Difference between revisions of "Os03g0173900"

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(Created page with "{{JaponicaGene| GeneName = Os03g0173900| Description = Zinc finger, RING-type domain containing protein| Version = NM_001055658.1 GI:115451044 GeneID:4331787| Length = 526...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0173900|
 
GeneName = Os03g0173900|

Revision as of 19:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0173900

Description

Zinc finger, RING-type domain containing protein

Version

NM_001055658.1 GI:115451044 GeneID:4331787

Length

5265 bp

Definition

Oryza sativa Japonica Group Os03g0173900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3939377..3944641

Sequence Coding Region

3940459..3940599,3940952..3941186,3942175..3942215,3942650..3942694,3943668..3943795
,3943995..3944103,3944190..3944243

Expression

GEO Profiles:Os03g0173900

Genome Context

<gbrowseImage1> name=NC_008396:3939377..3944641 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3939377..3944641 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgggagtcggcagatggagctgcactacataaatactggatttccatacaccatcaccgagagcttcatggatttctttgagggcctcacatatgctcatgctgattttgctattgcagatgctttccatgatcaggctaatccatactgggcaatgatgcatacaaactcgtacaagtatggatattccggtgcaggaaattattacagttatgggcatgtttatgatatgaatgattacatgcatagggcagatggtggacgcagaatctgggataatgctacacctgtaaacaacactgaatccccaaatgtagtcttgcagggtggagaaactcctcatgcaaatacaagctctactactgaggaatgtatccaacaacaagtacaccagaattcgagcagtccacaggtcatttggcaagacaacattgatcctgacaatatgacatatgaggaattgttggatttgggtgaggcagttggaacccaaagccgtggtctctcccaagaacgcatttcattacttccagtcaccaagtacaaatgtggtttcttttcaaggaagaaaacacgccgtgaaaggtgtgtaatttgccaaatggagtacaggagagggaatctgcagatgacgcttccctgcaagcatgtgtaccatgccagctgtgtaacaagatggcttagcataaacaaggtttgccctgtttgctttgctgaggttcctggtgacgaacccaagaggcaatga</cdnaseq>

Protein Sequence

<aaseq>MNGSRQMELHYINTGFPYTITESFMDFFEGLTYAHADFAIADAF HDQANPYWAMMHTNSYKYGYSGAGNYYSYGHVYDMNDYMHRADGGRRIWDNATPVNNT ESPNVVLQGGETPHANTSSTTEECIQQQVHQNSSSPQVIWQDNIDPDNMTYEELLDLG EAVGTQSRGLSQERISLLPVTKYKCGFFSRKKTRRERCVICQMEYRRGNLQMTLPCKH VYHASCVTRWLSINKVCPVCFAEVPGDEPKRQ</aaseq>

