Difference between revisions of "Os04g0677400"

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(Created page with "{{JaponicaGene| GeneName = Os04g0677400| Description = Protein of unknown function DUF639 family protein| Version = NM_001060799.1 GI:115461327 GeneID:4337405| Length = 36...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0677400|
 
GeneName = Os04g0677400|

Revision as of 20:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0677400

Description

Protein of unknown function DUF639 family protein

Version

NM_001060799.1 GI:115461327 GeneID:4337405

Length

3684 bp

Definition

Oryza sativa Japonica Group Os04g0677400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35001113..35004796

Sequence Coding Region

35001345..35001590,35001714..35001957,35002081..35002193,35002445..35003048,35003133..35003313
,35003406..35003548,35003704..35003873,35003953..35004039,35004146..35004371
,35004557..35004696

Expression

GEO Profiles:Os04g0677400

Genome Context

<gbrowseImage1> name=NC_008397:35001113..35004796 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35001113..35004796 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtctccttgaggacctcctcctcgccccgcgcgtcgacggcggtggcggcggcgacggcgaggccatggcggcgcccgactacgccatccctcccctctccccaaccgccgcctccgtcgtccaccgatgcgcccggatcgccggcgtggaggtggagcagctgctgcggcggttcgagccggagaagggggaccagccgctggcgtacgccaggagcgtcgtggagtactgctcctacattgccctgcgcgtcgagaccaagcgccatgactacctcagcgacagcgagttccactcgctcacctacgacatgatgatcgcctgggaagcccccgacgacgagacggacgccgcgttgcagaaaatgtcatttagcttcgttgacggcaaggatgacgacgattgtgggtccatgttctgtttgagccccacacaaatggccattcaggttgatgggaggagaacggtcagtcctgaagcatttgccaagattattcctgcgtgtcctgcaatggcacacgcgatcactgttcgcaacttatttgatgcgctcacaaactctacgggaggccgcctgcattttctcatctaccataagtacctcaaatgtttagacaaggtgctgagatttgcgaaacgtatatcaggtggacacaaagctccagctcttcaactttctgatggagaagtgatccttgatatctatggtgccgcgacaaccaagccgattcttcaacacattgggacgtccacttggcctgggaggctcacactgacaacccatgctttgtactttgagccagtcagtgttgatttctcatacaacgaggctgtggtgtatgatctgtcaagggacttgaagcagtctataaaacgtgaatcaactggcccatggggtgctcagctatttgacaaagctgtcatgtacaaatctagctctacaagagagccggtgttcttcgaatttcctcaattcaaaggtcacactcgtcgagactactggtttgcaatcatcaaagaggtgttgcacgctcacaagttcattaggaagtacaggatgatcaatttacataaggccgaggcgctttctgttgcgacactaggaattctcagataccgcacggtgaaggagggattccacatactgcctgcacatttcaagactacccttgccttcaatttggcagagaaattgcccaagggggacaagatactggaagcattgtatggtcagatgaaagattattcctcaaggttcagagtagatgaagattctgttcaaagcagttcagatgatctgacgcttgctgatcctttcccactttctgcatatactttggtgaacatgggtttgttgacactcaaagaggaggacaatcccgaggaatgggatctcactgtccgagatgtgcagacgggaggaactagctcagtgcaaatggctctagagagatctgtaggttactctggcagagtggaggctgcgagggcgacccttgatcaggtcaaagtggaagacatcgacactaatgtggctgtcctgaaggaactgctatttccgttaattgaaataggcaaaaggcttctctttttggctgagtgggaagatccacttaaatcatacgtcttcttgttctgtttcctcttcatagtttacagaggctggatttggtacattttccctgtctttctgcttggttctaccatcttcatgctatggcaaaggcataccgggaacgggcagatgataggcgcatttgaagtcacaactccacctaggagacgaactgtagaacagctactggcgctgcaacaagctatctcgcaattagaggcacaagtgcaagccggaaacatttttcttctcaagctccgatccctcctgcttgcagcgttccctcaaagcacgaacaaagtagcagctacaatgctcgtggcatctgcgatattcgcgtacctgcccttgagaagcatacttgtactgattgtgctggaagcatacacgaggcatatgccggcgaggaagaagagcagcgagaagttggtgaggagactgagagagtggtggctgcgaatcccagctgctcctgtacagctcttgaggcctcaggataccaggagatggacatcgaggttgagatcgagatga</cdnaseq>

