq>MASLKELLPTPKAAASTFYDHSSDPWFKERYGGESAQSDAAAAA AKPSGPAKPVPPYGKRGGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRRDEKGGSKILA LTVDAKGSVAFDAVVKQGENASKIVYSKHSDLVPKIATADSEATADDEEYQKQIEETT ERTKAALEKVVNVRLSAAQPKNVPTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEM AQDPLEPPKFKHKRVPRASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYT IPLDKRLAADGRGLQEVQINDNFAKLSEALYVAEQKAREAVQMRSKVQRELQLKEKER KEQELRALAQKARMERTGAPPAPTGVPAGGGRGAVDDREEDMDLEQPREQRRESREER EARIERDRIREERRRERERERRLEARDAAMGKKSKLTRDRDRDVSEKIALGMASTGGA KGGEVMYDQRLFNQDKGMDSGFATDDQYNIYSKGLFTAQPTLSTLYRPKKDGDSDVYG DADEQLEKVMKTDRFKPDKGFSGASERSGKRDRPVEFDKQEENDPFGLDQFLTEVKKG KKAVEKIGSGGAMRASGGSSMRDDYEGGGSGRSRINFERGR</aaseq> |
| Gene Sequence |
<dnaseqindica>131..1954#atcgcgttgcccaaataattacacgaatcgaaccaaaccctagcttttcctcttcgattcccgatcccccacccagcgactcgccggaaccctagccctagatcccgcgcggcttgccgccgtgctagccatggcgtccctcaaggagctcctcccgacgcccaaggcggcggcgtcgacgttctacgaccacagcagcgacccgtggttcaaggagcggtatggcggggagtcggcgcaatccgacgcggcggcggcggcggcgaagccttcgggccccgccaagcccgtgccgccgtacgggaagcgtggcgggttcgtgccgcggcggccggaggacttcggggacggcggcgccttcccggagatccacgtcgcgcagtacccgctcggcatgggccggcgcgacgagaagggcggctcgaagatcctcgcgctcaccgtcgacgccaagggcagcgtcgccttcgacgccgtcgtgaagcagggtgagaacgcctctaagatcgtttactcaaagcacagcgacctcgtgcccaagattgccacggctgattccgaggcaaccgcggacgacgaggagtaccagaaacagatcgaagaaaccactgaacgaactaaagctgccttggagaaggttgtcaatgttcggctctccgccgcacagcccaagaatgtgccgacgcatgattcagagtcaaagtttatcaagtataagccatcgcagcaatcggcagccttcaattcaggtgccaaggagaggattattaggatgtcagagatggctcaggatcctcttgagccaccgaaattcaagcataagcgagtgccccgcgcttctggatcaccgcctgtcccagtgatgcactcgccaccacggccagtgacagtgaaggaccagcaagattggaagattccaccatgcatttcaaattggaaaaatccaaagggttacaccataccactcgacaagaggttggcagctgatggaagggggctgcaggaggttcaaattaatgataactttgcaaagctctctgaagcactgtatgtggcggagcagaaggccagggaggcagtacagatgcgatccaaggtgcagagggagctgcagctgaaggagaaggagaggaaggagcaagagctaagggcacttgcacagaaggcgcgcatggagaggactggtgccccacctgcacctacaggggttcctgctggtggtggtagaggtgctgttgatgacagggaggaagatatggatttggagcagcctcgtgagcaacgaagggagagtagagaagaaagggaagcaaggattgagcgtgacaggattcgtgaggagaggagacgtgagagggagagagagaggaggctggaggccagggatgctgcaatgggcaagaagagtaagctcactagagacagggatcgtgatgtcagtgagaagattgccctgggcatggcaagcactggcggtgctaaaggtggggaagtcatgtatgaccagaggttgttcaaccaggataaaggaatggactctgggtttgctacagatgatcagtataacatctactccaagggtctcttcacagcgcagccaacgctatccacactttacaggcctaagaaggacggtgattctgatgtgtatggcgatgcagatgaacaactggagaaggttatgaagacagataggttcaaaccagacaaaggattttctggtgcttcagagaggtctggaaagagagacagacctgtggagtttgataaacaggaggagaatgatcccttcggtcttgatcagttcttgactgaagtgaagaaggggaagaaagctgttgagaagattggaagcggaggagccatgagggcaagtggtggatcctcaatgagagatgattacgagggtggaggatctgggaggtcccgcattaactttgaaagaggtcgttgaggtattagatctgcatgttttgttcagaagtttctccatgcattccaaatgttatctggagggtattctgttgagaatatcaacttcttgatgagaggacttgatgtctgagttgtcttaatgcaacgtctacttccaaggggcatcttaaggagtgtacctgtttagatcctgtgattatgcttgttgtttatctatttgtggatggatctgtaagcttaacttatcatcattccatatcccttatattttgtggtgctttatgaagtctcgatgtgtctggctgaccttacattttctggtactgtaccaagtctttaagatgtatctgcctatctggctgaaatactgagacacgggatacatataaattccgtgttctgttttttcacaagttct</dnaseqindica> |
| External Link(s) |
