Difference between revisions of "Os03g0195300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0195300| Description = Similar to Low affinity sulphate transporter 3| Version = NM_001055792.1 GI:115451312 GeneID:4331932| Length = 4582 ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0195300|
 
GeneName = Os03g0195300|

Revision as of 19:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0195300

Description

Similar to Low affinity sulphate transporter 3

Version

NM_001055792.1 GI:115451312 GeneID:4331932

Length

4582 bp

Definition

Oryza sativa Japonica Group Os03g0195300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4973696..4978277

Sequence Coding Region

4974061..4974216,4974349..4974425,4974509..4974570,4974663..4974856,4974991..4975277
,4975358..4975484,4976054..4976284,4976388..4976453,4977048..4977222
,4977299..4977506,4977583..4977631,4977854..4978192

Expression

GEO Profiles:Os03g0195300

Genome Context

<gbrowseImage1> name=NC_008396:4973696..4978277 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4973696..4978277 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaatttcagccatttcctcagggagttcacccaaacacttcagaaccagccatggagcccatggcaagtgagtcatctgtgcccatagggacagcttttgcagacttgctgctgcaagggccagagcacccaagcctgtggaatgatctcaccggcatgttcaggaaggcattccgttggcaaggtgcagacaagcgcttcacactgtctgtgtatgtgatgtctgttctacagggtctgtttccaatacttgactggtggaaaacctacaatctgaaattctttcgaagtgacctcatggctggcctaactcttgcaagccttagcattccacagagcattggatatgcaactctggcaaaactggatcctcagtatggtctttatacaagtgttgtgccacctcttgtatatgctgtgacggggtcctctagggagatagccattggaccagttgccattgtgtcattattgctttcatcaatgattcagaagatagttgacccatctgttgatccagcgttctaccgaaaaatggtctttaccgtgacattccttactggtgtctttcagtttgcatttggtctgttcagactgggatttcttgtggattttctatcacatgctgctatcgtcgggttcatgggaggagctgctattgtgattggattacagcagctgaaggggctgcttggacttagtcattttacaaatagaactgatgtcgtctctgtcaccaaggcagtctgggtttcagttcacgaaacatggcatccggagaacgtcttcattggatgttcctttttcatgttcattcttgccatgagattcattggaaggaagtacaagaaactcttttgggtctctgccattgcacctgtactatcagttgcactatctactctgtttgtctatgcgacaagagcggataagcacggcgtgaagattatacaaaaagtgaattcaggtattaatgcaagttctgtcgagcagatagatctcaaaggaggctatgctgccgaatgtgcaaagattgctcttgtttgtgctgtgattgctctgacggaagctgttgctgttggccgctctttttcagcgatcaatggatatcggttggacggaaataaggaaatggtagcaatgggcttcatgaatatagcaggatccttatcatcatgctatgtagcaacaggttcattctcgcgcacagctgtgaacttcgctgctggttgcaagacaaccgtttcaaacattatcatggctgccactgtgatggttgccttggagcttctcacaaagctcctgtactacacacctgtgtccatccttgcatcaatcattctgtcagctcttccaggattgatcaatgtgcaggaagtctgcttcctgtggaaagtcgacaagatggacttcctcacatgcatgggatcattccttggtgttctattcggatcagtggagattggtctttcagttgcacttcttgtttcctttgcaaagatcattatacagtcgatttggcctcaagtagagattcttgggaggcttcagggcacagaaatcttctgtaacgtcaagcagtatccagtggttcacgaaacaccgactgtactgaccgtacgcattgaaacatcattcctttgcttcgtcaactccagttccatcaaagaaaagatcatgggatgggtaaccgatgagcgcgaggcattttgctcggtcgttcttgacatgtcaaatgtggtaaacatggatacttcaggtcttgtggcgctggaagaactgcacaaggagctggcgtgtctcggcatccagatggctatagccaagcctggatggcaggtgatccacaagatgaaactggcacggctcgtcgacggaatcggagaaggatggttcttcctcacggtgggcgaagccgtggaagcttgcctggcaaacaaggcgggaaacgccctggaatgctgctga</cdnaseq>

