Difference between revisions of "Os03g0216700"
(Created page with "{{JaponicaGene|
GeneName = Os03g0216700|
Description = Multi antimicrobial extrusion protein MatE family protein|
Version = NM_001055921.1 GI:115451570 GeneID:4332069|
Len...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0216700| | GeneName = Os03g0216700| | ||
Revision as of 19:30, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0216700 |
|---|---|
| Description |
Multi antimicrobial extrusion protein MatE family protein |
| Version |
NM_001055921.1 GI:115451570 GeneID:4332069 |
| Length |
10936 bp |
| Definition |
Oryza sativa Japonica Group Os03g0216700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:6159182..6170117 |
| Sequence Coding Region |
6159463..6159505,6159636..6159757,6159862..6159957,6160053..6160169,6160273..6160344 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:6159182..6170117 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:6159182..6170117 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctggtctgaagaagatggaggaggtcacagcagctgctgctgctgttgcagcgagcagtacggccgagaagcgtgcggccgccgtcgtcgtccccgacgcggcgctgacgatgaacggtgccgccggcgcggaggagaagacggcggcggctgcggcggcgccggaggatctgccggcgccagccgcattgtccggctggccgaggagggtggggctctacctcttcgtcatgaacatcaggagcgtgttcaagcttgacgagctcggatcagaggtgttgcgcattgccgtgccggcgtcgctggctctggcggcggatccgcttgcttccttggtagacacagcgttcatcggccgcttaggttcggtggagatagctgctgttggtgtttcaattgccatatttaaccaagtatccaaagtctgtatttacccccttgttagcgttacaacatcatttgtggctgaagaagacgctatcatcagtaaatgtatagaagaaaacagcagccaagatctggagaaagcttctcctgtggattcagaaaccaacaatctgcctgtatctggtcctgataaggtagaatgtgtcaattcatgtattcccaccgagtgtacaaatccctccgatcaagggtgcaagagaaagtacataccttctgtgacatcagcagtaatagttggctcatttcttgggctacttcaggctgtcttcctggtcttttcagcaaaatttgtattgaatatcatgggtgtcaagaatgattcaccaatgctaaggcctgcagttcgctacctaacaatcagatcacttggtgctcccgccgtattactgtctctggccatgcagggtgttttccgtggtttcaaagacacaaagacaccattgtatgccactgtggttggagatgcagcaaacatcatactagacccaattttgatgtttgtttgtcacatgggtgtcactggcgcagcagttgcccatgtcatttctcagtacctgataacgatgatactgctgtgtcggctcatccggcaagttgatgttatcccacctagccttaaatccctcaaatttgggcggtttcttggatgcgggttcctgctgcttgcaagggttgtggcagtgactttctgcgtcacgctggcgtcgtcgttagccgctcgccatggacctaccatcatggcggccttccagatctgctgccagctctggctcgccacatctcttcttgctgatggacttgccgtcgctgggcaggcagttcttgcaagcgcattcgccaagaatgataaaggcaaggttgttgttgcgacatctcgtgtactacagctgagcattgttcttggcatgggtctcactgttgtgcttggggttggcatgaagtttggggctggaattttcacaaaggacatcgacgtgatcgatgtcattcacaaaggcattccttttgtcgctggcacacagacgataaattcactagccttcgtgttcgatggcatcaacttcggagcatcagactacacatactcagcttactccatggttggtgtggctgctatctccataccctgcctagtatacctttctgctcataacggattcatcggtatatggatcgcattaacgatctacatgagcctgaggaccatagctagcacttggagaatgggggcagcaagggggccatgggtgttcctccggaagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAGLKKMEEVTAAAAAVAASSTAEKRAAAVVVPDAALTMNGAAG AEEKTAAAAAAPEDLPAPAALSGWPRRVGLYLFVMNIRSVFKLDELGSEVLRIAVPAS LALAADPLASLVDTAFIGRLGSVEIAAVGVSIAIFNQVSKVCIYPLVSVTTSFVAEED AIISKCIEENSSQDLEKASPVDSETNNLPVSGPDKVECVNSCIPTECTNPSDQGCKRK YIPSVTSAVIVGSFLGLLQAVFLVFSAKFVLNIMGVKNDSPMLRPAVRYLTIRSLGAP AVLLSLAMQGVFRGFKDTKTPLYATVVGDAANIILDPILMFVCHMGVTGAAVAHVISQ YLITMILLCRLIRQVDVIPPSLKSLKFGRFLGCGFLLLARVVAVTFCVTLASSLAARH GPTIMAAFQICCQLWLATSLLADGLAVAGQAVLASAFAKNDKGKVVVATSRVLQLSIV LGMGLTVVLGVGMKFGAGIFTKDIDVIDVIHKGIPFVAGTQTINSLAFVFDGINFGAS DYTYSAYSMVGVAAISIPCLVYLSAHNGFIGIWIALTIYMSLRTIASTWRMGAARGPW VFLRK</aaseq> |
