Difference between revisions of "Os04g0666900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0666900| Description = Similar to Kinesin-like calmodulin-binding protein-like protein (Fragment)| Version = NM_001060717.1 GI:115461163 Gen...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0666900|
 
GeneName = Os04g0666900|

Revision as of 20:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0666900

Description

Similar to Kinesin-like calmodulin-binding protein-like protein (Fragment)

Version

NM_001060717.1 GI:115461163 GeneID:4337322

Length

8653 bp

Definition

Oryza sativa Japonica Group Os04g0666900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34438940..34447592

Sequence Coding Region

34438940..34439132,34439240..34439511,34440145..34440342,34440826..34440921,34441052..34441234
,34441331..34441533,34441621..34441747,34441832..34442026,34442134..34442274
,34442403..34442546,34442610..34442774,34443510..34443710,34443783..34443929
,34444009..34444161,34444465..34444567,34444688..34444803,34444902..34445083
,34445176..34445275,34445934..34446261,34446339..34446568,34446713..34446844
,34447521..34447592

Expression

GEO Profiles:Os04g0666900

Genome Context

<gbrowseImage1> name=NC_008397:34438940..34447592 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34438940..34447592 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>accccgacgactttgtctatgtccatacctccggaacttgctggagcaattccacttattgataggttccaggtagagggctttctgaaggcaatgcaaaaacagatccattcagctggaaaacgtggttttttttcgaagaaatctgtgggaccacatgttcgtgaaaagttcaccttggaagatatgttgtgcttccaaaaggatcctattccaacgtcattgctaaaaataagtagtgaccttgtaagccgttcaattaagttattccatgtcatactgaagtacatgggcatcgattccccagcaataataagtttggatgaaagaattgaacttgttgcaaagctttacaagcatactttgaaacgttctgaactgagagatgagctctttgcacagatttcaaaacaaacacgtaacaatcccgacagggcttggttaataagagcttgggagcttatgtatttatgtgcgtcatccatgccaccaagcaaagatattggagcatacttgtctgagtatgttcactacattgctcatggcgctacaactgattctgatgttcgagttctagcacttaacacactaaatgcactgaaacgctcagttaaggcaggccctagggttacaattcctgcacgggaggagatagaggctcttttatccagccgtaagcttacaacaattgtttttttcttggatgaaacttttgaagagatcacatatgacatggcaacaactgttgctgatgctgttgaggaacttgctggcattatcaaactttcagtatattctagtttcagcctttttgaatgccgaaaggttgttaatggatccaagtcttcagatgttggcaatgaggagtacattggtttagatgataacaaatatattggtgacctcctatctgaattcaaggcagccaaggatcggaacaaaggagaaattttacactgcaaacttgtatttaaaaaacgcctcttccgtgagtccgatgaggctataactgatccaatgtttgttcagctatcttatgtccagttacaacatgattatattttaggaaactatccagtaggtagggatgatgctgcacagctatctgctctgcaaatattggtcgaaattggctttgttgacaatcctgagtcttgtgttgaatggatatctcttttagagagatttctacccagacaagttgcaattacaagagcaaagcgagactgggagcttgacattgtctcacgctatcagttaatggaacatctgtcaaaagatgatgcaaggcaacagtttctcagaatcttaaggactcttccatatgggaactcagttttcttcagtgtccggaagattgatgatccaataggacttttacctggaagaatcattctgggaataaacaaacgaggggttcattttttccgtccggttcccaaggaatatcttcattctgcagaactgagagatatcatgcaatttgggagcagcaataccgctgttttctttaaaatgagagtcgctggtgttcttcatatctttcagtttgaaactaagcagggcgaggaaatatgtgtagcacttcagacgcatatcaatgatgtgatgctccgcagatattcaaaagcacgctctgctactagcgcggtttctcaaaacgatgtttctcaaacatataaaccaccgaatattgaaatatatgagaaacgtgtccaagaactgtcaaaagcagttgaggaatctgaaaggaaagcagatctgttgaatgaggagttacagaagaagacaaaacaagaaagagatatgcaaaaagaattagaaggtctgagggataccttgcaatctgaacggcaaagcattaaagaagtaacaaatgatcttgataaactaaaatccctttgtgatgaaaaggactcctctttgcaggcttcactgatggagaaaactagactggagaccagattaaaaagtggtcagggccaagaaagcagtaatagaacaggagtatcaggaaatcattttgagagagatactctcccaactgtaggcactgtcaataatagcattgagatgttagcaaagcttgaggaggagttaaaatcctgtaagaaggagcttgatgcatccaaggaattatcaaagaaattaacaatggaaaataatctgcttgaccagaaggttcaaaggcttgaaagagcaaaaagtgaagagaaaagtaatatggaaagagtttatgaggatgaatgttgcaagctgaaatctcgtattgctgaattggagcaaaaactggaaagcagaacacgttccctgaatgttactgaatcgactcttgccttaagaaatgctgaggtggatacattgcaaaacagtctcaaagaacttgacgagttacgagagttcaaagcggatgtggacagaaaaaaccaacagactgctgagattcttaaaaggcaaggagcacaattgattgagcttgaaaatctttataagcaagagcaggttctgagaaagcgttattataacacaattgaagatatgaagggaaaaataagagttttttgtcgtctgcgtcctctaaatgataaggagctcattgaaaaggacaagaatattgtttgcagccctgatgagtttacagttgcacatccatggaaagatgacaagtcaaaacaacatatatatgaccgtgtttttgatgctaacactacccaagaagaagtatttgaggacacgaagtatctagttcaatcggccgttgatggatataatgtttgtatatttgcttatgggcaaactggttctggaaaaacttttacaatttatggatctgaaaacaatcctggtcttaccccaagggctacctctgaactttttagggtgataaagcgtgatggtcacaaatattcattttctttgaaggcatatatggttgagctttatcaggataatcttgtggacctgttgttggccaaaaacgcaacacaccaaaaattggaaataaaaaaggattccaagggggttgttactgttgaaaatgtgacagttgtgaacatttcaagttttgaagaactgagggctataattttaagaggttccgagagaagacacaccgctggaacaaatatgaatgttgagagctcaaggtctcatttaattctttcaatcattattgaaagtaccaacctccagactcaatcttatgcaagaggaaagctaagtttcgtggaccttgctggttctgagagggtgaaaaagtccggctcagcaggaaaacaactgaaagaagctcaaagcatcaataagtctctttctgcattggctgatgtgattggggctttatcttctgatggacaacatataccttatcggaaccataagttgacaatgctgatgagtgattctcttggaggcaatgcgaaaaccttgatgtttgtgaatgtctcaccagcagagtccaacctggaggagacttacaattcactcatgtatgcttcacgagtgcgttgcattgtcaatgatacgagcaagcatgttgccccaaaggaaatcatgaggttgaagaagttaattgcttattggaaggagcaagctggcaagcgtagtgaagacgacgacctggaggaaatacaggaagagaggacaccaaaggagaaagcagataatcgcttgactagctga</cdnaseq>