Gene Sequence

<dnaseqindica>1083..1223#1576..1810#2799..2839#3274..3318#4292..4419#4619..4727#4814..4867#accgccaccttagccgcgcgaggcattgccctcctcctgcgcggccgccccccacgaccgcggcggaggctgctccggctggggcgggatcgacgacgactgattcggtgcgcgctcgcggtccccttttggatgagtggtgttgtgtgcgtgtgtcagtgtgtgtgtgtgtgtggcagtgttgagtgagcgtgggtggagtcgtcgcggatgaggtgatctgccgctgcattggctgttcggtcgatttttctttttggggtgttgtttttttcctttctcttctgctgcgccatttgggggcgtgggaatgggtgtctcgaggtaatttcaggtgccgagtttgcgaatgtgggtgatccggtgatgcatttgcgattccgtagagttcctctgggttttgctctagttgcttgttgagagtctgagtggcggcctaaatttctagaggtttttctatttggattggaactggaaaagaaaaattataatcgttgcttcgcagcgattctccttgttttgggcgtttgaagtagagacttcgattctcaacattgttttggactggatcgcgcattgattcgtgcaacgggttggtagttttgcgatgtgatgaaatattcgtcagtggcagttggggcgaaaggacttcttctgctagatcattttacggtaattttgattgtttggttgttatgatatcaatgcgaatttcacctctgcaagttgtgctgccaaagtaaccgtgcaataatgactgatctatgtcatttcacatttttggtaatgtgaaacgagaagatccgtagacttctagtactgttcaacatcttattgttcagtactttttgattcaatcggaataataaaatgcaaatataatcttatacaagaagacaaatccatgaatatatcattcatttcatcatgagctgacagcactagcctggggtgtttgagttgagttaacaaaagaaaaatgcaatgatttgtggattgccgacatttggggtaaacatttcttgtttctgattttctttttgtggcttgatttcttttaggttcatgatccatcagaaggaatgaacgggagtcggcagatggagctgcactacataaatactggatttccatacaccatcaccgagagcttcatggatttctttgagggcctcacatatgctcatgctgattttgctattgcagatgctttccatgatcaggtgccaattacagggctgtcattattcttaatagatcttatccaactactagtttattctaccacgatgtaccctttgtttatcttaagatgtatatttgccatggaatattaagtgacttgtgtcctgggtaatgtccctctttacatatctccagttgcattgcaaatcgtgtttgtttgtttcaaaattcttttggtgaatttcatgaaacctcactctccacataactcacaaaagcactcaagctaggatattaatcagaatgaatataatggtttcaatcataaccttaacctctgatccactatcattatccgtttatttactcttatttgctcataatgtgcaggctaatccatactgggcaatgatgcatacaaactcgtacaagtatggatattccggtgcaggaaattattacagttatgggcatgtttatgatatgaatgattacatgcatagggcagatggtggacgcagaatctgggataatgctacacctgtaaacaacactgaatccccaaatgtagtcttgcagggtggagaaactcctcatgcaaatacaagctctactactgaggaatgtaagtgcaagttcacaatccattatcacttctagtcattttaagtcataaaaaaggaacactggtaggcgtatcattttttttaatattcattaccaacacgaaatcagctacaggaccatctctggttagggtgctgagaatcaattacgacgtatttcaaatgagcaccttcaacttcttgtggtctacagtggaaaattattttggggtctgaaataattctacatgtttctccttttaatttccaataaactcaagtctgctcttgtcaagctgattcctctgatttcactggtttaattcatttggatatcttttagttgtaaagttgttcttctttgcaagtcgaaacacattcagttaatgcggctattcatgagttccagacttccagtgttttatagtatggttcgttacatctaaatcaaatcataaaatattactcttgttagcatttccttactaagaggacaacaaacacatacacatactcatggttctacaataatgaagaaaaggcgacctttctgttgatggaagcaatggcatcatttctacctttgctcacttactgtcatatggcaagaaatatttatttgtgtatgattgtgttcagcattgtataactgaaaattttgttttaacatggtaacacctaagtagatgctcactaaaaaggataagtgatgagtttcttaatgcttttgccatcgttttttttttttgctcctcaagtgttattgacttgtttcattgtacacccatgagttgttctaacagcttggttatgataccgaaagattattttggcaagcatacacgtgaaataagtcctaagaactgtctatgttatgtgttaaaactgtatgcatttacctggaacttgaattgtaactgaacctttatagaatttgcaccttgtctttcaagtcaagtaactgaattgaactttattttggctcactgattttgctttcacttgcaggtatccaacaacaagtacaccagaattcgagcagtccacaggtacatgagtatttcaagcatgtttatcttttcctaacttttattttccatgcaaatgcatttttccacttatgatttcaggctttacgtgcaaaatgccttttacatggttccacctatcttaacgattccaagtcaaatgattttatttctttgactatattatatgccataaaaatttagctaataaaattatttgtttttcacctatcaatttgcatccacattctatatgctatagaattgtattcttttgttgcatgtataagatgcaaacttttgatctcattcatccagagggtgatgagatatgatcgctgtaatttttagcatgtgttatgtgatgtcacttacctgctgtgtgttgatatttgttctgggctcatgcctccaatcaaatcactgaaaatcattactgttgttaatatttgcaggtcatttggcaagacaacattgatcctgacaatatgacatatgaggttaatgacttaagcttgcatcatcttctgtcatcatgttctcattcaggctttttcatgtaacatcaacacttcaaacatgcatcttcttactttttcatacgatctacacgcacaacttgggctagattggtaaaagactgcagagattataccatgcattttgtttggtcaatgtgtatgattttcatttggatgctaagatacctattaaaatggacgctgtgaaaaactgtgatacatactaatttcaatttgcactatcagtaatctattgtcctttcctaactgcaaaacattaattactttttctttgtgtggcctcacttggggcacttggcacaaaaggttaactgtctctgaggccacatattagctgtttcttgaagtcacctgattataaaactcagtgtcacaggtggtaaccatttggactgattgatcctatgtttggtttgtgaacaaatgttcttcgtgagagttttttgtcttgtcgaatatatgattcatgactaaaaatgaactccccttatctatgacgatcgttgctgatttcttcctttgtaactcaagataagagtgctataagcattgtcattttcacagctagatgtcatgtaaggcaaatcataaaataaatgtagaagagtcaaatcagccagaatggcaattcttcttgtctcctctagatctatggacttagttgcatatcttgtttgatgaagacattgttgttaattgaatgatcaattgctggtcttttttaatattatctgagagtacttcttggttcctgcttgtcacagattgccctttctgagactagtaatgcttcgatgtttaaattgtattttcactgatcattgtttaggaaaagtatctcattcatttcatctagaggtggaatcctgtatgttcctttcttatctgattatccttggttcttggtatactaaatgccttttcttggcaggaattgttggatttgggtgaggcagttggaacccaaagccgtggtctctcccaagaacgcatttcattacttccagtcaccaagtacaaatgtggtttcttttcaaggaagaaaacacgccgtgaaaggttagatcttgataaaatatttatgtacctctttttgtctatttaattgtctttacccctagaagcatgtagaattacttctaagttctgtcttcatgaataatgttatggtactgcatctttggcgtggagcatggaactggttcaacgaagtaatacatgtgaagttaacttgtgggacttcctttttcggtaacaggtgtgtaatttgccaaatggagtacaggagagggaatctgcagatgacgcttccctgcaagcatgtgtaccatgccagctgtgtaacaagatggcttagcataaacaaggtcagcagtctgggactgaaacgtgcatatcttctcatttcaccacctgcttctttcgcttaatggaatataaattacttctgtaggtttgccctgtttgctttgctgaggttcctggtgacgaacccaagaggcaatgagtcaaggccgccaaaatgttcttgcgcccagactcagcccacactgtaccccaacggatgcatgatttctgcttgaaggcagctttcccctttctctctagatttgtgtattagaatcatatcgcaaatataggttataaccagatgtagttggatcttggaacctgttctgagaggtttgccgtagactgtagagttcgaatgtgaagtgtaaccctgtgctagatgaagcatgctggatcacgcgcgcttgcgaggtgtttttgtccactgcaaagagcattgcactagcctgtgttatttgaattcaattaagattttgtggacagaaaaaattcatttgttacatcccctgcttttagcctgtcaatcacagtatgtcccctgtttttcccatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0173900, RefSeq:Os03g0173900