Difference between revisions of "Os04g0686200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0686200| Description = Similar to Chromosome condensation regulator protein (Fragment)| Version = NM_001060860.1 GI:115461449 GeneID:4337469...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0686200|
 
GeneName = Os04g0686200|

Revision as of 20:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0686200

Description

Similar to Chromosome condensation regulator protein (Fragment)

Version

NM_001060860.1 GI:115461449 GeneID:4337469

Length

7226 bp

Definition

Oryza sativa Japonica Group Os04g0686200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35467170..35474395

Sequence Coding Region

35467475..35467592,35467711..35468228,35468789..35468935,35469013..35470986,35471688..35471813
,35471902..35471988,35472059..35472148,35472449..35472535,35474063..35474089

Expression

GEO Profiles:Os04g0686200

Genome Context

<gbrowseImage1> name=NC_008397:35467170..35474395 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35467170..35474395 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagatcccgtcgatatcgacaaggcacttattgctttaaagaaaggcacccaactgcttaaatatggtcgcaaggggaagccaaaatttactcccttcagactatcaaatgatgaatcaacactaatttgggtctcaaataacaaagagaaaagtttgaagctatcatctgtgtctagagttctctcgggacaaagaacattggtttttcaacgttttctgctccctgagaaggaccatttatccttctcactcatatataatgatggcaagcggtctcttgatctgatctgcaaggataaagttgaggcagaagtatggtttgcaggccttaatgtattgatatctcctggacagcatggatcccaacaccaacacattgatggaatacgcaacggtgccctgtcttttgagtgtggcagagatagtagcctaagcagtagctctgcttatacaacggattcctttgagaataagttgagctcagcgaattctgccaaggatcgttcttcaggagaatttacatattcagaaaggacagatgtgtcagatatgcaagtgaaaggtgcttcttcagacattcgaatcagtgtttccagtgctctcagcacatccagccatggttctggagatgattctgaatcttttggagatgtttatgtatggggggaagtcatgtgtgacactacttgtaggcaaggatctgacagtaatgcttactctgctactgcagctactgatattcttgtaccgaagcccttagagtcaaatgtaatgcttgatgtcagttatgtggcttgtggtgtgaagcacgcggcactggttactcgacaggcagaggtatttacatggggagaagaatgcagtggccgtcttggtcatggggccggcacaagcatttttcaaccacgtcttgttgagtcattgtctatctgcaatgtcgaaacaattgcctgtggtgaattccatacttgtgctatcactgcaactggtgacctttacacctggggagatggtacccacaacgctggactccttggtcatggaagtaacgtgagccactggattccaaaaagagtttcaggtcctttggagggccttcaggtgtcagctgtttcttgtggcacatggcatactgctttgataaccagttctggaaaattgtacacgtttggtgatggcacatttggagtcttaggtcatggaaatagagaaactatttcatacccgaaagaagtggagtcattgaagggtttgaggacaatttctgtttcatgtggggtgtggcatactgctgctgttgttgaggttatcatggcacagtcaaatacttcatctggaaagctatttacatggggtgatggagataaatatcgccttgggcatggtgacaggtcttcaaaactgaaaccaacctgtgtgccttcattaatagattacaatttccataaggctgtgtgtggtcatactctaacaattggattgactacttcaggccatatatttactgctgggagctctgtgtatggacagcttggcaatcccaataatgatggaaggtatccacgcctagttgaagagaagcttggtggtggtggtgttgtggaagttgcgtgtggagcttatcatgttgcggtattgacacagagcggtgaagtctacacatggggtaagggtgcaaatggaagattgggtcatggtgatattgcagatcgtaagacacctacatttgttgaggctttaagggataggtctgtaaaacgcatcgcttgtggatcaggcttcacagctgcaatttgtcaacataaatcggtgtctgggatggagcagtctcagtgctcatcatgcagacagccatttgggttcacccgaaagaggcacaactgttataactgtggattagtacactgccattcctgcagttcaaaaaaggctctaagagcagcattgtcccctaatcctggaaagccatatcgcgtatgtgattcatgttacctgaaactaagtaaagttttggattctggaatcggtcataacaagaacaatacgcctcgcataccaggtgattccaaggctgataaaatggactcaaagggaaacagagttgcatccgctaatagctcagatatgatcaagaacttggatgtgaaggcagcaaagcagacaaagaagtatgactatccaccacagttccctgcgattttgcagctgaaggacatccctttcattggggctgctgaccagcaacctaatgactccacatatagttcacctttgttgaggctgccaaatctgaattcttctagttccttgtcctcagaaagctttgatattcttagagatgcaaatgaacttctgaagcaagaggttcaaaaactaaaagaagaggttaacagcttgaggcagcaacgtgaacagcaagatgcagatttgcagaaatcagaggcaaaagctcatgaggccatgaccctggcctctgaagaagcatccaaatcgaaggctgcaaaggatgttattaaatcactaacagcacagctaaaagaaatggctgaaaggcttcctccagcatcatgtgacacgaagcaaacacggcagccttatctacctggtggtgcagtttctcctgatacagggagagaaaaccaaaagagatatgagccaggcagcttccagtacccacaaacacctacttctgttgcatcggcccggtttaatgggttccttgctcaagcccatcaaataagtgaacccaatggtaacacgatggttccacatgacagcaggcatgaaaacaatggcaacactaaggagttcccagttgcgcagcagatgaccaatggtgggatgacggggtatcgcccaagaacagaagatcatgatcggcgggaaacagaaaggttccaaataaacctccatggtttcaacatgagaggttctagctcacccagcaaccaagtcgaagctgaatggatagaacaatacgaaccaggggtatacttaacactagtttctcttcgtgatggaaccaaggagctgaaaagagtgcggttcagccggagaagatttggagagcatcaggcggaatcatggtggaatgacaaccgtgaaaaagtgtacgacaaatacaacgtgcggggaactgatcggatttcttcagtgatgacagcgtag</cdnaseq>

