Difference between revisions of "Os03g0166000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0166000| Description = Alba, DNA/RNA-binding protein family protein| Version = NM_001055607.1 GI:115450942 GeneID:4331735| Length = 3770 bp...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0166000|
 
GeneName = Os03g0166000|

Revision as of 19:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0166000

Description

Alba, DNA/RNA-binding protein family protein

Version

NM_001055607.1 GI:115450942 GeneID:4331735

Length

3770 bp

Definition

Oryza sativa Japonica Group Os03g0166000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3539932..3543701

Sequence Coding Region

3540194..3540330,3540836..3540916,3541030..3541263,3541342..3541448,3541548..3541622
,3541711..3541799,3541884..3541964,3543452..3543577

Expression

GEO Profiles:Os03g0166000

Genome Context

<gbrowseImage1> name=NC_008396:3539932..3543701 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3539932..3543701 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcggtaccagcgggtggagaagccgcggcccgaggccgccgtcatcagcgagaacgaaatccgcatcaccacccagggcctcatccgcaactacgtcacctacgccacctccctcctccaggaaaagcgcgtgaaagaaatagtgttgaaggctatgggacaggctatcagcaagacagtggctattgctgagatcataaagaaacggatccctgggttgcatcaagatacatcaattagttcagtcagtattactgatgtatgggaacccattgaggaaggccttgtaccattggagatgactcgtcatgtttcaatgatatcaatttccctgtcaccgaaggagcttaacaagagttcagctgggtatcaagctcccttgcatgcagagccaattaagccacaaagataccaacaaacccagcaatatcaacaacaacagcaccagtctaggccaagccaagttcaaacagattcatatgggcgcggccgtggtagaggcagaggaagaggaaggggttggggtggtaggggaggctatggtggagggtatggtggatatgataacaaccaaggaggttatggtggatatggacaccagggtggatatggacaccaaggggggtatggcaaccagggaggatatggccacaatcaaggtggttatggagggtatggttacaaccaaggtggatatggaggatatgaaaatggtggctggaactacaaccggaacagaggtggtggtggtggcgggggccgtggaagaggcaactggggatatggtggtccaggaggatatgaacgttcaggtccggcatatgaacgtggtggcagaggtggaggtagcccaggcggcagaggctatgcccggggccgtggacgaatgggcggtggccgtgggcgaggcaaccaaaactattag</cdnaseq>

Protein Sequence

<aaseq>MDRYQRVEKPRPEAAVISENEIRITTQGLIRNYVTYATSLLQEK RVKEIVLKAMGQAISKTVAIAEIIKKRIPGLHQDTSISSVSITDVWEPIEEGLVPLEM TRHVSMISISLSPKELNKSSAGYQAPLHAEPIKPQRYQQTQQYQQQQHQSRPSQVQTD SYGRGRGRGRGRGRGWGGRGGYGGGYGGYDNNQGGYGGYGHQGGYGHQGGYGNQGGYG HNQGGYGGYGYNQGGYGGYENGGWNYNRNRGGGGGGGRGRGNWGYGGPGGYERSGPAY ERGGRGGGSPGGRGYARGRGRMGGGRGRGNQNY</aaseq>

