Difference between revisions of "Os04g0682900"
(Created page with "{{JaponicaGene|
GeneName = Os04g0682900|
Description = Similar to DNA mismatch repair protein MSH3 (AtMsh3)|
Version = NM_001060835.1 GI:115461399 GeneID:4337442|
Length =...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0682900| | GeneName = Os04g0682900| | ||
Revision as of 20:02, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0682900 |
|---|---|
| Description |
Similar to DNA mismatch repair protein MSH3 (AtMsh3) |
| Version |
NM_001060835.1 GI:115461399 GeneID:4337442 |
| Length |
7109 bp |
| Definition |
Oryza sativa Japonica Group Os04g0682900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:35269930..35277038 |
| Sequence Coding Region |
35271908..35272018,35272569..35272640,35272735..35272995,35273156..35273287,35273474..35273725 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:35269930..35277038 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:35269930..35277038 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcaagccgaagcagcaagtgctctcccgcttcttctcccccaagccgcggccctccgcccccgccaccgccgacgatccgccgcctccgcctagacctcccgccgagccgcccgtcgccgccgtcgtctccttctcgcccgccaagcgcgcgcgcgccctctccgtctcccccaaaaccaccgccaaaagggccaagccctcccctcccccttccgactacgttcgccgcaggctgctcgaaccgccccggccgcccccgcccgccgctgtgaaccctagcggcaaagcttacaccccgctggagcagcaggtggtcgacctcaaggcgcgccaccccgacgtcctcctcatggtcgaggtcggttaccgcttccgcttcttcggcgaggacgccgccgtcgccgcctccgtgctcggcatcatcgcccaccccgaccacagcttcctcaccgccagcatccctaccttccgcttgggcttccacgtccgccgcctcgtcgccgcggggcacaaggttggcgtcgtccgccagaccgagacggcggcgatcaaggcggcgcacggcgggggcgcggccggcacgcccttcgcgcgcgggctctcggcggtgtacacgcgcgccactatcgaggccgcggccggggagctggagggcggcggcgcgcccgacgaggggagcaggtacctcgtgtgcgtggtggacaaggaggtggacgccatggggacggaggggttcgaggtgaagatcggggtggtggccatcgaggtttcgaccggtgaggttgtgcacggcgagttcatggacggagtctcgaggaatggccttgaggccgtgctgcttggcttggcgcccgttgaggtcatcctcgggactccaatatcctctgccacggaaaagctgatggtggcatatgccgggcctacctctaatgtccgggttgagcgcacctcgcgtctttgttttagtgagggtggtgctttagctgaactgctctctttgtttgagaagtctggggttgatgctccaactgttgagaatggcagacatttgatggagatgaacgaggagaacaataatcctcgtgggattgagggtatcatggctatgccagaactagttatccatgcactggccttgagtgttcgctatctcaagggttttggtatggacaggataatctgctttggttcttcatttcagccatttacagctaacactgaaatgtctctgtcagcaaatactcttcaacaacttgaggtattgaagaaccactcagatggttcattggatggatcattgttccaaactatgaacaacacatgtacagcttttggatccagattgtttagacactggctgactcaccctttatgtgatagaaatcaaatatgtactcgtcatgacgcggtctctgagatctctgaatcaattggatcacaacaatattcaactaacaatctccaggatgaagtggacatgtcttgctcatcttctgtgagaagtgatctgagcaccattctttcatccgttttgagaatgctggcaggaactcttgatatacaaagaggaataacaaggattttccactgcaaagccacagcgaaagagtttgttggggtcgtccaagctatcctgacggctggaaagcaactgcagaagcttgttcttgaggatacagacaccatgtcttctcagcatagaactgtgcactctcctttgttgagaaggctaataaatacggcttcatcatgtactgtcctggctaatgctgcgacacttgtgtcttgtcttaacaaagatgctgctgatcaaggagatatgctaaacttattcattgcatctgttgatcagttcccagaggttgcagagggtcatgcaactgttgaaatggccaagcagaaattggagctgttaattactgagtatcgaaagcagcttggtgtgcgcaacttggagtttaaaacagtagctgggacaactcatttgattgaactaccggtggatagaaaggtaccttcaagttggatgaaagtaaacagcaccaagaaaacaattagataccacactccggaagtctcgaaaaacttggagaatttattgctggctaaggaaaagctagcagttatctgcaggacaacatggaataacttcctcatggatttcggcagatactatgcgcagtttcaagcaactgttaaatctcttgccactctggactgcttatactcgcttgccactctcgcaaaacaaaataaatatgtacgaccaaattttgttcgtgagaatgaagcaagtcagattcacataaaagatggccgccatccggtggtcaatatgaaaataatattctactgtgccacggacactatttccaatactactggcagatcacacacggtcatgcatacttcatgtgaagcatttagtttatgttga</cdnaseq> |
| Protein Sequence |
<aaseq>MGKPKQQVLSRFFSPKPRPSAPATADDPPPPPRPPAEPPVAAVV SFSPAKRARALSVSPKTTAKRAKPSPPPSDYVRRRLLEPPRPPPPAAVNPSGKAYTPL EQQVVDLKARHPDVLLMVEVGYRFRFFGEDAAVAASVLGIIAHPDHSFLTASIPTFRL GFHVRRLVAAGHKVGVVRQTETAAIKAAHGGGAAGTPFARGLSAVYTRATIEAAAGEL EGGGAPDEGSRYLVCVVDKEVDAMGTEGFEVKIGVVAIEVSTGEVVHGEFMDGVSRNG LEAVLLGLAPVEVILGTPISSATEKLMVAYAGPTSNVRVERTSRLCFSEGGALAELLS LFEKSGVDAPTVENGRHLMEMNEENNNPRGIEGIMAMPELVIHALALSVRYLKGFGMD RIICFGSSFQPFTANTEMSLSANTLQQLEVLKNHSDGSLDGSLFQTMNNTCTAFGSRL FRHWLTHPLCDRNQICTRHDAVSEISESIGSQQYSTNNLQDEVDMSCSSSVRSDLSTI LSSVLRMLAGTLDIQRGITRIFHCKATAKEFVGVVQAILTAGKQLQKLVLEDTDTMSS QHRTVHSPLLRRLINTASSCTVLANAATLVSCLNKDAADQGDMLNLFIASVDQFPEVA EGHATVEMAKQKLELLITEYRKQLGVRNLEFKTVAGTTHLIELPVDRKVPSSWMKVNS TKKTIRYHTPEVSKNLENLLLAKEKLAVICRTTWNNFLMDFGRYYAQFQATVKSLATL DCLYSLATLAKQNKYVRPNFVRENEASQIHIKDGRHPVVNMKIIFYCATDTISNTTGR SHTVMHTSCEAFSLC</aaseq> |
| Gene Sequence |
<dnaseqindica>5021..5131#4399..4470#4044..4304#3752..3883#3314..3565#2457..2708#2222..2320#1761..1925#1461..1655#141..1043#agtgggccagtggctcaccgcccacttcaccggtttccggcgtccggcgcggcgcctgcagaagagcccctcgaaaacccctaccccccatagctgcccacgtccccccgtttcccgcgcccacctccaccgccatcgccatgggcaagccgaagcagcaagtgctctcccgcttcttctcccccaagccgcggccctccgcccccgccaccgccgacgatccgccgcctccgcctagacctcccgccgagccgcccgtcgccgccgtcgtctccttctcgcccgccaagcgcgcgcgcgccctctccgtctcccccaaaaccaccgccaaaagggccaagccctcccctcccccttccgactacgttcgccgcaggctgctcgaaccgccccggccgcccccgcccgccgctgtgaaccctagcggcaaagcttacaccccgctggagcagcaggtggtcgacctcaaggcgcgccaccccgacgtcctcctcatggtcgaggtcggttaccgcttccgcttcttcggcgaggacgccgccgtcgccgcctccgtgctcggcatcatcgcccaccccgaccacagcttcctcaccgccagcatccctaccttccgcttgggcttccacgtccgccgcctcgtcgccgcggggcacaaggttggcgtcgtccgccagaccgagacggcggcgatcaaggcggcgcacggcgggggcgcggccggcacgcccttcgcgcgcgggctctcggcggtgtacacgcgcgccactatcgaggccgcggccggggagctggagggcggcggcgcgcccgacgaggggagcaggtacctcgtgtgcgtggtggacaaggaggtggacgccatggggacggaggggttcgaggtgaagatcggggtggtggccatcgaggtttcgaccggtgaggttgtgcacggcgagttcatggacggagtctcgaggaatggccttgaggccgtgctgcttggcttggcgcccgttgaggtcatcctcgggactccaatatcctctgccacggaaaaggtatacctgtgcggtttgtgatgtgcgaattgtaggctacctgatttgttataatctgcaagtaattccaggttgtaacttacctggtctgttttctcagctattgtagttgttctaaatggaaacttatttaggattgttggtggaaagactcacagtcatctgggtagtttggcagcaatagttcggcattttaaaatttctcagcaaaaaaagaatgattgcttgttgactctgccaaattaagttctagcaaattattcctatagtgaactttggaagggttatttgccttacagtttaatgagttccccccagaattgtttaaagttcttacaatctgtgtgaaagttccttcctgttttgatgtgcttgagacccctctgtttgatttgttctgttctacatgttgtccagctgatggtggcatatgccgggcctacctctaatgtccgggttgagcgcacctcgcgtctttgttttagtgagggtggtgctttagctgaactgctctctttgtttgagaagtctggggttgatgctccaactgttgagaatggcagacatttgatggagatgaacgaggagaacaataatcctcgtgggattgaggtaccgttaagttcttctgaactcactgtcatcgcaccttatgattgggtctccatatgtagtttagtaagttccaatttctttttttctttttggttcaagcagggtatcatggctatgccagaactagttatccatgcactggccttgagtgttcgctatctcaagggttttggtatggacaggataatctgctttggttcttcatttcagccatttacagctaacactgaaatgtctctgtcagcaaatactcttcaacaacttgaggtagacttttatacaacaccgccaaagtaaattttttgtttgcatatatatgaccttctgtttatttactctgcactgtctgtaagtctcatcttgaatcctaactatatggaagaaagtgcatcctatcattaaataatatatatatatatatattatttaatatgagacttacagttggcttttcttagaaacacatggatcacgtcaactttttgtttttatgacctatgttcttaatacacttttccactccattcttccatatatgaaagtaacacctggagtgctttcaggtattgaagaaccactcagatggttcattggatggatcattgttccaaactatgaacaacacatgtacagcttttggatccagattgtttagacactgggtaagactctgtaacctggtcatggaatgaatattaatccatgatgcatcatatcactatgaaaagtgataactagacagctattgtttatcttgactattgtcttaaaggtctttggttgtgacatttcttgcagctgactcaccctttatgtgatagaaatcaaatatgtactcgtcatgacgcggtctctgagatctctgaatcaattggatcacaacaatattcaactaacaatctccaggatgaagtggacatgtcttgctcatcttctgtgagaagtgatctgagcaccattctttcatccgttttgagaatgctggcaggaactcttgatatacaaagaggaataacaaggattttccactgcaaagccacagcgaaagaggtcaaatatttattattccttttcggttctagacttctagttaatttgataatgacacctaattatgctagtttatttcattaaactgacattatacagcatgaatatcctgcttagactaatcccttttttttattatactctctgttcagactgtacatttttattatttactgtccaaatattcccatgatttcaattcaatattcatgtaatcagggtacttcaaatgatactcccttcgggctgataatacttgtcgttttagacaaggatgaggtcaaattttagaatctttgattatgaatcatttttaaaatatttgtctttcaaatatggtgactacatgtatagattagtcttaaaaagtactttaataaaatcatatatttgttaacatttttatacatattataatggaaaataatggtcaaagttgttttttggagaccgtgcccttgtccaaaagaccaaaacaacaagtattatcaacccggagggagtaaatgttatgctgctgaaaaattatggcttggttcttatgccaatagttgactggtgcattctgttcttgacgcctgattgcctatagttttgtattgtagtttgttggggtcgtccaagctatcctgacggctggaaagcaactgcagaagcttgttcttgaggatacagacaccatgtcttctcagcatagaactgtgcactctcctttgttgagaaggctaataaatacggcttcatcatgtactgtcctggctaatgctgcgacacttgtgtcttgtcttaacaaagatgctgctgatcaaggagatatgctaaacttattcattgcatctgttgatcagttcccagaggtataaccttctcttttagggcttgtttggttaatccccatgagggagggaattggaggggattaattccacaccccttcaattcccttgtgggagggattaactgaacaaagccttaatggaatgatcttgttattccctagtttttatgatgcatcgtcttcatatttgaaaaaaaaattataggttgcagagggtcatgcaactgttgaaatggccaagcagaaattggagctgttaattactgagtatcgaaagcagcttggtgtgcgcaacttggagtttaaaacagtagctgggacaactcatttgattgaagttaagtcgcttaattgaattcagttaacttctaactattgttaattgcagttccaagtagcaaatgatgtccatgagaaaagtagcacagagcaaaatattttacagttttgttatacgattaatattaccatcatcatgtcatatcttgtgcctgcagctaccggtggatagaaaggtaccttcaagttggatgaaagtaaacagcaccaagaaaacaattagataccacactccggaagtctcgaaaaacttggagaatttattgctggctaaggaaaagctagcagttatctgcaggacaacatggaataacttcctcatggatttcggcagatactatgcgcagtttcaagcaactgttaaatctcttgccactctggactgcttatactcgcttgccactctcgcaaaacaaaatgtaatagactgttcttaacccttttgtgctcatctttttacattcactttgttccaacagtacattgctaaacaaccaatattccatctgccagaaatatgtacgaccaaattttgttcgtgagaatgaagcaagtcagattcacataaaagatggccgccatccggttagttttggatcacttcccactccattcctaatatgaatgcaacttcagtttttaacaggcaaatcacaaacagtatcattgcattccttttattagttgtaatacagtactgcctcacaagttttgcatccctaagaaaacaaatagaagaacctgaaaatttgagatactcatactgcagttgaggggattagttctattggtcaattttaattactccttccttttggctgtacatctaccgtgctttgggcattttggtcttttcaaatatttaggtacctaggttttgtaagggaagtcgtgtgtacagatttgtcacgaaaagtactttcgtaatatttcaatttgatcgggtttttggccactggtggtcaaagttgtttttccaaggccataccattgttcaacacgttattatatctggcctgagtagagtagttgcatgaaattgcatgcatgtttcaactttaagagctataaagaatagtgtcatgataactgcatgctttcttgaaagcttagattttacctacaattatttcaggtggtcaatatgaaaataatattctactgtgccacggacactatttccaatactactggcagatcacacacggtcatgcatacttcatgtgaagcatttagtttatgttgacaatgtttgtatttctatgctgttggtttttaggttctggagtccctacttggagtcaattttgttccaaatgataccgagcttcatgcaaatagtgagtactgccagattgttacaggaccaaacatgggaggaaagagttgctatattcgtcaagttgctctaattacattgatggcccaggtataaatattgtctcacacttgtagttcactcatgttaacatgttctggatgtataacatagttactgcaaacttagttgttgggcttaggacctgaggaagtaagggtttactttgttgttatcttaccctgactctgagattatcctaacacttggtacactgatttccttaggttggttccttcgtaccagcttcatcagcaacattgcatgctgttgatggaatttatactcgaatgggcgcgtccgatagtattcagcatggaacaagtaccttttatgaggagttgagtgaagcttccaacatattgcataactgctcatctcggtcactagttatcatcgatgagcttggtcgtggtacaagcacacatgatggtgttgctatagcttatgctacattacactatcttctgaaagagaagaaatgcatggtaatttttgtcactcattatccaaagattcttaatattctgagagaatttgaaggttctgtcggtgcataccatgtctcatatctagcaacacggaaactgttggaagtagctgatagacagatggtgattaacaacacagagacaaaggatcttggtgaaatcactttcttatataaacttgttgctggagcttcagacagaagcttcggtcttaatgttgcgctgcttgcacaggttagttttaagttgtcatgtctttttgtttctatatttctagtttggtccaaatttgattagttattaagacatgtgcttaataccatgacttgcaagtgaccacctttcttcccttgtactctagactgattgtagaataacgacatacattcttcagtttgcttgttgctgtctatatagggaataggttctagttttgggttcattgttttagtacaggaaataagtcctctgttttcttcaatgacgatgcatgttgtggttaatttttgaagtacccttcctcctttgcaagctgagttacagtttgaagtgaaacagtgcttatgatctccttgtttttgttacttgtttgctgatatgtgttcctatttgcagcttccatctagctgtattgagcgcgcttcagtcatggcagccaaacttcaacaggagttaagtgagcgtgagaaaaataagttttgtaggctaatggacgttccacgggaaagctctccgaaagagctttgtgcacagccttatcaagggctggctgaagcatgccacaggatactatttaacgttacatctgctcaaagtaatgacgagttaacggatacactatcttctttaagggaagccagggaaattgccttgaaggcaataaaaggctggtgatcatgttcttcgaagcagtggatacttcaccactggtttccttttgtttttttgaagggatcaggtattgatgctgttccattctgttcaggtattgcttcgttctagctactagtttctaatgtagtgccttgactgatctttgcatgaaggtggcatcttctgataatctactaaaaatttatcgaagatgattttgggactaatgttatttatcgaagacgattttgggactaatgttagccattgtgctaatggcagcagtgtagactgtaaaatatagtggatctggaaggtggaggaccttgaagttaaagccaactctatggaagagcaagtaacttattgtaaatctgtagttacagcatcagttgatgtatccagacttgtccaaaccatattaaagctttgcctccattttgaagtgtagatgcagaaatgagatgcatctcttatatcct</dnaseqindica> 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| External Link(s) |
