Difference between revisions of "Os03g0109300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0109300| Description = Similar to Lysine decarboxylase-like protein| Version = NM_001055241.1 GI:115450210 GeneID:4331344| Length = 4936 bp...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0109300|
 
GeneName = Os03g0109300|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0109300

Description

Similar to Lysine decarboxylase-like protein

Version

NM_001055241.1 GI:115450210 GeneID:4331344

Length

4936 bp

Definition

Oryza sativa Japonica Group Os03g0109300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:515961..520896

Sequence Coding Region

516042..516164,517573..517670,518002..518032,519053..519152,519752..519822
,519983..520126,520543..520611

Expression

GEO Profiles:Os03g0109300

Genome Context

<gbrowseImage1> name=NC_008396:515961..520896 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:515961..520896 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcagcagcagcagcagcagcaggagagcaggttcaagaggacctgcgtgttctgcggcagtagccagggcaacaagaccacctaccgcgatgccgccgtcgacctcgccaaagagctggtcgcgaggggcattgaccttgtgtacggcggcggcagcattggcctcatgggcctcgtctcccaggccgtctacgacggtggcagacatgtcattggggtcatccccaagactctcatgacccccgagataatcggagagacagtaggggaggtgaggccagtgtccgacatgcaccagaggaaggctgagatggcgaggcagtctgatgcattcatagccctgcccggaggatacggaacactggaagagctgcttgaagtcatcacatgggcgcaattaggcatccatcataaaccggttgggctgctgaacgttgatgggtactacaactccctgctcacattcatcgaccaagccgtggaagaaggcttcatcagccccagtgctcgccgcatcatcgtgtcggctccaacggcacaagaactcatggacaagcttgaggaatacgtcccttaccatgatagggttgcgtctgggctgaactgggagactggtcatctagggttctaa</cdnaseq>

Protein Sequence

<aaseq>MRQQQQQQQESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVAR GIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQR KAEMARQSDAFIALPGGYGTLEELLEVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQ AVEEGFISPSARRIIVSAPTAQELMDKLEEYVPYHDRVASGLNWETGHLGF</aaseq>