Gene Sequence

<dnaseqindica>3372..3508#2786..2866#2439..2672#2254..2360#2080..2154#1903..1991#1738..1818#125..250#tttctagggttttaagcctcacccaaaccgcctcagccgctcccctctccccttcgacaacagcagcgccgccgccgccgcaggagccgcatcgccgggggttcgccggagggagggagtagccatggatcggtaccagcgggtggagaagccgcggcccgaggccgccgtcatcagcgagaacgaaatccgcatcaccacccagggcctcatccgcaactacgtcacctacgccacctccctcctccaggtacagcgagccccctccccccagccgccgctcttcctgcttcgctcccgcgatgcccccctcttgcgggtgccccgcgcctagtagcgggttctccggttagatcttgctgtaccttgtaagaaaaaaaggtagtagtagtaatttttgggatgaggcgaatgcccgttggtgtggtgcactctacggcttggaatatatttggggaagcatgagttaggcgcgtgagtaagacgaggtgtggatttggtgcattgtgtgctgctgctgagttgctgattggaatcttggtgataagggttgtgttgagctcacaaagttcctgcctctgttagtttcgatgtgcaaaaacatgaaagatattaaagatgagttcttttttgttgcgtcaatgcctaaaggaacagcatatggggattatattggtgccgtgcaatgcattgtttttcaacagttaggtagcagggctgtgacctttgtactcacatagcaatgagtgatgagggagctgtttttctgcacggctatagtaggcacatgggatttctcttgctgtggcttgagttaaatttttgagatactcttgttattaatgtgccatgtgccaagtgccaattgacgacaagaactctctgatactaccgtttatgcatgcccgatttaagttgagcgcaatatacaagttttatgtttaatatgcaaactagcgcaacttttaatgcctctttaaagagctggttgttcctataattctgatattgaatatagtggattgtcacacgggtattatccttcaatcacgatttagtgccaaagtttagctctcatcgtaaaaaaaatgatttcctaattcagctcctgcacctgcgctccacaccgatttcaaattatagaagagcaaactaggaaacagttccctgtcctttctttctgcaggcacatcaaactgtatccctgctggccctttgccaccctgtgataagtgtatttgcattttgcccgattggatcctcctcttcaacccccagtctccaagttgactgttttgtttccttctcagccctatgcccatgctagctctattgctgtcaccgaggatctgctgcacgacgagactgatgtttgtggctgacataccttgaccaatgtatctcctgtttttatggactggggggttcacagcatttttattaaaatatgaatgcagaagatgcattcttgtaatccatatttctttttagcagtgtctatattcatcaggtagtccacatgattgttctatttataaccacttaaccagtacaaatctgagctgttatgtaacaactgctggaaatataacccattttgacaacattttgcagtatcactattcacttattttcgtgtgaagtgttatgccatttgtactgaggcatctaccaattgtcaccgtttatgtactctggtatgtgcatgctatgaatcttataacctgtttgtagcaggaaaagcgcgtgaaagaaatagtgttgaaggctatgggacaggctatcagcaagacagtggctattgctgagatcataaaggttagcctattgttatctctcttgctttaggtaccaatatttgaactgttgagcaattaactcacatctaactggcaactgcagaaacggatccctgggttgcatcaagatacatcaattagttcagtcagtattactgatgtatgggaacccattgaggaaggccttgtaccgttaagtttctgagaacaatttcatctgtcagtatattcttggactacactttttctttatgttatttattagtgttatcttgtgcagattggagatgactcgtcatgtttcaatgatatcaatttccctgtcaccgaaggagcttaacaagagttcagctgggtttgtttgatttgctcttatctcctcagtgttcaattcaaataatcacactaccatagttctgaatgaatgtagcaacattttatcgtccttttgaaggtatcaagctcccttgcatgcagagccaattaagccacaaagataccaacaaacccagcaatatcaacaacaacagcaccagtctaggccaagccaagttcaaacaggtgaatatcttttcactaatagaagtattttcgtaccattataagccggattgctaacttgttccttttgtattggagattcatatgggcgcggccgtggtagaggcagaggaagaggaaggggttggggtggtaggggaggctatggtggagggtatggtggatatgataacaaccaaggaggttatggtggatatggacaccagggtggatatggacaccaaggggggtatggcaaccagggaggatatggccacaatcaaggtggttatggagggtatggttacaaccaaggtggatatggaggatatggtaagtaatatgatgatatgctagaaatgtttattatgagataatctctcaatcaggaatttggtgtcctgaaattgtttgcaatcatttatagtaaccatttatcttttcagaaaatggtggctggaactacaaccggaacagaggtggtggtggtggcgggggccgtggaagaggcaactggggatatggtggtatgtactatttaataattgacaccttattttattcatgaccaagtaagctgttctgtgttcatgcctctcatatgtcagaggtactagtgttcttctgaactagctattatgttttacattgttttaatcggaatctgataattatttacatgctggtttactaagaataaagtcttcacaatttacttcttgtaccgtaagttcaaatccaccttcttggctcccatatatttgaacggagtaacaatttttaacacacgctgaacttaaaatagcaacagtgtctgtcatgtaacacaattacatgaaggtacttgaaatgagtggaaaatgatataatatgttgagccttttctaaattatccaggggcatttcatttccaaagttatctgctttaccttcactttagtggtatctgtttttgtttgtaccaaagaataggagacgtttcgtcatcttgcagcggcataaaacatccaattgtggaaactgttatttcaggtccaggaggatatgaacgttcaggtccggcatatgaacgtggtggcagaggtggaggtagcccaggcggcagaggctatgcccggggccgtggacgaatgggcggtggccgtgggcgaggcaaccaaaactattagatcgactttagttggatgtgccagcccggtcgttgggtgctgtatgaagaacaaaaactgtggatgcgttctccataggacggaaccctagctgtttctttgtgatcaatcgactagtcttcccagcttttcgctataatcatcaatggtgtctgccattgcttcgattctgtgggattttgacaagaatgttaagttttaccttggacatattttcctgtatttaagagtgcatttttgaatagcttgtctatcttcctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0166000, RefSeq:Os03g0166000