Difference between revisions of "Os04g0684500"
(Created page with "{{JaponicaGene|
GeneName = Os04g0684500|
Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein|
Version = NM_001060845.1 GI:115461419 Gen...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0684500| | GeneName = Os04g0684500| | ||
Revision as of 20:02, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0684500 |
|---|---|
| Description |
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein |
| Version |
NM_001060845.1 GI:115461419 GeneID:4337454 |
| Length |
11398 bp |
| Definition |
Oryza sativa Japonica Group Os04g0684500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:35358477..35369874 |
| Sequence Coding Region |
35358534..35359316,35360248..35360375,35360822..35360962,35361183..35361269,35361354..35361507 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:35358477..35369874 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:35358477..35369874 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcagttcctctcgctctccgccgccgccgcctcctcgccggcggccgccgtcctcccaccgaagccattcaaacccctctcctccgcggcccccttccgtcgcccctccccgcctccgccgcctccgtccccggtgccctcacccgcgccaccgccaccgccgcatcgcccttctccttctcctcccccgaaccccctctcctccaagctatggctgtccagcaagctctccccgccgccccccgagacactagagcagccagagccttctactactactactactactaccccgccgccgccggaaccggaggcggaggcggaggcgcggcggcaggaggaattccggcacaaggggaaggtcttcgtcgggaaccttccactgtgggccaggaaggcggagatcgccgagttcttccgccagtttgggcccctggagaaggtcgagctcgtgcgcggccacgacgatcccgagcgcaacgtgggcttctgcttcctatactacggaggcgacgacgcggacgccgcggcggagcgtgcggtggaggttgacggggttgacttccgtgggaggtcgctcaccgtgaggcttgacgacggcaggaaagggagggccagggctgagcagcgggcgcgctgggtgaacgacggccggaggcgcgagccacggtcgccgtggcacgagggcagggacgaggcgtgccgtgagttccgcagggtggtggaatcacggcccgacaactggcaggccgtcgtctctgcattcgagaggatacccaagccatcaaggagagaattcggtctgatgattgtttattatgccaagcgaggtgataagcatcatgctcgtgcaacatttgagaacatgagagcaagaggaatagagcccaatgcatttgtttttacaagccttgttcacgcttatgcagttgctagagatatgcgtggagctctgtcttgcgttgaggaaatgaaatctgagggtcttgagctgacaattgttacctacagtatccttatttcaggattcgccaaaattaatgattcccaatctgcagataacttgttcaaagaggctaagaccaagcttagcagtctcaatggaatcatatatagtaacatcatacatgctcactgtcaatctggcaatatggaacgggctgaagaactggtgcgtgaaatggaagaggatgggatagatgctcctatagatgtatatcacagtatgatgcatggatataccatcattcagaacgaaaataaatgtctagttgtctttgaacggcttaaggagtgtggctttaaaccatcaataatctcttatgggtgccttcttaatttgtatgtcaagataggtaaggttgccaaagcattatctattagcaaagaaatggagtcttgtggcatcaaacataataataaaacatactctatgcttatcaatggatttatccatttgcacgactttgcaaatgctttcgccatatttgaggaaatgctaagatcaggtctacaacctgatcgtgccatatacaatttgcttatagaggcattttgtaagatgggaaacatggatcgtgctatttgcattttggaaaaaatgcagaaggaacgaatgcaaccatcaaatagagcattcaggcctatcatagagggatatgcagttgctggtgatatgaaaagtgctttggatactcttgatctgatgcggcgaagtggttgtgttcccactgtaatgacttacaatgctctcattcacgggctagttagaaagcacaaggttcaaagagctgtctctgtgcttgataagatgtccatcgctggcattacaccaaatgagcatacatacacaatcattatgagaggttatgctgccagtggagatattgggaaggcttttgaatacttcaccaaaataaaagagagtggtctaaaactcgatgtgtacatttatgaaacattgctcagagcctgttgcaaatcagggaggatgcagagtgccttagcagtcactcgtgagatgagcttccaaaagataccaaggaatacatttatatataatattttgattgatggatgggctcggagaggtgatgtttgggaagcagaggacttgatgaagcagatgaaagaagatggtgtccctcctaacatccatacttatacctcctatataaatgcatgctgcaaggcaggagacatgcagagagcagaaaaggtgattgaagaaatggtagatgttggactaaaacctaatgtcaagacatatactaccttgattaaaggttgggcaagagtgtcacttccagacagggcattgaaatgctttgaggagatgaaacttgctgggttgaaacctgatgaggcttcttatcattgcttggtgacttcacttctgtcaagggcaactgtaatggagggaagtacctacacaggaatcattagtgtctgtagagaaatgtctgagaatgatttgactgttgatcttcgcactgctgttcactggtctagatggcttcacaagattgagaggactggaggggcactaacagaagcgcttcagagaatatttcctcctgattggaattcattagaatttttaggagagccatccagttctataagcatgggggagtctgatgattacagtgattcagattttagcggtgatgaagatgaggatcataatattgatgatagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MQFLSLSAAAASSPAAAVLPPKPFKPLSSAAPFRRPSPPPPPPS PVPSPAPPPPPHRPSPSPPPNPLSSKLWLSSKLSPPPPETLEQPEPSTTTTTTTPPPP EPEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPER NVGFCFLYYGGDDADAAAERAVEVDGVDFRGRSLTVRLDDGRKGRARAEQRARWVNDG RRREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAK RGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTI VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELV REMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYV KIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPD RAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPR NTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEK VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTS LLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHWSRWLHKIERTGGALTEALQR IFPPDWNSLEFLGEPSSSISMGESDDYSDSDFSGDEDEDHNIDDS</aaseq> |
| Gene Sequence |
<dnaseqindica>58..840#1772..1899#2346..2486#2707..2793#2878..3031#4820..4879#5270..5698#5775..6070#6529..6658#6941..7438#gtccgcatccaattcccgggccattcgaaatccccaacaccagtagccggccgcggcatgcagttcctctcgctctccgccgccgccgcctcctcgccggcggccgccgtcctcccaccgaagccattcaaacccctctcctccgcggcccccttccgtcgcccctccccgcctccgccgcctccgtccccggtgccctcacccgcgccaccgccaccgccgcatcgcccttctccttctcctcccccgaaccccctctcctccaagctatggctgtccagcaagctctccccgccgccccccgagacactagagcagccagagccttctactactactactactactaccccgccgccgccggaaccggaggcggaggcggaggcgcggcggcaggaggaattccggcacaaggggaaggtcttcgtcgggaaccttccactgtgggccaggaaggcggagatcgccgagttcttccgccagtttgggcccctggagaaggtcgagctcgtgcgcggccacgacgatcccgagcgcaacgtgggcttctgcttcctatactacggaggcgacgacgcggacgccgcggcggagcgtgcggtggaggttgacggggttgacttccgtgggaggtcgctcaccgtgaggcttgacgacggcaggaaagggagggccagggctgagcagcgggcgcgctgggtgaacgacggccggaggcgcgagccacggtcgccgtggcacgagggcagggacgaggcgtgccgtgagttccgcagggtggtggaatcacggcccgacaactggcaggccgtcgtctctgcattcgagaggatacccaaggtgtggcttctcatctcaaaatctattttctgctatttccggtgaataataggacatcaattgcatattatgtattttttttgaaaccaaaccaattgcattgttataggtgtacacgtgtgtgttttcaagaatgcaaagcaggtgaagtttttctataagtaattttgcaggaagcagtaccgttcgcataggagtcctacaaatgtcatctgtatttcggaatagggattaatgtgccactgaataggcacatctttattatacaatgcatgtttgaatttacatgttagcaaacttgtcatgaaaattgtcatttcaatgccatcttcagctgtctggtgtagttagcgcatacttccctctttgtaagcaaagtttggatgtcctggatcttacttacccatttctttttaaaaaactgctccatgaggtaatattcattacacaaataccagatgcttcatcttttcctattagatttgatgctaattcatgtagtcaatatatcatatagttcactagttcagtatatttgttattttcttttagataatggatcctttattgaactcattaaatcacatcgaggtgatacaattgtcctcccgacctttgcattataagttataacttttcttgagaataggtatacaattacttcattgagatttctggttagtgagtgagcaactatattttttcgaataaaattataaaatgtgccaattcttaatgttcaaaaatctctacattcatggttatgtgttcacatcttcccaagaaagttcaagtgccacaggagaaaaaaacaggtctagctgatgcttattgaatttattgcattgaagatagaggcatctcataactcatattaccattagtacattgttgtatgcaatgcattgacacttctatcttgatgtttcagccatcaaggagagaattcggtctgatgattgtttattatgccaagcgaggtgataagcatcatgctcgtgcaacatttgagaacatgagagcaagaggaatagagcccaatgcatttgtttttacaaggtaggtttattctttctgctatttgcaaacgttttgttgctgttcttttccaatcatggacaaactggtgtaggataaaatgtgtagccagaggatttgtgtaaaaaaaaaacaaccctgaaacagacaggctacagaatttttactacgtaaagataagaacttacatgagataaacatcacgagggaactgaaagaacagttggtaaggaaccttacacagaatcagactaattggttccttggatcctggtttgccagcttgagataagaaaatgttcactgataaaattgttgacatagaaagccatgtaactttcatggtgtaagcatatatggtgcaactgtttatgcctggtatgttagctttagcaaaatctttatgattgctctaattgctgcttgttgatttgcctcctgcattaaatttacttcatttcatgcagccttgttcacgcttatgcagttgctagagatatgcgtggagctctgtcttgcgttgaggaaatgaaatctgagggtcttgagctgacaattgttacctacagtatccttatttcaggattcgccaaaattaatgattcccagtgagtattttctgctcattgactagagcctgttctacgtactactctcacatgctttgttcagaatgaatgatagatctgttatagctcttttatgcgtagcatattctcattcagttttaaacatttctctgtgcatttggccacttaaacattctctcgtctttcttggcccaaggaccctgactttttgctaatatttttttatcttgtttgaaagatctgcagataacttgttcaaagaggctaagaccaagcttagcagtctcaatggaatcatatatagtaacatcatacatgctcactggttagtatttgtcagatttataaacctcttggaacttaacactgatatgagattgatttaacactaaagtacctgtacttgcagtcaatctggcaatatggaacgggctgaagaactggtgcgtgaaatggaagaggatgggatagatgctcctatagatgtatatcacagtatgatgcatggatataccatcattcagaacgaaaataaatgtctagttgtctttgaacggcttaaggtatagtggaaactgtcttctcatgggtaaccgatctggctttcttatatttctattaagtccagtttggtcctcaatccttcttgtggtctaattttcatttcatggccagcttcaagaccatttagtttacacaactaaaatgccaaaactggtacaaataaccccttgtattcaaatcatcgtgttattatcccattttactgtgacaaagacacattgacaacttgaattaccattgaggttggtgagtcagcacttttttttttttgagcaagggcgactgcccccatttctattacccgaaatggaacatagtagtttacagagtgcaaggaagaaagacatgaagaaacagcataagggctagaaaagacaacaaaaggaagattacaggtttctcattcaacaggaattccacaccaccgtgcatatgaccctccatcaaccgaagccgaaagcacaaaaacaacccctcaaccatagcaaaagctcttctgacatcagtatgctgggccaaaccaaaagaacatcaactttcttttgtgttcctgaagccatgtaccttcatccttccagtcttctcgtcctagtgtaccatccatacttcgagctgaaaacatcatttgctacctgccttattagcctggctcccagaagcaacttttcttgatttgcctccaacatctgcagcacagcccaagtttcaatccaatgacaagtcaagtaaactacatcaatgggatcttaaaacggatgggacctgcctgctgtcctgttctgtttttgctccttatctctccctccagatctggtaatcttatatctccaggatccaagtttctttcagattccgtcagttagctattgtaaccagtcccttggccagacctcacctctggttttatttggagcaaacgaaagtaccaactcaactcaaagatattttggaattcatggctggtaatcaaagaccgattcaagttaagaaattcatttctggattttccagatagtgagcaaaagaaacaatggggcacgacaattgcaggcccatggtaggaagcatagcagaagctgtagtagggccaggagcagtgaagtgagaagcttatctgccctgattctggcagcagcaacaaagtgccagaagtccaggagtgggtgagaaaggagaggtgggaagtgggaatttctggccatggtggtgctgctcagccagaaaccttagtggtgctgaccagcgatgaaagtatggaactaatgtgctttgtgatcatattatccatggaagctacaagaatgaaaccacaccctttcctctcattaatttctgtatgttccttttaaatatgcatatgcattgatgtttaggtgtatgagtatttttttgggaaaatgacctatctgcatatcactgcattgcatatctgtacagtatcggagtatctgggaaacacagatgatgaagttacttgatctgtggatacaactttgtatcatcgaggatggtgtcaaggaaatgaggaagagaaaaaataagcatatcgctgttatcgggccacaccaccctgtggactaaaatggaggcggttttagctcagggatgtaatttgcacctgttttgatatttggaagacctgtgataaatggttctaaagtttaagggtgaaatactgaaacgtaaaattagactacaagaggagttgagggaccagagatagatgtattcataatttttattttttctatctccccttctgatctgatttttcctgttttttgcaggagtgtggctttaaaccatcaataatctcttatgggtgccttcttaatttgtatgtcaaggtaaaagtaattctgttgcgtgctttcttgtcagttttcctgtaattttgtgtgttcccttagtagaaggaaacaaaaaattgtgcatcccagacaagtgtttttttccctcgtaaattatgatgtttaaacactcctttctgcaccattgatttctattcgttatatgactagtattctgaatatctaagagtccttggattcacctttttctgaaagcctaaggcaagggaagctttatgtcgagtttcttatacattgaacatgacaatcttcaactttgaaactcaaacctgcccctttattattaattgtaagataggttacttgagacaactcttaacagtgatcactgatgttgctctggtttcttttcttttctcttttcagataggtaaggttgccaaagcattatctattagcaaagaaatggagtcttgtggcatcaaacataataataaaacatactctatgcttatcaatggatttatccatttgcacgactttgcaaatgctttcgccatatttgaggaaatgctaagatcaggtctacaacctgatcgtgccatatacaatttgcttatagaggcattttgtaagatgggaaacatggatcgtgctatttgcattttggaaaaaatgcagaaggaacgaatgcaaccatcaaatagagcattcaggcctatcatagagggatatgcagttgctggtgatatgaaaagtgctttggatactcttgatctgatgcggcgaagtggttgtgttcccactgtaatgacttacaatgctctcattcacgggctagttagaaagcacaaggtatttttcaagtacatgctagtttcttcaaatctaatcctgtcatgtggcatttactttaaatttgtgtttataggttcaaagagctgtctctgtgcttgataagatgtccatcgctggcattacaccaaatgagcatacatacacaatcattatgagaggttatgctgccagtggagatattgggaaggcttttgaatacttcaccaaaataaaagagagtggtctaaaactcgatgtgtacatttatgaaacattgctcagagcctgttgcaaatcagggaggatgcagagtgccttagcagtcactcgtgagatgagcttccaaaagataccaaggaatacatttatatataatattttgattgatgggtaggtgttctagataagctctttagccaatgtttttactgactagtaacgatctttttaccgactcagtactcagggacgcttgtgaccatttatttatgtgttgactgcatcgaactacttagtcaactgctgtactgactcagggatacaagaaagtattatggaaaaaaataatatagggggtagagaacaacccctcaatatttttagtagaaggttgtggttgaacctgtggagggctagcacagcgaactgtgctgttagccagtaggtcctaatagtctcctcacatgaaactattatgatatttcatgggattagtcatacattagttttgaaaatttgtattatatactgagttcatgttttatttgagtcttgctgtaatttatgaagttttataaaagcggtatattttcctttttgcctgtttcgtcacaaatccttttgtgtagatgggctcggagaggtgatgtttgggaagcagaggacttgatgaagcagatgaaagaagatggtgtccctcctaacatccatacttatacctcctatataaatgcatgctgcaaggcaggagacatgcaggtacgagaattttgcattggaatacttagtttcttacttattgtgagttgtaaccgtgtagtggagatagcctgattttgataggatatgtgcacatgttttaaggtagctgaccaaaatattttacaatgccatgactatatgcccgaattatttcagcactacagatttacctaggtggctacatattcaaatttggcacttgtgaatggagaagtattctcttggggccttcttgtaatctatccaattatttttttttataaaatgatttgtttgtagagagcagaaaaggtgattgaagaaatggtagatgttggactaaaacctaatgtcaagacatatactaccttgattaaaggttgggcaagagtgtcacttccagacagggcattgaaatgctttgaggagatgaaacttgctgggttgaaacctgatgaggcttcttatcattgcttggtgacttcacttctgtcaagggcaactgtaatggagggaagtacctacacaggaatcattagtgtctgtagagaaatgtctgagaatgatttgactgttgatcttcgcactgctgttcactggtctagatggcttcacaagattgagaggactggaggggcactaacagaagcgcttcagagaatatttcctcctgattggaattcattagaatttttaggagagccatccagttctataagcatgggggagtctgatgattacagtgattcagattttagcggtgatgaagatgaggatcataatattgatgatagctgaaaaactctagattccagagcctgtttttcttgttctgtgccctcactttttgtcctttggttctgccagagtggatgaccgaacaaggtattatgtgttgaactgttaatatgtgtttaatatgccatttccttttggtgatgtttctaaaaagcacacataataattcttgaaaaggagtctgccaacaatcatttgtcattactcattgccactttttggagttcctggaaattgcattgaactaacactctttgtttccatggcagcaatgtctttgatcaaactgtgccctcacattcagacaccagtggcttgtggactatccaagagcgtttggaatcttatagtgcaataagcgtgagctggctggcctctgctgcgtttcttcaagagcaacagtcagtaacagttctactgggactgaagacacaggctgtcaatgcaacagacgaagcttactcagttatgcgtgtagctgtacatatcaatggctggcacaggtaaatattcttgagatattgacagattcaattgttgtttctctccatcctttcagtatagtccaacttgatataaaatccaattccatatatatgtgtataaatgcaagtaaagctataccacgttaccagttaccacccacaccccttcttggcttgccttttgtagtgtgccatgtgaaatgtaccgaccatgatagagcctgcgtgcccatttttcaacatccaaatgttaggagtggtaggagcgcttataggcatatgcttgaacaccactttgattggcagaattttgtaggggcagcacagtgtgcctacaaggtttggttttgtaaccacatccctggacaagccgttcgatgcttatttgaatactagtacgacaaaccaatctgtgtcgtggtgctcgtaaaagctgagatcatttaaacttgtaagtagaaagttggacgagcttttttctcttcgagagaatgcacaggccctcatgttctttgttttgatgatcttaaaaaaaccatagtcaaggtaaataggagcaaagattggtatcttgcacattattgcgggttgggcttattcaatgggggaattccctattgaaactgaagtacaagtccaatcaagtgctagatgatgactgttttctcatttaaggtttggcatcttccagtacagcagcttcaatcaaatgggccttaacgtagctcagcccgattcaatattacttggaattgcacgcctctgtccaagctgaaagcttttactagtaggacacttgaatgcctgcacaagacggcattaatgctgtgcttatgagcccgatttcttgagactggtgttgagtttgtgcgtatgtgtgtgctatgagctgcgaatcttagctggccggtatctttcattgaatcgaaagtggcctccccattcaagtcttgcccacaagataaaacagtgcttcatttatgcctgttatttaattttgcttagctgcatctcgcttctccattcatacaccataaattctttcaaagaaatcttgattgtattagtgttgtattaggcctttgttcggagagaaaatttcatagtaccaattaccccctccatcccaaaatataataacttctatcactaagagtttgttccaaaataaaataacttatccaccaacattctcttcctaactaatcataaccctgcaccatttaatttttccatctacctccacttctcaaccaatcacaatatcatcatatttaattctatctactttcttaataattgtgtttaatcctaaaatttcttatgttctgggacggagatagtagcatgtatgaacagtatgaagtactacaatgtaaatattttgcctgaaacatgctttgttttttttcatgccaaataattcagtgtgatatttggtaattcatacagtattccttccttttatacccactctagtttcaaatacttgtcactagttactacttactactagcttttttccctaaaaaagttactagctttttagctttgatcactcgccctttttgcaaaaatgaaacatatgtatacttaaaatatgttgcattagcgatgtgtgttccataaatacaaccagacaactttcactaataataacttaatctttaaaagttattaatggttaaaggtgaaacattatggttaacattgacaagtaaataaagatggaaggaatacatattttctaaagataggtacggtcctacaggctttgtccagcaaaaaaaaaaggacagttctgcagaacaaaaatattttggtggagtttttaaacattgcatccaacagaagccttatggtatattttttttctatgataagagaatttattctggttttttacttaaaagaagctgcaaccaattattatagaatttgcagaatgaatagctg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