Protein Sequence

<aaseq>MADPVDIDKALIALKKGTQLLKYGRKGKPKFTPFRLSNDESTLI WVSNNKEKSLKLSSVSRVLSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDK VEAEVWFAGLNVLISPGQHGSQHQHIDGIRNGALSFECGRDSSLSSSSAYTTDSFENK LSSANSAKDRSSGEFTYSERTDVSDMQVKGASSDIRISVSSALSTSSHGSGDDSESFG DVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALV TRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDL YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTF GDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKL FTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSS VYGQLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLG HGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSCRQPFGFT RKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKVLDSGIGHNKN NTPRIPGDSKADKMDSKGNRVASANSSDMIKNLDVKAAKQTKKYDYPPQFPAILQLKD IPFIGAADQQPNDSTYSSPLLRLPNLNSSSSLSSESFDILRDANELLKQEVQKLKEEV NSLRQQREQQDADLQKSEAKAHEAMTLASEEASKSKAAKDVIKSLTAQLKEMAERLPP ASCDTKQTRQPYLPGGAVSPDTGRENQKRYEPGSFQYPQTPTSVASARFNGFLAQAHQ ISEPNGNTMVPHDSRHENNGNTKEFPVAQQMTNGGMTGYRPRTEDHDRRETERFQINL HGFNMRGSSSPSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQAES WWNDNREKVYDKYNVRGTDRISSVMTA</aaseq>

Gene Sequence

<dnaseqindica>6804..6921#6168..6685#5461..5607#3410..5383#2583..2708#2408..2494#2248..2337#1861..1947#307..333#actccctgcacgaccccactccctctccactccaccacctcctcctcctccactccccacctcgccgccgcaagcgcccggccgccaccaccaccgccgccgccctcttcgtctctctatcttcaatcttcgcctaccttgtctcctccattcttcaaccttggcttccttccatttcggcgccactattctttctttttcttttcttttcctttcttttctgagtcgctgtgttggaagccagccttggaggcattcatgagcgcccgacgaccagctccatgatgaccggaggccgccgatggaatggcagatcccgtcgatatcgacaaggtactctccctctccctctccctccctccctgcacccgccgctgcctccatctcttcgcgccttttaccacctttctttctcccccatcttataccttgcgtgctgctaaatgccggcaactatcattgattgctgcaaccaaagctctagcctttccttcgctccgacaatctctgtcgttgtagccttcttgctggtgttgttgtagattcaccgcggattattgaggaacacgcacttttgacttttaattcaatgccaacaatcacaacgtgggttgcatgaatgtagccaatgctgcccctgctctctcaaatgttggcctgcctatttgcatttggagatccttccagggttatgcttactgcaatgcccaattttgggaggggaaaaaaatctgttcttttatttttttaaaaaaaaacataaatggaaggggaaattgggaacgaacaaaagaaaggtttgtcaagttccactccacatacttcgaaattttcgatgtgcaattgcaaaccgccgattgagctgtgctgaattcaattattagtcggatggaggattgttactttcactggagaatgctgtggcttatcgagtttgaggcttttttttttgtttaccgaaagagtttcaggccttgttccccctgctcgaattatcttgtgctatgcacagatatagaaaggaggagaagctggtgcattagattagtttctatatatcaagttgaattgatgcttatcgtttctagttgccattcctttcttttttatgggatcctattcttatggggtctctgatgttttgattttactcttattactccttttttttaaaaaaaaaatcgttactctctctggataatgaaaacgacagaatccctgccttcttgctaaaaagaatcatgaagttgaatttcagggtcttgtttacctacttggttcagtgcttaagataaataatgtgtgccatttgtgtgagagacatacaactagtgatgaactcagttttgtcttcttctttttttttgttaggagttagcactatctcacaaatctcatcatttaaagcatcactatctgggcaggttgtgtgattgtgtcctagaaatcttgacgatcaggaaaaagattttgagtaatcttgattatatgtatatgactgcgatgtctgctttccttcagatagatcctactcttgttttggaatctggataactgggttcttggagctaaccaaaatatcaaaatcaaaattttaacaatgtcaaaatgcaatggagaaaacaaagggacaggcagacacttccattagttacttttgttttgagggaatagacaagaagacacttggaattttcccattagcattgatgctatcgaagttttaattgtcaattacatttccaagaaaatgttctaaactctagtgatctgttattgaagttttttgctaatgttttaccaatgttctgcaccagttactctgcttcataattctgttcgtcctaatgcatctggcaggcacttattgctttaaagaaaggcacccaactgcttaaatatggtcgcaaggggaagccaaaatttactcccttcagactatcaaatgtaagtttactgtcttgtgcaaccttttttgataaaggtgatctcaaagtacggttttgaattccacagttccagcctgaaatgtggatgggatttctttttttttaaaaaaaatatctaggtccatattatgttgtttatggtgctacttacccaagagtacaaccattggagcagaaaccacttaaattattgacagctagaaaatttatgacatattaatatgaaactgagagcaatgcaacttccatttgtagttattatatgtacttacgcaactttctttttcatgctccacaggatgaatcaacactaatttgggtctcaaataacaaagagaaaagtttgaagctatcatctgtgtctagagttctctcgggacaaagaacagtaaggacttactttttaactatatggcaatttgtttcatgcatttgatcttcaacctgtttcttttcagttggtttttcaacgttttctgctccctgagaaggaccatttatccttctcactcatatataatgatggcaagcggtctcttgatctggtattacaacaaggatcaattgaactttatttcttctctttcatttctgaatgaatttcatctaatgagccctaatcttgtttcaaagatctgcaaggataaagttgaggcagaagtatggtttgcaggccttaatgtattgatatctcctggacagcatggatcccaacaccaacacattgatggaatacgcaacggtgccctgtcttttgaggtaaactctcttcaacacagaccactttgtgaatatatcattgtttgagtcatgatttcacatcatcattacagcttttttttttaagaaaaaagaaaaatctttgggcagaacgctatcagtatttctagcaacctcagttcaaagtttctgtctgtacactgtgttcaactcttgggtcattatccaccacctatgctctagtagctagtacaagttattgttgttgacgaaattcccacatgcattgctagtagtaatacgcattatccatcatgttctgagaactagcctagcatctaggaacatctcatagaagcagaaccacagttttgattattctatccaattgagcttcttgtttgattaccaactttttgtttggtgcacttttggcctaagctatagggttacatgcatatttatattattgttttacctagttcattcaaccatgttcttttactttatcttgttcattcaacatattttttatacatcatattatcttgtactgctgcttgtatgttaaataaccaataatgcattcctgtggtttattaactgtcaagaacatgctccatatctattttcaaccgaatgatctttcaattgttaatcccatgtaaaatagatgaacctcacagttacatcatggcatgctatgcttctgatttgttttttgtttaaattgcttacagtgtggcagagatagtagcctaagcagtagctctgcttatacaacggattcctttgagaataagttgagctcagcgaattctgccaaggatcgttcttcaggagaatttacatattcagaaaggacagatgtgtcagatatgcaagtgaaaggtgcttcttcagacattcgaatcagtgtttccagtgctctcagcacatccagccatggttctggagatgattctgaatcttttggagatgtttatgtatggggggaagtcatgtgtgacactacttgtaggcaaggatctgacagtaatgcttactctgctactgcagctactgatattcttgtaccgaagcccttagagtcaaatgtaatgcttgatgtcagttatgtggcttgtggtgtgaagcacgcggcactggttactcgacaggcagaggtatttacatggggagaagaatgcagtggccgtcttggtcatggggccggcacaagcatttttcaaccacgtcttgttgagtcattgtctatctgcaatgtcgaaacaattgcctgtggtgaattccatacttgtgctatcactgcaactggtgacctttacacctggggagatggtacccacaacgctggactccttggtcatggaagtaacgtgagccactggattccaaaaagagtttcaggtcctttggagggccttcaggtgtcagctgtttcttgtggcacatggcatactgctttgataaccagttctggaaaattgtacacgtttggtgatggcacatttggagtcttaggtcatggaaatagagaaactatttcatacccgaaagaagtggagtcattgaagggtttgaggacaatttctgtttcatgtggggtgtggcatactgctgctgttgttgaggttatcatggcacagtcaaatacttcatctggaaagctatttacatggggtgatggagataaatatcgccttgggcatggtgacaggtcttcaaaactgaaaccaacctgtgtgccttcattaatagattacaatttccataaggctgtgtgtggtcatactctaacaattggattgactacttcaggccatatatttactgctgggagctctgtgtatggacagcttggcaatcccaataatgatggaaggtatccacgcctagttgaagagaagcttggtggtggtggtgttgtggaagttgcgtgtggagcttatcatgttgcggtattgacacagagcggtgaagtctacacatggggtaagggtgcaaatggaagattgggtcatggtgatattgcagatcgtaagacacctacatttgttgaggctttaagggataggtctgtaaaacgcatcgcttgtggatcaggcttcacagctgcaatttgtcaacataaatcggtgtctgggatggagcagtctcagtgctcatcatgcagacagccatttgggttcacccgaaagaggcacaactgttataactgtggattagtacactgccattcctgcagttcaaaaaaggctctaagagcagcattgtcccctaatcctggaaagccatatcgcgtatgtgattcatgttacctgaaactaagtaaagttttggattctggaatcggtcataacaagaacaatacgcctcgcataccaggtgattccaaggctgataaaatggactcaaagggaaacagagttgcatccgctaatagctcagatatgatcaagaacttggatgtgaaggcagcaaagcagacaaagaagtatgactatccaccacagttccctgcgattttgcagctgaaggacatccctttcattggggctgctgaccagcaacctaatgactccacatatagttcacctttgttgaggctgccaaatctgaattcttctagttccttgtcctcagaaagctttgatattcttagagatgcaaatgaacttctgaagcaagaggttcaaaaactaaaagaagaggtattctatattctaattttttgtggtaataactaaaatatccggggaatgcgtccttatgcttatctattatgcaggttaacagcttgaggcagcaacgtgaacagcaagatgcagatttgcagaaatcagaggcaaaagctcatgaggccatgaccctggcctctgaagaagcatccaaatcgaaggctgcaaaggatgttattaaatcactaacagcacaggtgattttccgaatttattattgcacgtcttaatgttaaattggctctagctgcatattatctgccagtttcttcacttaccttatttttacttttatttttgcattgctcattcattgaaacaaaacgttggtaagcttaatttgtgacatggacagttaaaatggcactaatttcagttcttatcaacagcaaccttgtctcttatatgtgccttttgctccatgcacccacacgtgcttggaggtgcattcagcccctataaaatgattgcatattcagttgatatggatgtttctgctcatctcattgttgatcctagttgcaccttgctagtagtcatagatactaggggtgaataaaccaaggtaaacctgatttgttctttttctactgctactgcctagctgtgctttcttcagtggaacagtgacaactgtgcttgtagataattgcatatagataattatataaatcacatatagatagttgcatgttctggacttgttatatccccaactggataatatagaaattaaaaacactccccatttttgcagctaaaagaaatggctgaaaggcttcctccagcatcatgtgacacgaagcaaacacggcagccttatctacctggtggtgcagtttctcctgatacagggagagaaaaccaaaagagatatgagccaggcagcttccagtacccacaaacacctacttctgttgcatcggcccggtttaatgggttccttgctcaagcccatcaaataagtgaacccaatggtaacacgatggttccacatgacagcaggcatgaaaacaatggcaacactaaggagttcccagttgcgcagcagatgaccaatggtgggatgacggggtatcgcccaagaacagaagatcatgatcggcgggaaacagaaaggttccaaataaacctccatggtttcaacatgagaggttctagctcacccagcaaccaagtcgaagctgaatggatagaacaatacgaaccaggggtatacttaacactagtttctcttcgtgatggaaccaaggagctgaaaagagtgcggttcaggtaaccaagattcgctactcctaaagaacatattttattttgttttctctaagctctaacttgtgaaatgcgtgccctgaataagagtagcctgacatggaggtcgaattgtttacagccggagaagatttggagagcatcaggcggaatcatggtggaatgacaaccgtgaaaaagtgtacgacaaatacaacgtgcggggaactgatcggatttcttcagtgatgacagcgtagtgtgataataccagctagaagctaaattctcaaactgattcagatctcagaagagatctttttttccctcgcctaaatgtatttgatgatgctctcttcctgactatcttctcctgtactattgttgtatagaaggaatcagaattgatgatgtgtcgtatgaatagggtaatacagtgcagtgaggttgctctgttgaccatgatacgaggctgtgtatgtctgtatgtatattcgtgggagttagtggacgagtcttgagcaaaagctccttcatttacatgaatgaaacggaatgctcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0686200, RefSeq:Os04g0686200