Gene Sequence

<dnaseqindica>82..204#1613..1710#2042..2072#3093..3192#3792..3862#4023..4166#4583..4651#aaacacaaagagagcaaaacttaagctagctctgggtgctgcattgtctgcagtttacaaaggtagatcaattagaggagaatgaggcagcagcagcagcagcagcaggagagcaggttcaagaggacctgcgtgttctgcggcagtagccagggcaacaagaccacctaccgcgatgccgccgtcgacctcgccaaagagctggtacacaactacactctctcatagcatgcatctatgtttaacagcatatcatgaatctctctctttagttttgtttagattgcggttcctttccataattacacctcaaagcaggaagcaaaggtttataattaattaatataggcgtggatctttaataaattgtgatcatatatatgcgctggcaaaacaggctatctttcacctgcatatatataatcacaatatatattgtgttatcaaaatcaaaattaaagatccacgcctgtgtagaggccgaattttatctattcattgtctaaaaagatactctccgtttcaggttataagatgttttgactttgatcaaagtcaaattgtttcaagtttgactaaagttatagacaaatatagtaatatttataatactaaattagtttcatcaaatcaataattgaatatatttttataacaaatttatcttggattgaaaatgttactactttttttatacaaacttgatcaaacttaatgcaattttactttgaccaaagtcaaaacgtcttataaccttaaacggagggagtatattgtactagttaactacaaactatcggttaccacttactaacggatactgtaacgggaacagctcaacatatcaacaaagttttaagagttggtaaaacttattcggtttcatccgtttttattcggttactgccaggtagtggtaaccccatccatattggataaggaaacctgcttccaatagatcgacacgataccctcgtccccttttctattcaattggactacatggctgctttacatccatcatcacttttttttttgaaaactactctatctgtcccataatataagaaattttaaagggatttgacatattcacaatggatctagataggctctatgtctagatttaccgtactagaatatgtcacaccctttcaaaatctcttatattataggacgggggagaagtatgcactactaatcaagagactatattgtggcaacgtgttcgaacaatatccagttcggtggtacagtaagaaacactacaatggtactggttgtattcgacagtgaaattcagacgtttatagtatttcgcgtgcctccctttgttttttttccttcatcgaaagaaaaaggaaacagagggacaggtctacgttctgttctgcaaaggagtactagtacgtatcaagacaagtacagcagcatgtacagagattttgtcatgtcagaaaatggcaacgcccatgcgttcctctgcatctcctgtctgcatgtgtatccccaagttttatgggaacaggagaacgctgccccattgttgcctctgcaacgaatttgctgctgcactgcacgatgatgatgaggagttgttgtttccgtgcaggtcgcgaggggcattgaccttgtgtacggcggcggcagcattggcctcatgggcctcgtctcccaggccgtctacgacggtggcagacatgtcattgggtacacactctcttcttcttcttcctctttccatctttaatttccctggcctctgaatttcaatccaccacgacagtcaagcttcaggttctatgttaaaggccactgatgttattgcgtcatgccatagcttctatgttaaaatactctacgcatgatattttgtcagtttagcttaggattgatgcacagttaattaattaagtctgattgaagagtatttttattatattactccctagtacgtccattaatattgatgcaagtatatgccagtacaaggaagtgctcactctgttgtttcatgctcttgtcttccatgcgcgtgcagggtcatccccaagactctcatgacccccgaggtatgaattgcacatctcccctactgctattctacttcacaagtgaaattattactgtaaattactatcatatactagttttagcaccaatcaccaccagtatatgctccttttaagtttcaatcatggcaatgcactgacacttgatagttttcaattgtgttactactaggccccagggctagttgacactctatcagatatatagcagtaatccttgagcacttgaatcgatcgagtgtctcctgggaaacagaacaggcactgcttagaaactgaaaacaacagtttaatctaatcacctggatgggatggagtatagtcgtacttttgtagtcgattgcgcgcctgcggcacaaatccaaacccgggcgtgagtataaactagaggagcactgcagctttgcagatgattcctcaaagacatgcttcccttggaagtcgaggcaacgtttgcctgtctctatagccttctcctcaaaagaatgttcttgtttgctactcctactacaactccatccatgaagttttagaagcaggaatgcaggcatgaggcatcctagatgaccttgattgatgaagcagagggcattgatctctgcagctacctgcatcagcccatcatgtattacttgatggctcatgcaacagctcaatcctgcttgcacatggttgttgcattgcagtaatttctcattgcacttgctcacagccatatgtactgtgaatctgtaatagagtacagtactgtttttccttcttgccacgtgcatgataggagtaatgtcaacggtaattaattggcatcaatgtgtacttccctggctcagcagtgtggtacgactaggagtttttgcctcagaatggtttagagacaatgcatgatgcatcatatatagtcatagcattgtaatatacttttagccacctgcaaaaatagttttagtagtagtgaattaaccagtaatctttaagtaatactgaaggggatatatggatgtatgttgttgttatctgcagataatcggagagacagtaggggaggtgaggccagtgtccgacatgcaccagaggaaggctgagatggcgaggcagtctgatgcattcatagccctgcccggtgagcgctgcatagccctgcatttcataactgtgcattgcattccatttctcaattttgtcaggtcaaggcgccagcaagatctccacggctagtactgcctcttaagagcaaggttaatagtagttgtaggcagccggcgttaattccatccaactcagctagtaactctttttgcaccttgtgaatacaataagtgacctgcaacgctgggcccatcaacttcacatcataataaaataacttaagcttcctctcacacatgcagctcacaacctttgcgctcaccacttttcaccatttttctctcgaagctggtgctagagccagcgataaaattgtcgcccactctcactctctctcctcttctcactcatccagctcaacactgtagctgacgtgtttctcctatcgccagtccagcttgtactgttgtactcgctctaataaatcctctagtaatagtactgcgtgtgtcagacaagtaataacacgccaagtggcaacgtggcacccttgtttacttacggtattagtattactgatcttctgtcgtttagagtaccacaaactaactagaatgtatcgaaacaattcaggaggatacggaacactggaagagctgcttgaagtcatcacatgggcgcaattaggcatccatcataaaccggtataattcagtgcattaatcgctatattatggagtatataagcactcgcttctctctgaaacgaactctttacgatattatccatttcatcttaattcagtgctaatgatttctgacagagagctttattcttttcctgatgaaccatgcatctttcaggttgggctgctgaacgttgatgggtactacaactccctgctcacattcatcgaccaagccgtggaagaaggcttcatcagccccagtgctcgccgcatcatcgtgtcggctccaacggcacaagaactcatggacaagcttgaggtagtctaaattaacagctcatgcaaagtttctttttttttttaactactccctccatcgcaaaatataatgtttataagttaatggtcttcaacgtaaaactttaactgttgctttcatccatgatatattatcgacaacaacaaaattaacataatatgaaaaatacttttttttcaagaatacgcataaggattacatatctttgtattaagattgaaaaaggaaaacgcttttaaatgcaaatttagtgatataactatgcgtggcactgaacatatacagtgttttggttttattactggtcacaaatttacaaaggttgaattttcttaaaacaaggatctccatctcaattatgacttgcttttaattgctctgtgcacaactgactgtatctcaatctatttatgcaggaatacgtcccttaccatgatagggttgcgtctgggctgaactgggagactggtcatctagggttctaagctgttgcagcgagcttaattaagcttaaatgaattgaagaaaggcgaaccatcgagcagccatcaacattaagcattgcttgttaattgtgctcgatctatgtagtagtagtagcagcttgttaaccagtctagattgtcttttttttttctcctacgaagcatggagtttgtcatctcagtttgggtaagaaaaactagtagcacctaatcagccatatatcgatgttcaagatccagtaactgagaattaattgacactaaaccaagtgtcaaagattgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0109300, RefSeq:Os03g0109300