Protein Sequence

<aaseq>MGLLEDLLLAPRVDGGGGGDGEAMAAPDYAIPPLSPTAASVVHR CARIAGVEVEQLLRRFEPEKGDQPLAYARSVVEYCSYIALRVETKRHDYLSDSEFHSL TYDMMIAWEAPDDETDAALQKMSFSFVDGKDDDDCGSMFCLSPTQMAIQVDGRRTVSP EAFAKIIPACPAMAHAITVRNLFDALTNSTGGRLHFLIYHKYLKCLDKVLRFAKRISG GHKAPALQLSDGEVILDIYGAATTKPILQHIGTSTWPGRLTLTTHALYFEPVSVDFSY NEAVVYDLSRDLKQSIKRESTGPWGAQLFDKAVMYKSSSTREPVFFEFPQFKGHTRRD YWFAIIKEVLHAHKFIRKYRMINLHKAEALSVATLGILRYRTVKEGFHILPAHFKTTL AFNLAEKLPKGDKILEALYGQMKDYSSRFRVDEDSVQSSSDDLTLADPFPLSAYTLVN MGLLTLKEEDNPEEWDLTVRDVQTGGTSSVQMALERSVGYSGRVEAARATLDQVKVED IDTNVAVLKELLFPLIEIGKRLLFLAEWEDPLKSYVFLFCFLFIVYRGWIWYIFPVFL LGSTIFMLWQRHTGNGQMIGAFEVTTPPRRRTVEQLLALQQAISQLEAQVQAGNIFLL KLRSLLLAAFPQSTNKVAATMLVASAIFAYLPLRSILVLIVLEAYTRHMPARKKSSEK LVRRLREWWLRIPAAPVQLLRPQDTRRWTSRLRSR</aaseq>

