Difference between revisions of "Os03g0212700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0212700| Description = Similar to Cytochrome C reductase-processing peptidase subunit I, MPP subunit I, P55| Version = NM_001055892.1 GI:115...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0212700|
 
GeneName = Os03g0212700|

Revision as of 19:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0212700

Description

Similar to Cytochrome C reductase-processing peptidase subunit I, MPP subunit I, P55

Version

NM_001055892.1 GI:115451512 GeneID:4332040

Length

4656 bp

Definition

Oryza sativa Japonica Group Os03g0212700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5897492..5902147

Sequence Coding Region

5897655..5898332,5898842..5899006,5899131..5899268,5899338..5899489,5899596..5899704
,5900393..5900491,5900581..5900646,5900733..5900840,5901662..5901748

Expression

GEO Profiles:Os03g0212700

Genome Context

<gbrowseImage1> name=NC_008396:5897492..5902147 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5897492..5902147 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttccgccgcctcctctccgccgcagtgcgccgtcgctccgccgccgcggcggcggcggcggggcccgggaatgcgcgcgaggcatccaccgcggtcgccgccgcggggcccggcgtcatcgcccccgacgcggccccggtccgccccccgatgatggtgtacgaccgcatcgccgaggccgtcaacgccaggctccgtcggctcgagcacccggacccccgcttcctccgctacgcgagcccagtccccgcccacgccgaccacaccgccatcctcgccgcgccggagacccgcgtcacgacgctccccaacgggctccgcgtcgccacggagtcctcgctcgcctcgcgcaccgccaccgtcggcgtgtggatcgacgccgggagcaggtacgagacggaggactcggccggggtcgcgcatttcgtcgagcacatgctgttcaagggcacgggtgaccgcaacgccgcgcagctcgaggaggagatcgagaacatcggcggccacctcaacgcatacacgtcgcgggagcagacgacctactatgccaaagtactcgacaaggatgtgccgcgtgcacttaatattcttgcggacattctgcagcactcaaagttggaagagtcccgcattgaacgtgagcgcgatgttattctgcgagagatggaagaggttgagggacaatatgaggaagttatattcgatcatctccatgcaactgcattccagtacacttctcttggcagaccaatcttgggttctgcagaaaatgtcaagtcaattacccaagaggacctccagaagtatattgaaacacattatacggctcctagaatggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaactgtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagcctgctttactggttctgaggtccgcatcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatggatagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaagagtgctggaggagggaaacacatgggttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcatttaatacaaattacaaggacactggcctctttggtgtctacgctgttgctaagcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcataccgggttactgaggaagatgttatccgtgcacgtaatcagctgaaatcttccatccaactgcacctcgatggttccactgctgttgttgaggatattggccgtcagttactcatctatggtcgaagaattcctattcctgagctttttgcaagaatagatgcagttgacgcaagcacagtcaagcgagtggccaaccgtttcatttttgaccaggatatcgctattgctgcaatgggacccattcagggtcttccggactacaactggttcaggcgccggacctacatgctccgttactag</cdnaseq>

Protein Sequence

<aaseq>MAFRRLLSAAVRRRSAAAAAAAGPGNAREASTAVAAAGPGVIAP DAAPVRPPMMVYDRIAEAVNARLRRLEHPDPRFLRYASPVPAHADHTAILAAPETRVT TLPNGLRVATESSLASRTATVGVWIDAGSRYETEDSAGVAHFVEHMLFKGTGDRNAAQ LEEEIENIGGHLNAYTSREQTTYYAKVLDKDVPRALNILADILQHSKLEESRIERERD VILREMEEVEGQYEEVIFDHLHATAFQYTSLGRPILGSAENVKSITQEDLQKYIETHY TAPRMVITAAGAVKHDDIVEMATKLFNDLPTDPTTTSMLVSTQPACFTGSEVRIIDDD MPLAQFAVAFNGASWIDPDSIALMVMQSMLGSWNKSAGGGKHMGSELVQRVAINDIAE SIMAFNTNYKDTGLFGVYAVAKPDCLDDLAFAIMQEISKLSYRVTEEDVIRARNQLKS SIQLHLDGSTAVVEDIGRQLLIYGRRIPIPELFARIDAVDASTVKRVANRFIFDQDIA IAAMGPIQGLPDYNWFRRRTYMLRY</aaseq>