Protein Sequence

<aaseq>TPTTLSMSIPPELAGAIPLIDRFQVEGFLKAMQKQIHSAGKRGF FSKKSVGPHVREKFTLEDMLCFQKDPIPTSLLKISSDLVSRSIKLFHVILKYMGIDSP AIISLDERIELVAKLYKHTLKRSELRDELFAQISKQTRNNPDRAWLIRAWELMYLCAS SMPPSKDIGAYLSEYVHYIAHGATTDSDVRVLALNTLNALKRSVKAGPRVTIPAREEI EALLSSRKLTTIVFFLDETFEEITYDMATTVADAVEELAGIIKLSVYSSFSLFECRKV VNGSKSSDVGNEEYIGLDDNKYIGDLLSEFKAAKDRNKGEILHCKLVFKKRLFRESDE AITDPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILVEIGFVDNPESCVEWISL LERFLPRQVAITRAKRDWELDIVSRYQLMEHLSKDDARQQFLRILRTLPYGNSVFFSV RKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRV AGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSATSAVSQNDVSQTYKPPNIE IYEKRVQELSKAVEESERKADLLNEELQKKTKQERDMQKELEGLRDTLQSERQSIKEV TNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQESSNRTGVSGNHFERDTLPT VGTVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKS NMERVYEDECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQNSLKELDEL REFKADVDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCR LRPLNDKELIEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKY LVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSFS LKAYMVELYQDNLVDLLLAKNATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIIL RGSERRHTAGTNMNVESSRSHLILSIIIESTNLQTQSYARGKLSFVDLAGSERVKKSG SAGKQLKEAQSINKSLSALADVIGALSSDGQHIPYRNHKLTMLMSDSLGGNAKTLMFV NVSPAESNLEETYNSLMYASRVRCIVNDTSKHVAPKEIMRLKKLIAYWKEQAGKRSED DDLEEIQEERTPKEKADNRLTS</aaseq>

