Difference between revisions of "Os06g0643300"

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The combination of RISBZ1 and RPBF play critical roles in global processes, including SSP gene expression, during seed development.
 
 
 
==Annotated Information==
 
==Annotated Information==
 
===Function===
 
===Function===

Revision as of 09:24, 10 June 2014

The combination of RISBZ1 and RPBF play critical roles in global processes, including SSP gene expression, during seed development.

Annotated Information

Function

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Expression

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Evolution

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Labs working on this gene

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References

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Structured Information

Gene Name

Os06g0643300

Description

Development protein-like protein

Version

NM_001064712.1 GI:115469155 GeneID:4341638

Length

3154 bp

Definition

Oryza sativa Japonica Group Os06g0643300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27092503..27095656

Sequence Coding Region

27092681..27093298

Expression

GEO Profiles:Os06g0643300

Genome Context

<gbrowseImage1> name=NC_008399:27092503..27095656 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27092503..27095656 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaacccggagaagctgatgacccagatcttcgacctcaagttcacctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagctcaaggtgaagaaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgagaacgccatccgcaagcgcaccgagcacatgaactacctccgcctcgcctcccgcctcgacgccgtcgtcgcgcgcctcgacacccaggcgaagatgcaggtcatcggcaagtccatggccaacatcgtcaagtcgctcgactccgcgctcgccacggggaacctgcagaagatgtccgagaccatggacaacttcgagcgccagttcgtcaacatggaggtccaggccgagttcatggagggcgccatggccggctccacctcgctctccacgcccgagaccgaggtcaacagcctcatgcagcaagtcgccgacgactacggccttgaggtctccgttgggttgccgcaggccgccgctcacgccataccagctgccaaggagaaggagaaggctgttgatgaagacgacctctcccgccgcctggctgagcttaaggcccgcggctga</cdnaseq>

Protein Sequence

<aaseq>MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIE KGNMDGARIYAENAIRKRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSL DSALATGNLQKMSETMDNFERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVA DDYGLEVSVGLPQAAAHAIPAAKEKEKAVDEDDLSRRLAELKARG</aaseq>

Gene Sequence

<dnaseqindica>179..796#gaatcaaatcaaacggaaccgaatcccatctccccaataataaaaatccccaattcgcgtctcgtctcctcgcaaatacgacgcgttcccaaatcccccaatccgatctgcctttcctcttcctcctcgtcaaaccctagccaaatccacgatcggggctagctcgtcggcggcggcgatggggaacccggagaagctgatgacccagatcttcgacctcaagttcacctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagctcaaggtgaagaaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgagaacgccatccgcaagcgcaccgagcacatgaactacctccgcctcgcctcccgcctcgacgccgtcgtcgcgcgcctcgacacccaggcgaagatgcaggtcatcggcaagtccatggccaacatcgtcaagtcgctcgactccgcgctcgccacggggaacctgcagaagatgtccgagaccatggacaacttcgagcgccagttcgtcaacatggaggtccaggccgagttcatggagggcgccatggccggctccacctcgctctccacgcccgagaccgaggtcaacagcctcatgcagcaagtcgccgacgactacggccttgaggtctccgttgggttgccgcaggccgccgctcacgccataccagctgccaaggagaaggagaaggctgttgatgaagacgacctctcccgccgcctggctgagcttaaggcccgcggctgagggatttcacttcaggtgataaacatagccacccctagcatcatacatgaatacttaccttctgttgcacttgtgaaatattgttttagtttttatcaatttgatggagaatgtgaaggtggttatgtggtgtgtatctagtatctacaagaccacgctgtttccttgagttatactcctactttggcctttctgaatgcagctgcgcaccgaaaaataatggctatgctgctatggtttaagatttgtggaaacataagactaaccatacctcacatcttacctgtcaaatggcgagggttactgaggtgttgcatattcatgtcatgctccctgtgctgaagacatcgtcattgcataacatggatgccaataaaacaatgagtcatgctgttatcactgacctaacaatcaggccattcggctacctgggctgtggctgcggctgctgctgcccgctgtttccttgctgcttgcagcactgttgctgttgtctgtggcgcagatgcagcccaggcagccaaacagccttaatttcaccaatggaaatttctgtgtattccaatatcaaatagcatcatacatgcggcaaatcatctcttctgttggctgattacttgggaggtatgtagtgttgtgaattgtgataggacataaaatgactttcaggatttttaacagctaacatgcggtagtcctatattatgacttactacggaattgatattttgataatgatttactcttcttgtactacctaaaaagtgaggaggatagcaaataacaaggataatattattctgctttaacttaggagcacccttaacagcatgtatgaagtgagaccagtgatcattggtgtgctcagatgatatcatgataacacctattcattttgtgtaaattgtattgttttacctgctgaaacataaaagttgtctttttactcttgaatgttcagcatgttttggatgtaaaattatgtttaaactctctgggctagctattagattaaaaggtttttggtgtttttatgttgccttctcaattgtatatttgacagttaaatcagtacgcaagcagttttctgcaccttacatgccaggaagccactcacagaatattggtagtacaaaatgtttatttaatcctactatcagtttgtttatttaatcctactcacagaatgttcatttgttaatgtaagtagcacaagctcttcaccgaatatataaagtaacatttttcatgatgtattttttatgttgagttcctcagtgatgaaatctcatctccatttatttgtaatttgattactattgttacccttgtttgtgttgaaagggctggctttcataacatcctgctgtggtgccctttgtagttgtgtcgaccttccctttatgtgaaacaccacccccttagtgctacatcttggagtgactgcattttctggtgattttacttccaaacaccatataaggctcaacccaaccacaccaaaatattggtaatggcaaagcttttataggctcatttggtctgttgcaaaaattcacaatgccaatactttgggaaggctagacaaaaggttaaagtatctttgccaaaaaaaatttggcatcaaaccatcttaccaaaattttgacaaggaggttaacaatggctacaagccctaacacttggacgaacgttactaaaactttgttgcatttatcaggacatagtgaactttgttgcatttatcgagacagtgtgtatagagtgacttgcacgcataccttttctctatgcgatgcagtctttcaaggccaatttgtattttcatgcaaaatcatagaagggtatacaaatgtcttcaaactttactgtatcgcattttcacatgcttgctaacttaaagcgtaaatgcacgccacaaatttgagttcactaaatgcattctttaatgcatgcatattacatattcactgcactttccatatatgggaaatggcctatgcctatatgcattgattcattaaacctttttccccgttaactaacttccaccgtatctcattttgcagatatgattctcaagctgctatgagccattgtcacgtcaaaggctactcatatttgttagattcgtaaatactgttatgctaaaatgcgtgtgttgatatcccatatgggatctgtggacttcattaaaaccttgctgtgtgatacaaatccataatatgtgagcttgagaacgtctctgtgtcgctgtatcctaagcctgcccgtttgaacagaaatgttgaagttgtccatcttttcacgggatgttttccttgctttaatgccatgaacaaattcggtagccgcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0643300, RefSeq:Os06g0643300