Difference between revisions of "Os04g0661700"

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(Created page with "{{JaponicaGene| GeneName = Os04g0661700| Description = Conserved hypothetical protein| Version = NM_001060685.1 GI:115461099 GeneID:4337289| Length = 7390 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0661700|
 
GeneName = Os04g0661700|

Revision as of 20:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0661700

Description

Conserved hypothetical protein

Version

NM_001060685.1 GI:115461099 GeneID:4337289

Length

7390 bp

Definition

Oryza sativa Japonica Group Os04g0661700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34163526..34170915

Sequence Coding Region

34163923..34163965,34164788..34164856,34165426..34165482,34165575..34166364,34166441..34166716
,34166787..34166853,34166947..34167021,34167354..34167548,34167663..34167812
,34167888..34168258,34168806..34168898,34168982..34169239,34169874..34169916
,34170504..34170863

Expression

GEO Profiles:Os04g0661700

Genome Context

<gbrowseImage1> name=NC_008397:34163526..34170915 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34163526..34170915 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcctacccccaccaccgccgcttcgccgtctccggcgacgcccccccgccgccgccgccgccgcagccgcagcctccacctccctcccacgcgagcccgcactggtaccccgggccgtccccaccgccgtaccctccccacgccaaccaccctttccctccccagcaccaccagtggggaccaccccaccctccgccgccgctgccgcagcagccgccgccgtatgggtaccatccctccctccctccgatgccgatgcagccgccgcttcttgcggcggggaatccctggcctcctcaccacgccgctgcccagccaccgccgcccagctacccgccgccgcctccgggccagggctgggccaatcattcgtgggctcaaagtcatggatacgcagggcatggaaatgaggaagattgggctacaaaggcgaaggcatgggctgctgctaaatctgttacagaaaaccatcatattcaacagcatgccatatccgcaaataggccagaagttcataattacggttaccaggatcagtatcagcaaccagctggtctgcccgcagaacctttacgcccgccaatccctcagtcaagtaatgaccagttgccatttcaaatgacaggacagcacagggaaacaaactatctgccagatggaggtccattggcgccaccagcaaagaactttggttcatttccatccgcctatgagcaggaggtatcttataattatccttctactccaggtgttgggaatgctatgattcaatatccaagctcgcagactcagttacctccaactgcctcagcaatgcgagacggatttccacaagcgccttccagtatgcatattgctccctcactggaacaacctcattttgggcatgatgggcagtcttccaagattgcagttgatcccagtgatcaacctttagaatttaatagtaggaaagctcctgatatggcagtgcacagaacagcaaatttcaattctaatattccagcagctccaatagcagcatctgatcatgatgcacattcagcaccagcgcaatcatggattccatctactacagtactttttcctcaagcttcagtaccaccacaagcagcacagatggacccttcagttcatgctgcaccactctttggagcagtttctggttcaagctatattccacctgcagcatttggagttggtaatgtgacagaagcattccctgtggatgcaaacactccttttaatgtcacagaaagatcaaagaaacctccagtgcctaactggcttcgcgaagaacttttgaagaagaaatctacatcagtgagtgcttcggtgcaacactcaacagagttccactccaagggatctgaagatgctgaaaaaacacttaaaagttctgatcaggctgacagcagaagcgtagattcagctaaatctactgatgatgatgaagaagatgaggacgaaattgaagcagcccggatggcagcaatgaaccaggaaattaagcgtgtattaactgaagttctcttaaaggttactgatgatctttttgatgagatcgcgacaaaagtattgaatgaagatgatccatcagctgaaccaaatgagcccactagagtttctagtgtgaaggggcctggtctgggagaatcaaaaccaaaggtctcagctaaagttgttgtccctgctaagccaactaatgttagctcagctgatcattctgatggtactgggttaagttcccctaaaggcgctcttcttggccttgctagttatgattcagatgatgaggacgatgagggtgataatgaggataaggttccagtttcaaacttatcgtctgaaactaaagctggcgcagctcgtccaggagaaggtgaaaaagccactgatggtgaacagcatggaaatcataatgaaagaaattctgtggtccaaaatgcttcattaggcgaagatcgtaaatttaatgatgaaatgtctcataggaactcaagtgcagaacttaaacaagagctacgtgttcatgacacacatagtagggaatttccttcagatgccaaaatatcaagtcagccgaaggatgtggctcctaccctggatgagaaggcacatggatattcccaaaatggaaaagttccaccttcaggcaataatgttgaaaattttagcaatatggagagcagtcaagggcatttagggaagagcagcaatgaggaagattttgtaaaggagccaaaggctgttcgaagaaaagaatccgaatcttcttccaaaagatataatgatgatgataaatctagcatgtatggaaatattgataaaaagggtagcttcaaggaggaaaaaggatctgacaggagtgtgagacatggagctgatacaagggaaccccgttccagaggaaactctaagcaggatgatgcaaaaggagagagaaaagattatcaaaaggacgtaagagagaaaagcagggattctgcagatagaagagagaaagggaaacatgaaaaggaggataggtcgaggcaaactacaaagggctcaagtagtcatagcagtagaaggtcaagatcaccaagtgcgagaagtcggaccaagaaggagagttcttcacatcgagagagtgtctcaagtgatgagccttctgataattcgaaaaggagaaaacttcattcatgtaaaagcagcatgtccccctcacccccaaaatctaggaacagacgagtttcgcggtctccacatagcaagcattctcaccgcaggcattcgccttattcatctgcggaaaggaagaagcgttccagatccagaactccagtcaaaagaagatag</cdnaseq>