Gene Sequence

<dnaseqindica>8461..8653#8082..8353#7251..7448#6672..6767#6359..6541#6060..6262#5846..5972#5567..5761#5319..5459#5047..5190#4819..4983#3883..4083#3664..3810#3432..3584#3026..3128#2790..2905#2510..2691#2318..2417#1332..1659#1025..1254#749..880#1..72#accccgacgactttgtctatgtccatacctccggaacttgctggagcaattccacttattgataggttccaggtatatgctagcattcccaatggtgtgatacatcccatggcgatagcaatatctcatccatgttcaattgtttacattacgattgatgaccatgttgtgcctttagtggtttacaagagcgtacactttagagctgaggcattgttttgctgaacaattgcaacagttgattgtttgagacggaagatgcccatcataattatcaccatgcaataaatttgacgagatcctgtaacaactaagaattgatgttttctctataaatggatggtgacatattgagagaaaggataagtattcatatagctatgcattttgcactattctaacttgaataaataggcttgtctacctcgttgtcattagtccttttgtccttaacattagtatttgcaagtaggaaacttaccaggctgaagaattgggaaaggctcctcacaatcttctcattggttgtaaactggatcatacttgaatcttggatttaacttagttcgttagagttctgtgtttatttgtaaattttgtccctgcgttcagtacctgtagactgcagtgattcaataggagcatggaaatatttcaatagaatcgattattagtgtcagtacgcatgcataatgaattaatatgactgccatgttaatcgtagtactgaaatatgagtatatgacaggtagagggctttctgaaggcaatgcaaaaacagatccattcagctggaaaacgtggttttttttcgaagaaatctgtgggaccacatgttcgtgaaaagttcaccttggaagatatgttgtgcttccaaaaggtgatgccatcaatccccacattatctgttaggttgcattttgagcaatttgtttatgttttcaaatcctttgcaaaagtataagattatgataaaaatggcgatgcttctattattcagagtttctttggtctatttttgcaggatcctattccaacgtcattgctaaaaataagtagtgaccttgtaagccgttcaattaagttattccatgtcatactgaagtacatgggcatcgattccccagcaataataagtttggatgaaagaattgaacttgttgcaaagctttacaagcatactttgaaacgttctgaactgagagatgagctctttgcacagatttcaaaacaaacacgtaacaatcccgacaggtatgaagcagatttctcatggatagcaattcgatgggatacaaccatcttatgaatgttattatttgtacttacagggcttggttaataagagcttgggagcttatgtatttatgtgcgtcatccatgccaccaagcaaagatattggagcatacttgtctgagtatgttcactacattgctcatggcgctacaactgattctgatgttcgagttctagcacttaacacactaaatgcactgaaacgctcagttaaggcaggccctagggttacaattcctgcacgggaggagatagaggctcttttatccagccgtaagcttacaacaattgtttttttcttggatgaaacttttgaagagatcacatatgacatggcaacaactgttgctgatgctgttgaggtatttacatttctcctctgcaagtagatttgaaattgatatatgctaatgctgttgagttcttcagaataattcagtcagacacatataatattttgttggtacgggtgcaactttcatgtgattaagctattattggtcgggtagtttaataataaccatatgagcatggcatgatttttagccaactgatgggcttgttaaataggtactccctccatcccataatataagggattttggagggatgtgacacatcgtaggacaacgaatctagacaagctcctgactagattcgttgtcctaggatgtgtcatatccctctaaaatcccttatattatgggacggagggagtaaaaactatgaatatatctcttttatgtgcatggggactgaggacagttaattgatttcatgttttatgccaaaatatattttcaatgtttccatacaaaaatagttctacttcaaattattaggtacttaggtcttgcttctggttgccacagagcagagattcccaacatcacaactcggttcgaatatcagaaacactattgtattattcatcagaactttttgtatagtttttactgtttctgtacggtgtatttgaagttgtaagatctaaggaaacataacattttataatgacaggaacttgctggcattatcaaactttcagtatattctagtttcagcctttttgaatgccgaaaggttgttaatggatccaagtcttcagatgttggcaatggtatttctttcagtacaaagtcacaaggctaccttttcctccctttctgttgtttttaacagcacttttgtttccttacttttcatacacagaggagtacattggtttagatgataacaaatatattggtgacctcctatctgaattcaaggcagccaaggatcggaacaaaggagaaattttacactgcaaacttgtatttaaaaaacgcctcttccgtgagtccgatgaggctataactgatccaatgtttgttcagctatcttatgtccaggtactggcctgggcagctgattgaagtgctgccaattcttacgttacagaagtaatattgtttccttggaagtgctgactaatataattgctatgcagttacaacatgattatattttaggaaactatccagtaggtagggatgatgctgcacagctatctgctctgcaaatattggtcgaaattggctttgttgacaatcctgagtcttgtgtgtaagtattttgtaaggccctgcctgatctcccattgcactcttgaatgtagtctcagcgattgtaacaataagatacatccttttgttttattgacatgaaattttcttgtcttcctagtgaatggatatctcttttagagagatttctacccagacaagttgcaattacaagagcaaagcgagactgggagcttgacattgtctcacgctatcagttaatggtatttacctatctgtacaactttatgataccacacaaactcgatctaattattttatgtctattcaatttgtaacatacttttcctattcaactccatggcttgcgtccatcatatcaatgattgactaacctctagttgtaagaaaggggaggttttgcaaatctaaattaatttattattctctcaaatgaattatttcaatgtaagttgtgatgaaatagtaaatttctcaattcgaacttacatgcaaaatatgcttgatacttctcaattacctaagtgctttattgttgcattcaggaacatctgtcaaaagatgatgcaaggcaacagtttctcagaatcttaaggactcttccatatgggaactcagttttcttcagtgtccggaagattgatgatccaataggacttttacctggaagaatcattctgggaataaacaaacgaggggtctgatgcctaaccacatgttgaaatgctatacgttttctgccagttttagctaatttctttttctgcgttaatgcaggttcattttttccgtccggttcccaaggaatatcttcattctgcagaactgagagatatcatgcaatttgggagcagcaataccgctgttttctttaaaatgagagtcgctggtgttcttcatatctttcagtttgaaactaagcaggttagttttaaatctctaccaggaaataattcatactatgtgtaggctgtgaaataaccatctgatatttagggcgaggaaatatgtgtagcacttcagacgcatatcaatgatgtgatgctccgcagatattcaaaagcacgctctgctactagcgcggtttctcaaaacgatgtttctcaaacatataaaccaccgaatattgaaatatatgagaaacgtgtccaagaactgtcaaaagcagttgaggaatctgaaaggaaagcagatctggtaagtggttttagccgtaaaataatattgataatgaacactgcttatagtttataatcttgggagaactgtcttgttattgcctctatctgaaatgtatgatctagtgtaattttctgtgctagtttagattcaatatctagatcatttgatcgttattggattattgtctgcaaacggttatttgattaatgcttcctggcctatgccaatttataaccctctgtgatagataaaaagaaggtgaatggtatattacttagttttttttttttgcagcatcacatataaaaagaacatattaggtgaaaagctgaattcatgcatatcaaaggatttcaatagatgttataatttcactcatttttatggtagacaatgaactagactagtaggtcaaactcgaaaggtctaaaaggcagttctgtctcatgttattggtggatttttgtacagagaatatggcttaaaatcatgatttttttagcgccatatttcttttaagcatctattcatggagtgcttgagtacatctgccatttttagttaaaacggtctctataccttgcctcataaatactaaaagtctcagtaacagtaaggtatatctttaagatcctacttcggtcttgcaagttgcaacatattgaagataatggcattgtatatttagcatggaagaaaccattacttacatagctcatttgtcactggttgtcttttttttttttatagttgaatgaggagttacagaagaagacaaaacaagaaagagatatgcaaaaagaattagaaggtctgagggataccttgcaatctgaacggcaaagcattaaagaagtaacaaatgatcttgataaactaaaatccctttgtgatgaaaaggactcctctttgcaggtatggcgataaactgtcagcttggttaaatattttgtataatctaacttgcaattttatcaggcttcactgatggagaaaactagactggagaccagattaaaaagtggtcagggccaagaaagcagtaatagaacaggagtatcaggaaatcattttgagagagatactctcccaactgtaggcactgtcaataatagcattgaggtaccttagaacaattagatatctctaaggctgtgttttgtcttaaatgatttgctcgtatcttttgtagccaaccctaggtttgcaaattgttattatacatttgaccttttgggggttctgaacagatgttagcaaagcttgaggaggagttaaaatcctgtaagaaggagcttgatgcatccaaggaattatcaaagaaattaacaatggaaaataatctgcttgaccagaaggttcaaaggcttgaaagagcaaaaagtgaagaggttttcttttgcttatcctggatcccctaattatagttcactgtgagcattgcatagttttttttgtttcatatttttgagtatatatggtttcttcaactatacagaaaagtaatatggaaagagtttatgaggatgaatgttgcaagctgaaatctcgtattgctgaattggagcaaaaactggaaagcagaacacgttccctgaatgttactgaatcgactcttgccttaagaaatgctgaggtggatacattgcaaaacagtctcaaagaacttgacgagttacgagagttcaaagcggtacgtacaagatatatgacaagtacattcaatattcttataggaccttcagaaatttgtaaaattctatttttcgtatttcaggatgtggacagaaaaaaccaacagactgctgagattcttaaaaggcaaggagcacaattgattgagcttgaaaatctttataagcaagagcaggttctgagaaagcgttattataacacaattgaaggtatgctagaaatagaagttacttttctttagttcttatagtattttatgatatcttggtttctaattgaatcataattgctcacagatatgaagggaaaaataagagttttttgtcgtctgcgtcctctaaatgataaggagctcattgaaaaggacaagaatattgtttgcagccctgatgagtttacagttgcacatccatggaaagatgacaagtcaaaacaacatatatatgaccgtgtttttgatgctaacactacccaagaagaagtatttgaggacacgaaggtgaccttttttttaacacttctttttaacatacatgtgctcattagattatttgcaattggactccatgtgtttatcatgaattttgtgatgcagtatctagttcaatcggccgttgatggatataatgtttgtatatttgcttatgggcaaactggttctggaaaaacttttacaatttatggatctgaaaacaatcctggtcttaccccaagggctacctctgaactttttagggtgataaagcgtgatggtcacaaatattcattttctttgaaggtaacaattttttcgtgtgcatccttaaatacatttatatgcattggatgatacctatttatttggcctatgtaaacaacagttgtactattaacaaagtgatttattttgactttcatatgatacgcaggcatatatggttgagctttatcaggataatcttgtggacctgttgttggccaaaaacgcaacacaccaaaaattggaaataaaaaaggattccaaggtataggaccaagacatgttaaccttctttgttcttgcttcacacgttgtctgcttttgttgaagtctgttgattagaagaacaagttatgttcccatttgactatattttgtgcctcaaaagtaacatcctgtactgtcataaaattaatgtttgctcatttcaagcaagataatataattttcgctaatttggtttacatttgttgttgcaagtttaggcaatcaattttagcaccttttaggtaaaagacgatgcatcggtaacattcatctgtgttcctgtacctccataattgaactacataacacaaatagctacagtttgagggtaatagtggccagggagtagagacaaacctctgaccaatgcaaatttccttcaggacttccctctattaaaatgtgtatatctttaattgctcatgaattgttgctattttacagttttatagagctaattaatttataattttccttttagggggttgttactgttgaaaatgtgacagttgtgaacatttcaagttttgaagaactgagggctataattttaagaggttccgagagaagacacaccgctggaacaaatatgaatgttgagagctcaaggtctcatttaattctttcaatcattattgaaagtaccaacctccagactcaatcttatgcaagaggaaaggtatggtgggttgtaactggaaacctcatgctagccttgctgtgtcgcataaccaatttgtttcacaattttttttataaaaaaactatatttgagtattcttattgtctccatttaaccgtctctatcacttacctgtatattgtttaaatttgccgcttttacaaaatacctatttacatatacctttgcatggtacgttcctcagatatcaaactaaacatctaccatatatgtccatatttcagtggacgtattatgaagattgattaccataccttacctcaagttgataagttttgccttcttatgtatgacacttgtttgcccataataactctttgcatctagttattttcgtaatttgacagccttttgttttgagttttgactgggagtatctatcgcagaatgcttgtcggaatatatatttcataaaaccgacgcattgctgtagcacttgcatatttgatttaggcatctacatcaaactatgttctaagttttatttttcttgtgttgtttatttgctataattaattaagaataaataaactctgcacagaacacactatatgttaagctaggctgtgagatgctattctaagctgtcaaaattttccgtgtgaacagctaagtttcgtggaccttgctggttctgagagggtgaaaaagtccggctcagcaggaaaacaactgaaagaagctcaaagcatcaataagtctctttctgcattggctgatgtgattggggctttatcttctgatggacaacatataccttatcggaaccataagttgacaatgctgatgagtgattctcttggaggcaatgcgaaaaccttgatgtttgtgaatgtctcaccagcagagtccaacctggaggagacttacaattcactcatgtatgaatttctattgctccagtatacaagtctttttgtgttatgcccctggtgctcgtgtacacctgttgagtattgactggcattttttttcctccatcttgcaggtatgcttcacgagtgcgttgcattgtcaatgatacgagcaagcatgttgccccaaaggaaatcatgaggttgaagaagttaattgcttattggaaggagcaagctggcaagcgtagtgaagacgacgacctggaggaaatacaggaagagaggacaccaaaggagaaagcagataatcgcttgactagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0666900, RefSeq:Os04g0666900