Protein Sequence

<aaseq>MEFQPFPQGVHPNTSEPAMEPMASESSVPIGTAFADLLLQGPEH PSLWNDLTGMFRKAFRWQGADKRFTLSVYVMSVLQGLFPILDWWKTYNLKFFRSDLMA GLTLASLSIPQSIGYATLAKLDPQYGLYTSVVPPLVYAVTGSSREIAIGPVAIVSLLL SSMIQKIVDPSVDPAFYRKMVFTVTFLTGVFQFAFGLFRLGFLVDFLSHAAIVGFMGG AAIVIGLQQLKGLLGLSHFTNRTDVVSVTKAVWVSVHETWHPENVFIGCSFFMFILAM RFIGRKYKKLFWVSAIAPVLSVALSTLFVYATRADKHGVKIIQKVNSGINASSVEQID LKGGYAAECAKIALVCAVIALTEAVAVGRSFSAINGYRLDGNKEMVAMGFMNIAGSLS SCYVATGSFSRTAVNFAAGCKTTVSNIIMAATVMVALELLTKLLYYTPVSILASIILS ALPGLINVQEVCFLWKVDKMDFLTCMGSFLGVLFGSVEIGLSVALLVSFAKIIIQSIW PQVEILGRLQGTEIFCNVKQYPVVHETPTVLTVRIETSFLCFVNSSSIKEKIMGWVTD EREAFCSVVLDMSNVVNMDTSGLVALEELHKELACLGIQMAIAKPGWQVIHKMKLARL VDGIGEGWFFLTVGEAVEACLANKAGNALECC</aaseq>