Gene Sequence

<dnaseqindica>3207..3452#2840..3083#2604..2716#1749..2352#1484..1664#1249..1391#924..1093#758..844#426..651#101..240#gcttgccttaaacgggcggcgtgacggggacacactgccgacgatcgaacgaacgaacgaacgatgcgtccctcctggtgctccgtcgtcgccaccccagatgggtctccttgaggacctcctcctcgccccgcgcgtcgacggcggtggcggcggcgacggcgaggccatggcggcgcccgactacgccatccctcccctctccccaaccgccgcctccgtcgtccaccgatgcgcccggtatgatctccctcatctcctcctcgtcgtatggattaatgtccaatttgatttaattgatcgattcctgatcgatcgcggcgagaaacgtcaacctgggttcgaaacctcacctcttctgattatttgatattaggtcgttatttcttaatattcgtgtatttttttatcgatcgtggctgcaggatcgccggcgtggaggtggagcagctgctgcggcggttcgagccggagaagggggaccagccgctggcgtacgccaggagcgtcgtggagtactgctcctacattgccctgcgcgtcgagaccaagcgccatgactacctcagcgacagcgagttccactcgctcacctacgacatgatgatcgcctgggaagcccccgacgacgagacggacgccgcgttgcaggtgatgacaccccggttttctttttttttttcacccccaattcaacatcaccatcttgtttgttgttcatacgcaactctgatcagaaaccgatacgctataacagaaaatgtcatttagcttcgttgacggcaaggatgacgacgattgtgggtccatgttctgtttgagccccacacaaatggccattcaggttatatatatatctctgtcaatttgacatattttgtggtttctcaagtatcaatccaaacatttgatgaaatatttaggttgatgggaggagaacggtcagtcctgaagcatttgccaagattattcctgcgtgtcctgcaatggcacacgcgatcactgttcgcaacttatttgatgcgctcacaaactctacgggaggccgcctgcattttctcatctaccataagtacctcaaatgtttagacaagtatgcattggcaccagcttctcttgtttctcttcattgttacagttattgtcattctctgaaacctgaacaatgagcattactgaatattcaggcactcggttactttcactgcatgattgccttactatggcgcctctggtttctgatgttagggtgctgagatttgcgaaacgtatatcaggtggacacaaagctccagctcttcaactttctgatggagaagtgatccttgatatctatggtgccgcgacaaccaagccgattcttcaacacattgggacgtccacttggcctggttaagaatcctccctatggtaattttgatcagtgttggtgaattgtttccttcactatggccttaaggtgtataaggtgcatattttgcagggaggctcacactgacaacccatgctttgtactttgagccagtcagtgttgatttctcatacaacgaggctgtggtgtatgatctgtcaagggacttgaagcagtctataaaacgtgaatcaactggcccatggggtgctcagctatttgacaaagctgtcatgtacaaatctagctctacgtgagtaattactactgtagaataaaattttttttaagtttctgctcatcttgtagctttgctcatacaattttactttgacagaagagagccggtgttcttcgaatttcctcaattcaaaggtcacactcgtcgagactactggtttgcaatcatcaaagaggtgttgcacgctcacaagttcattaggaagtacaggatgatcaatttacataaggccgaggcgctttctgttgcgacactaggaattctcagataccgcacggtgaaggagggattccacatactgcctgcacatttcaagactacccttgccttcaatttggcagagaaattgcccaagggggacaagatactggaagcattgtatggtcagatgaaagattattcctcaaggttcagagtagatgaagattctgttcaaagcagttcagatgatctgacgcttgctgatcctttcccactttctgcatatactttggtgaacatgggtttgttgacactcaaagaggaggacaatcccgaggaatgggatctcactgtccgagatgtgcagacgggaggaactagctcagtgcaaatggctctagagagatctgtaggttactctggcagagtggaggctgcgagggcgacccttgatcaggtcaaagtggaagacatcgacactaatgtggctgtcctgaaggtactaaatgtcattttctcataatcttctaaactaagatatgaattcagataggaaaagtcttgagttctggaacaaccactgagctctgagtgacctgtacaggcatacctaagcctgaatttccattcatagttttagattgctcaataattgtagactgatagttgcttccaatgtcatcaagattgatcacaattcaagccattattaagtgtattaatgtttgttgatttactgttaatatgcaggaactgctatttccgttaattgaaataggcaaaaggcttctctttttggctgagtgggaagatccacttaaatcatacgtcttcttgttctgtttcctcttcatagtttacaggtaatatctgaaatcacctctcttttttttttggctaaaacgaactgaaatacttctaccagtagttaaaaaattttgtttcacggagcaatgttaatacctattccatactaaaccctgcagaggctggatttggtacattttccctgtctttctgcttggttctaccatcttcatgctatggcaaaggcataccgggaacgggcagatgataggcgcatttgaagtcacaactccacctaggagacgaactgtagaacagctactggcgctgcaacaagctatctcgcaattagaggcacaagtgcaagccggaaacatttttcttctcaagctccgatccctcctgcttgcagcgttccctcaagtacgttacttcttctcacattatcactcacaactacgaattactttgtaaaccatcacatcaaaactctaaatcttgcaacattctgcaattactatataacaattgttattgtctggtcagagcacgaacaaagtagcagctacaatgctcgtggcatctgcgatattcgcgtacctgcccttgagaagcatacttgtactgattgtgctggaagcatacacgaggcatatgccggcgaggaagaagagcagcgagaagttggtgaggagactgagagagtggtggctgcgaatcccagctgctcctgtacagctcttgaggcctcaggataccaggagatggacatcgaggttgagatcgagatgacccacatcggaaatgtcggtactttacacatgtattatatgtacctgtaaattcatcatgttgttagaaatgttgatatatacgatcagatttttgtgttgaaatggaaagtacatattgtgcaaaatggaattgtgggtggatcgtattttgtattgtgaatttttgttgaaagctgcactgaaggaatttggctgtctatcctatgcagtagctactatgcatttatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0677400, RefSeq:Os04g0677400