Protein Sequence

<aaseq>MDAYPHHRRFAVSGDAPPPPPPPQPQPPPPSHASPHWYPGPSPP PYPPHANHPFPPQHHQWGPPHPPPPLPQQPPPYGYHPSLPPMPMQPPLLAAGNPWPPH HAAAQPPPPSYPPPPPGQGWANHSWAQSHGYAGHGNEEDWATKAKAWAAAKSVTENHH IQQHAISANRPEVHNYGYQDQYQQPAGLPAEPLRPPIPQSSNDQLPFQMTGQHRETNY LPDGGPLAPPAKNFGSFPSAYEQEVSYNYPSTPGVGNAMIQYPSSQTQLPPTASAMRD GFPQAPSSMHIAPSLEQPHFGHDGQSSKIAVDPSDQPLEFNSRKAPDMAVHRTANFNS NIPAAPIAASDHDAHSAPAQSWIPSTTVLFPQASVPPQAAQMDPSVHAAPLFGAVSGS SYIPPAAFGVGNVTEAFPVDANTPFNVTERSKKPPVPNWLREELLKKKSTSVSASVQH STEFHSKGSEDAEKTLKSSDQADSRSVDSAKSTDDDEEDEDEIEAARMAAMNQEIKRV LTEVLLKVTDDLFDEIATKVLNEDDPSAEPNEPTRVSSVKGPGLGESKPKVSAKVVVP AKPTNVSSADHSDGTGLSSPKGALLGLASYDSDDEDDEGDNEDKVPVSNLSSETKAGA ARPGEGEKATDGEQHGNHNERNSVVQNASLGEDRKFNDEMSHRNSSAELKQELRVHDT HSREFPSDAKISSQPKDVAPTLDEKAHGYSQNGKVPPSGNNVENFSNMESSQGHLGKS SNEEDFVKEPKAVRRKESESSSKRYNDDDKSSMYGNIDKKGSFKEEKGSDRSVRHGAD TREPRSRGNSKQDDAKGERKDYQKDVREKSRDSADRREKGKHEKEDRSRQTTKGSSSH SSRRSRSPSARSRTKKESSSHRESVSSDEPSDNSKRRKLHSCKSSMSPSPPKSRNRRV SRSPHSKHSHRRHSPYSSAERKKRSRSRTPVKRR</aaseq>