Gene Sequence

<dnaseqindica>4062..4217#3853..3929#3708..3769#3422..3615#3001..3287#2794..2920#1994..2224#1825..1890#1056..1230#772..979#647..695#86..424#aatcaaattcacctgaagcacctaaggttcacatggacttgccatcctcacagctcaccaatcttggaggcaccgatacattgtgatggaatttcagccatttcctcagggagttcacccaaacacttcagaaccagccatggagcccatggcaagtgagtcatctgtgcccatagggacagcttttgcagacttgctgctgcaagggccagagcacccaagcctgtggaatgatctcaccggcatgttcaggaaggcattccgttggcaaggtgcagacaagcgcttcacactgtctgtgtatgtgatgtctgttctacagggtctgtttccaatacttgactggtggaaaacctacaatctgaaattctttcgaagtgacctcatggctggcctaactcttgcaagccttagcattccacaggtaattgtttgttttttgagatgactggaactattgttatcatatatgcacaaattgtgtatgaatcttgtctgaatcgagcaaactcctgggatttctctatcaattccttgatgcatttcctcaagtcgtcagtagtgactgacttctttacttagaaggttggaattcgcctagattattcagatatttctgacttgttttattgtcctgttattatagagcattggatatgcaactctggcaaaactggatcctcagtatggtctttgtaagtcattgcagatttaacttggttttatgtgttctaaatgttcttttgacatatggttttattttgtggtaagatacaagtgttgtgccacctcttgtatatgctgtgacggggtcctctagggagatagccattggaccagttgccattgtgtcattattgctttcatcaatgattcagaagatagttgacccatctgttgatccagcgttctaccgaaaaatggtctttaccgtgacattccttactggtgtctttcagtttgcatttggtctgttcaggtagtgtctctgccgtcttttgatcaaaatgcgcttacttacattccctaactgacttttgcattgattcttgtagactgggatttcttgtggattttctatcacatgctgctatcgtcgggttcatgggaggagctgctattgtgattggattacagcagctgaaggggctgcttggacttagtcattttacaaatagaactgatgtcgtctctgtcaccaaggcagtctgggtttcagttcacgaaacagtaagtatttgcccttatattcaatctgaacctgtgcatgcgcaggcatatgcctggaagttatgataacacataatatgatcactaaaacaaaatattaaaattataagctttaacacatatgaaattaactagtccaaagtatcaagccaaaaaataggtacaagttcccttcgacacaaaaagagataaagctgtatgaatgaaattagctactcaattcagcatgcatgacaacagcaaaaaaactgctagctcatcagtatagttcttagtatttcttactacttaatagtatgagctaattgcttcttcagttgctgaggttttcagtaatcatgaggagagaagtgctgatgcatgcataaaactacaattctttagacatatacttagccagtacacttactatagccttgcaaatttattctctacagattttgtaacaaagcaatcatgagtatatactatatataagtaattgtaactttagttctcacttgtcaggatgttacctaagcgtgcttttgccccattaatccttatatttgagctgcctttgtatgcaattttatatctggcatgtaacgacagtggcatccggagaacgtcttcattggatgttcctttttcatgttcattcttgccatgagattcattgtaagatctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcgatcttgatcttgatcttggagaacgaatactttcagggaaggaagtacaagaaactcttttgggtctctgccattgcacctgtactatcagttgcactatctactctgtttgtctatgcgacaagagcggataagcacggcgtgaagattatacaaaaagtgaattcaggtattaatgcaagttctgtcgagcagatagatctcaaaggaggctatgctgccgaatgtgcaaagattgctcttgtttgtgctgtgattgctctgacggtacgtgtttacccttcaaagatagtcctgcactcctgctcctctccctgtaaaacgagaagaagaagaagataatcctgttgtttcttcattcttataatttattaggccttttgtacaaattagactcaggttgttgtatcaaaactttgcttccttgctaaaaataatgcacttcaaaagaaataatgtgacttactcctatactcctagtgctgcagcgtatttgtcaagagagtagtgcgtatatacttttacaaacagaaacgtgtgcggcctaaaatctcatcaggcattaattagagaaaattgactcctccactatttttattttatataaagctatgaagtgaactactcattttaaacaaaaaaaagtgagtaggcataagcttaaatgaacttctgcagaaattattaaaagtataaataagtctagcctaaaggagtattcagagttcagacagctattagtagaaactcactaagcatttcagaatcactcaataggaggtccatatgaaaactgagtttcagaaaactattctggtctgtgttgtttatgacaggaagctgttgctgttggccgctctttttcagcgatcaatggatatcggttggacggaaataaggaaatggtagcaatgggcttcatgaatatagcaggatccttatcatcatgctatgtagcaacaggtgaataaaaaatctgcagatcgtatgtacattcctagattcgttcaaccatcaaactttactttggtaattatctgcaggttcattctcgcgcacagctgtgaacttcgctgctggttgcaagacaaccgtttcaaacattatcatggctgccactgtgatggttgccttggagcttctcacaaagctcctgtactacacacctgtgtccatccttgcatcaatcattctgtcagctcttccaggattgatcaatgtgcaggaagtctgcttcctgtggaaagtcgacaagatggacttcctcacatgcatgggatcattccttggtgttctattcggatcagtggagattggtctttcagttgcagtactgatccctcatttgatctgaagtttactactgtattttttttttcattttgattcatcagaagtatgttgaagtttcatttcttgcatgcatgcttatgcaattctgatttggtggagctcttcttgcagcttcttgtttcctttgcaaagatcattatacagtcgatttggcctcaagtagagattcttgggaggcttcagggcacagaaatcttctgtaacgtcaagcagtatccagtggttcacgaaacaccgactgtactgaccgtacgcattgaaacatcattcctttgcttcgtcaactccagttccatcaaagaaaagtacagacactaatcacaagcaattgggatcacaaaagggaatacctgaatgctggatgactcggtattaattcacttttccctgtttccaggatcatgggatgggtaaccgatgagcgcgaggcattttgctcggtcgttcttgacatgtcaagtatatgaaatttacacaagttggctattgtcagagtgatctctacctagcattatcctgacatgtgagttcctatcttgcagatgtggtaaacatggatacttcaggtcttgtggcgctggaagaactgcacaaggagctggcgtgtctcggcatccaggtgagcgttaccaacatgctcaggtttccaacatatgtatagagtttgcactgcatattttcctccgaaaagctggccgatgctgtggtgaaatgctctcgcccttgtcctgaaaaacaaccccacttgcagatggctatagccaagcctggatggcaggtgatccacaagatgaaactggcacggctcgtcgacggaatcggagaaggatggttcttcctcacggtgggcgaagccgtggaagcttgcctggcaaacaaggcgggaaacgccctggaatgctgctgaatcgaatccaccgtgtgcatggtctctccggtggttgaataaagagagacactagtgcttcgtggtacgctacaaaaggattgtgttgtgtgctagtgctgcacgatgatgcagcttcagctgtagtgtggtgcttcatggattgtgcgacgtgcaactgttgggggaagacgaactgtgtctgtctgaacttagtatgccgagttcgtctaaattccccactatagctgtaggtttgtgatgtatcggatgcatttgtgaagagcaaatgccaggttttaagtgttggaactgatgattgtgtaatattattatattaatcgagtttgtataattaatttgtactcgagtttgtgcgttttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0195300, RefSeq:Os03g0195300