Gene Sequence

<dnaseqindica>164..841#1351..1515#1640..1777#1847..1998#2105..2213#2902..3000#3090..3155#3242..3349#4171..4257#acgcgacaacgccctctctctctctctctctctctctctctctatttctccccatctccccgatccacccgtctctctccaaaccctagccgagctagatctccacctccgccgccgccgccgccgcctccggcgaggccccaccgccacagatccccccgcgatggcgttccgccgcctcctctccgccgcagtgcgccgtcgctccgccgccgcggcggcggcggcggggcccgggaatgcgcgcgaggcatccaccgcggtcgccgccgcggggcccggcgtcatcgcccccgacgcggccccggtccgccccccgatgatggtgtacgaccgcatcgccgaggccgtcaacgccaggctccgtcggctcgagcacccggacccccgcttcctccgctacgcgagcccagtccccgcccacgccgaccacaccgccatcctcgccgcgccggagacccgcgtcacgacgctccccaacgggctccgcgtcgccacggagtcctcgctcgcctcgcgcaccgccaccgtcggcgtgtggatcgacgccgggagcaggtacgagacggaggactcggccggggtcgcgcatttcgtcgagcacatgctgttcaagggcacgggtgaccgcaacgccgcgcagctcgaggaggagatcgagaacatcggcggccacctcaacgcatacacgtcgcgggagcagacgacctactatgccaaagtactcgacaaggatgtgccgcgtgcacttaatattcttgcggacattctgcagcactcaaagttggaagagtcccgcattgaacgtgagcgcgatgttattctgcgagagatggaagaggtttgcttccttatgcttagatgtgaacatcccttaattaatcatcttcattgtgatggtggctgatttatgttactagttgttggcgttctggtgtagattatatatgcattatatattacctttaggcccatgataaattagataagctgcattcaaatgcaaattcaacacgacagatgctggatggaaataacttcaccttatcctgttgtgttatgggtatttttatatgatgcgaaatcttctaaatcttccttttggattaagtacatttatgttagacatatagacatactaattttgaagcgttgcggttgttcacatgaattttttctatagattgtttcttttgctttatttatcctaattgtggaaaccaatatttatctaatcctttgattgactagctaaggcacactgtgtcataattcactagctaaggccttttttttttttctgtttgaggggcatcggcataacttctgactgttgctatcttatattaggttgagggacaatatgaggaagttatattcgatcatctccatgcaactgcattccagtacacttctcttggcagaccaatcttgggttctgcagaaaatgtcaagtcaattacccaagaggacctccagaagtatattgaaacacattatacggctcctagaatggtacatgataatgaatttattgaatttttttattcacagatttattgttttatagtacctctattgctgcagttggatggaccattttcactagtaaatatcatacgcttctatatgttttcaggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaactgtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagcctgctttactggttctgaggtgtgtttgacgcttacctgcactatctattgttaatatggcttgatctcagtttatgctactcaataggtccgcatcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatggatagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaagagtgctggaggagggaaacacatggggtatttttttctttctctagctcttggtgtttttatcagtgtttctatatggaccaaattttgttttgttctactgactgatgatcatcctacataacttttacagttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcatttaatacaaattacaaggacactggcctctttggtgtctacgctgttgctaaggtaagtcttgcttgaatgtctatttatcaaggaaaagtttatattaagtgctcgaactggtcttttattcttatatgtttttcatagtgatgtatgtctgaagtgcaaatccttggtcatgcaatccttcctatccatggttaccataataataattgtccgaacccctcaaatgttatggttagagtaattgaacaaaaattcaggcctaaagagctctgtattactgatctgtggaagtggtgatggtgttcctgttccaattcttgcttctgctttttcgtcgaatgaagtgttaaacttgattacttggcacagatatactcatgggttgcttagatgaagtggatgtttttgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgcattgtggggttattcttcccctactttggctagcaagtttgaaatatcttggcaaacttggtagtctagcgcaatatgcaaaattttcctctgtcggacatgagcatggtacatacacgatattgctcttcttttttcttgggtccacttgatttgtctgttcgattttatagcactttgttgatcgagggcttctcgaaatgcacagtagtattgtgataatattgttgctagtgttcacaccctccttttttatgatggttttgtatcacctattttgcagcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcataccgggttactgaggaagatgttatccgtgcacgtaatcaggtatctctttgaattactactgatttgggccacaatatagtactatgcacttcagcttcacattctcattactttggtctgacttccagctgaaatcttccatccaactgcacctcgatggttccactgctgttgttgaggatattggccgtcaggtattaccaggttttagctatgtgatgtcacatcacattcttgattaatgccatccacactagcttatttttttcttttttctcagttactcatctatggtcgaagaattcctattcctgagctttttgcaagaatagatgcagttgacgcaagcacagtcaagcgagtggccaaccgtttcatttttgaccaggtaattgttattttgccagcatacagatatggcatgtagaatatttgattttctgtactactttaaatgatataatggtggtgtccaagtctgcctccaacgccgggccataaggtccccacacgaccacacgtgcttttgctttagatatggcattatatgcctaatcaactaactatgctgtaacctatatttttttgcttttgctatactactttaaatgatgctagtggtgctgtccgagtctatctccaatgccacaagctgacatgtggggccataaggtccccacacgaccacacgtgaatatgcttttgctttcgatatggcacttttatatgcctaactatgctataaactgtattttttttgcttttgcttttatctcttataatatcagttgcaatgcatggtcctttagctagtttttcatagtattaatatgctgaacctaccaaattttagtcacttgtatcatgtttttcatgaggcatgctttgttatggagctgccagtaatcctctctttcacactaatcactagtgataaacgcgtgttttctttccttaccatcctacagaatagtttactggttacttgtgtacatatagtttcaatgctatgcttttgctttgctgtgagcaacaaattctcattctgtgaacccaagatgcacagatttttaggagcaagtatttttggtggcttgggcaaatattgcgctttatgtgaagagcaatacaaacgttacatcatatgaacttaaattttgctcagtgggcaggaggccaatattcattgtcattatctctttttctcaggatatcgctattgctgcaatgggacccattcagggtcttccggactacaactggttcaggcgccggacctacatgctccgttactagactctccaaccgatgtactatgtttacattctgcaaaggcaagataattgcctcttttggcatcagtatattatggcctcgtccatgcacattgtgtgtgcgacgtggaggaaatttttttgagcaccattttccttgttttctttgtccaaaaccaacaaagctgtcaataatgataggcaaattcaactgacgtggcttacttgagttgccacccgttgtttctacgatgaatcgttacccctacttatccttttttttattgcaagattgctttctttttcttggaataatttgatgaagctgcttatgtaaagatgatagttttgctgtgtcgactattgacaactgcacgaggtgcgaattgtaccgatctgttaatctcttattgcctcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0212700, RefSeq:Os03g0212700