Gene Sequence

<dnaseqindica>6951..6993#6060..6128#5434..5490#4552..5341#4200..4475#4063..4129#3895..3969#3368..3562#3104..3253#2658..3028#2018..2110#1677..1934#1000..1042#53..412#gtccgtgtctctcttgactctcctccgcctcccctcccgtccctccgcctccatggacgcctacccccaccaccgccgcttcgccgtctccggcgacgcccccccgccgccgccgccgccgcagccgcagcctccacctccctcccacgcgagcccgcactggtaccccgggccgtccccaccgccgtaccctccccacgccaaccaccctttccctccccagcaccaccagtggggaccaccccaccctccgccgccgctgccgcagcagccgccgccgtatgggtaccatccctccctccctccgatgccgatgcagccgccgcttcttgcggcggggaatccctggcctcctcaccacgccgctgcccagccaccgccgcccagctacccgccgccgcctccgggccaggtatgtcgggggctatcctgtttcgttttggagtcgccgttggagactatagtaaattttctgttagggtttgtagttcaggatcgctgttggctgtagggtttctgggaagggtgtgatacggtgtttgattagggtgaggtgactataactctagggtggttttgtgactgtgtgaaactggtctgatgagtcactgagggatgattgtgtgaatagtgttgtccttgtacagttctcacttattcacaatggagactttcatatggatagatcatctagggtgaaggtctaaatcatcttttagaatgcattcaataaacctcctgcacttgttgtattttctttacttcattttggtacatattctttgtggcaaatccttagtgccttggaacaatttggttccctttagatatgatgccactccttcatgagctttggttaggtgctcttggtgaggttacattcagttggcttcaacatccaatctaaatgacataatgtttcccatgaccctgttttcttatctgttcttttgttgaattcaaataatgttttgttagttgacattgcttatttcctagggctgggccaatcattcgtgggctcaaagtcatggatacgcaggtttgtcattagatctaagctttatgttcatttggatctaattttattggtccagtatgcttgacaaccggatgttaatgaaacttgtgttgttactgatgcacagcactggttgatcattatgatgcagcatgcatctttcaatgtttaagctcataacactatgcatagggacaaatgtttattgaatgtacatgcgtttcaagaattttggggagtgtaagttgcctttaagtttttactaaagtagtcatcggctcatcgctagcggtgatcaaacaagtatccactatgccatctggagctattttctgcccattcccagtatgtattagtaaatttacatgagaactagcgtgtatgatgcacatgtttcccattatcccttttttctgaacttttgcttataaataattccttttctgattcaccaaatgcataggcttattagatgtatttatggtctgtgcttcaaaagaattcttacatatgtttgataataagatggtactaattgataataagatagtactaagctttcttggagcagacaaatcccttacagtaagaatgtagttactgatgatggttcaggattgaccttttcaatttgttttttctccccatctggaagggcatggaaatgaggaagattgggctacaaaggcgaaggcatgggctgctgctaaatctgttacagaaaaccatcatattcaacagcatgccatatccgcaaataggccagaagttcataattacggttaccaggatcagtatcagcaaccagctggtctgcccgcagaacctttacgcccgccaatccctcagtcaagtaatgaccagttgccatttcaaatgacaggacagcacagggaaacaaactatctgccaggtaccatatcttattactattgctcaatatatgttatatatggatatgtcagttccagagtggagctgaagataatattgcagatggaggtccattggcgccaccagcaaagaactttggttcatttccatccgcctatgagcaggaggtatcttataattatccttctactccaggtatgcttgcttggcaatataacttactgtgtagcctgaatcatattaaggctggtccctcctggtaataccttcagattcaaatatggaaagacttgcaagtctacagagctatttatttaagaaaaaagagcatatgacacacgttaccttctaaaaacatttgagctagcgttattgtttgtgtatgctccactcttcctatatttgaggcgattgcttggtgggtttcaccaccttcaaaaggaggaatacgcagatatctactcagaatcactttctcagtgactatgccattttatcatggattcaataattacctctgatatatcatgaatgtaattgaatgtttggttgagccctttttactttgaagcactgaaaatcttcatttctcttgctgccagtcctggaaattagatggaaatcacattttagaaaagctaattactggctggctgtgctcaatgtatataactcagtgtttggatggggtaacctgcattttttatccaggcttaatgctgactatgcaatgtaataacaggtgttgggaatgctatgattcaatatccaagctcgcagactcagttacctccaactgcctcagcaatgcgagacggatttccacaagcgccttccagtatgcatattgctccctcactggaacaacctcattttgggcatgatgggcagtcttccaagattgcagttgatcccagtgatcaacctttagaatttaatagtaggaaagctcctgatatggcagtgcacagaacagcaaatttcaattctaatattccagcagctccaatagcagcatctgatcatgatgcacattcagcaccagcgcaatcatggattccatctactacagtactttttcctcaagcttcagtaccaccacaagcagcacaggttcaattctattattttattactccatatgattcctctgcaccatagatatgataattaacttttaccttacagatggacccttcagttcatgctgcaccactctttggagcagtttctggttcaagctatattccacctgcagcatttggagttggtaatgtgacagaagcattccctgtggatgcaaacactccttttaatgtcacagaaagatcaaagaaagtaagttttgttcttctcttccttttttcttccacccttatttttgagattcctgcgtgtgtctgctcatgtgcctaagtactttgactgattcccgcgctctattatggccagcctccagtgcctaactggcttcgcgaagaacttttgaagaagaaatctacatcagtgagtgcttcggtgcaacactcaacagagttccactccaagggatctgaagatgctgaaaaaacacttaaaagttctgatcaggctgacagcagaagcgtagattcagctaaatctactgatgatgatgaagaagatgaggtgcagtttgctattctattactaaaaactacttatatgacttcattttggtcacaagataattcactaatttgttaaaaaaaaaagattcatggccttttggagcatatagaaatgttggggccatatgctagctactgagaagctatttgcacttacagcaactccattttaaaggaaagctacctttagttcttttttaggtggataattagacaacgtatttgaacaatgtgctggttttatccccttctattttcttttatctattttatagtctagtatagccgcctttatttgtaataattttactggactaaaattatttgcaggacgaaattgaagcagcccggatggcagcaatgaaccaggaaattaagcgtgtattaactgaagttctcttaaaggtcttgtttttaacatggaactggaagttactttgctaggtctgacaaggtcctgtcatttctttagtttttgatcctcttgtcactttccaggttactgatgatctttttgatgagatcgcgacaaaagtattgaatgaagatgatccatcagctgaacgtgagtgatgtgctaaattgtaaatttaaatagacattctgcatttctgataatttcttctacattgtagcaaatgagcccactagagtttctagtgtgaaggggcctggtctgggagaatcaaaaccaaaggtctcagctaaagttgttgtccctgctaagccaactaatgttagctcagctgatcattctgatggtactgggttaagttcccctaaaggcgctcttcttggccttgctagttatgattcagatgatgaggacgatgagggtgataatgaggataaggttccagtttcaaacttatcgtctgaaactaaagctggcgcagctcgtccaggagaaggtaagttcttaaaataaatacctgcagagcattacttgtccatttaaatatattaactcgagtaaataatcaataggtgaaaaagccactgatggtgaacagcatggaaatcataatgaaagaaattctgtggtccaaaatgcttcattaggcgaagatcgtaaatttaatgatgaaatgtctcataggaactcaagtgcagaacttaaacaagagctacgtgttcatgacacacatagtagggaatttccttcagatgccaaaatatcaagtcagccgaaggatgtggctcctaccctggatgagaaggcacatggatattcccaaaatggaaaagttccaccttcaggcaataatgttgaaaattttagcaatatggagagcagtcaagggcatttagggaagagcagcaatgaggaagattttgtaaaggagccaaaggctgttcgaagaaaagaatccgaatcttcttccaaaagatataatgatgatgataaatctagcatgtatggaaatattgataaaaagggtagcttcaaggaggaaaaaggatctgacaggagtgtgagacatggagctgatacaagggaaccccgttccagaggaaactctaagcaggatgatgcaaaaggagagagaaaagattatcaaaaggacgtaagagagaaaagcagggattctgcagatagaagagagaaagggaaacatgaaaaggaggataggtcgaggcaaactacaaagggctcaagtagtcatagcagtagaaggtcaagatcaccaagtgcgagaagtcggaccaagaaggagagttcttcacatcgagagagtgtctcaagtgatgagccttctgataattcgaaaaggaggtatatgccattcttaaattctcataatgtgtattgtattaattgttatccctgcgtggtaatttgtccattactttttttttctgttacagaaaacttcattcatgtaaaagcagcatgtccccctcacccccaaaatctaggaacaggtaactatatgtttacagcatatttataatgtagattaatgctgttaaaaatgtgcgaattagcagttagcttcaacatgtttgtagatggtattgttttatggctggcatcattagttaatcctaaaagttgtttttatgtttggcatcaataatgtggctgacatacttactctgttctggttatctggaagccacaaattgcttagcatttgatgttttttaaatcatgaatacggctagtcatgccatggtttttctatgatttccatcctttctccccatgcgaggataagagatttttgtttttgtgtgtgtgttggggtgggggggaggggatgtattggttgaactattttgtactatctgtctggattcatgttctttgaggcagtgcctcaaggacactgctttcgcatatctgctatggtaagtcttgtataggaatgcttttattctatgccttgtgaatttgatatgagtgtgcaggtatcttctgagtgaagaaacatcaggttcatatatctcttatcctttcacttacccatttagttatgtttcatctctagacgagtttcgcggtctccacatagcaagcattctcaccgcaggcattcgccttattcatctgcggaaaggtaagagattaatcagttcttcctttatcattatgttactccaggtggtatttccacatgaatttttcaggagttctcagcttcagtaatatggtcgatcttactgtagctgattataggaatttgattagatgcagaaaaatatattaacgagtttgagaaaatagaagtcaacctttaggtgtcttaagaacatgtacccgattaaaaaatgtgttctgggtttacatgaaacctttgtgttttaaattcaaatttacataagttgttattgcatggacttccatctcagcttgagaaattgaagacccttggtacaaaatttttcctagaactagaatatatttgtcatgcataacacttatgggctgcttggttttaggaataggacaggttggttcttcatggatcattcgatgattttggtggaacaactgtcactttattttgtactacgcttgtgctttgagtgataaaaatattggtgtatcaacccactacattgcccaaagtcaaaccaaactagacatcaaagttcgcagttaggatcggcagatgcccaattcagcatccattcgtccaaagcaaacaaccctagtaatattactaatgttaaaaaaccactgaaaacagagaggccaccaattcaggttttattgggacagagctgatatgctggcctgcctccaatcctagacactgaagcaaatgcgtgaactcctataaatctggaaccctgtctgccctatgccacttgtgtagtaactgtgttactttgtgttatattggtggtgtctttaaatctgtgtctaatcatttcaggaagaagcgttccagatccagaactccagtcaaaagaagatagaagatacttttgatttcaagatgcctcgacatccttgtgaggcgatgtgtggcatatcgctgcatcttctactgattcattgaacaacgcattcccacggtagcaagatgcccgcggatcaccagtgtagataagctggaggtttgcccatacagaggatattaaatcttctgtgctagcagcctagcagagagcaatgtacttaattattttgtaggcctagcgacccacgcaaatatgacatgtaccacctttcgatttcatgtattccatcttgattgtggaaaattggcaacgccaacgcccagtaggtgtgtactggcttgcgattatttttgtagttttgaagattactgttatgtttttttcttgaaacgcagattgttcgtattattct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0661700, RefSeq:Os04g0661700