| Gene Sequence |
<dnaseqindica>10613..10655#10361..10482#10161..10256#9949..10065#9774..9845#9486..9649#9298..9398#9097..9193#8843..8978#8543..8736#7973..8179#6754..6875#6407..6651#agcagcagcagaagcggcagcgtactcgtcgatcggtgcaggtccgtgcaagtgcaagagagtgcagtgcggtacagcgcgcgtgtggttgctgagcacttgtgctgcgcgggctacctacctgtttcgagccaggtttggttcaggtacgcgcgctgctctgcttcgctctgctccgctcgtttcctccgtttatgcgtgcatgcgattgcatggtcttctgcttggtttgctttgggtgcgttggatacttggatcagctggccgttgcttttgctggcggccgttgcgatcaaactcccaactccagcacacatagccggtcaggttattagcactggactgctaaactcgagcgcttcttcgaacttagtgcggtgccctagcgattatacgtgacatacatacatgtgtgcacgtcgatctcaagcaccgcgtatgtactgatgatcaccagtcacgtacgagcgctcgtctacatgaatgctactgactgtgaccgccgactggtgatgatgccgtatgtcgttttctaatccaagtaatgtgtaatgacattaaagaaaacgagatttagagggagagacgtccctccaaacattttttttaagatgaaattatgacatgttggagatcgaacacgtgatcttaggttgaaaccacataccattatcactggatctctaatgtgtaatgacatagtacatcattataataatagagcaagtaatcaaccaatggcaaccactgagaacatatacgaataggctgcattcagttgcgctagctgcggctacaacagttgtgaatggctgcagcgggcagccggtttgaactgccgcaactgtagcggttgcggtagcagagccatagtactggactatatattactactccttcggatcgtaaatatttatttatcacacttatatggttatcatacatcgaataaatatgttaattttctaaacatctaaatatcaagaaaatattaatgctcaatgttttaaaatttcacttgaaacggatctaaaacgacatgatagtttttttttttaccaaagggagcagtaactcattaacagaagctaaaagaacacaaaatctcttaaagccagttatatttgaatcctaccgagtagagagttatacacaaacaactgtcaccgtatgactggtgtttggtgccccattaatttatcataagttaattaagtatctgatcatatgatttagttttgagggaatttattacctatcaagtgaccaatatgagagaatttaattcttactgcaagaagtttctaaggttgtttgtctcccgatataaagtacgttcatcttgttggtgttatatattataaaaaaagaaaaaactatcttggtaagtggtgcacgtcaatgggccggtctgtatattgtagtgcctttcctccgttcatttcgaccaaacactcaaaagttagcaggcacgatctatctagatggtattagtcctccaaagtcgcttaattaatggtcatgacgcagctcgcatttcattgcttttgttgaagatatatgcagattgtgatatatgtacttttccaaaaaaaaaagtaaacaaaaaaaaagtgataccttaatcatattcactattcagatagtttagttattgttttgtcaatgtgttagttcctgccaattttattttggtgctctctcgcaggtgtgtttgagaggagaaaaaaagagaagattaagaaaacacacaaaataaggtgatatattagcgcatgattaattaattattaactgttttaaatttcaaaaatggattattatgattttttaaagcaactttcctattggaaatttttataaaaaatatactgtttactagttcgggaagcgtgtgcacggagaacgagagaaatctcatctcgttcaccagctgaatacaacttgacaacacaataggactctctattatcgaccatgcaacttaatctgttgccaaaattaaaagaaaaaaaaatctaaaatgaagtgtggaaatcatactgttacatgccgtgtggaactctgaatctctgatgacaagcattgaagcatctgatctttcaacaaagaatgttaaatcatctacctagtagaggaattttcttttatgtgtaaactttatggggaactaagatgcaaaagaatacgatatcatttgttagaatttttaaggatgcttggcgatattttgttaacttggcaatgttttgttaactttgctctttcttggaaggagatctgcatgcaaaacctagtttaacccaagttttacattcatgtatcttttgcagctagcgtattatagtacagagactccacttcgatccacaaaattaaggccagacttagcaaggtactactcctgccaatcaaattgagaaagagcactccactaactcttgtatcattggagtaaattatgtccatgcttattacaaactgctagtggctgaccagtaacattatcctggcactagtaggagactcggtggtgaccaacacatagtttatgtttcatgcttaactcgatgcatatagtcacagaagactgccttttgtcggttcaaagtttatggctgtatacccgaaaaaaagttacagaattgtagtgctgtgaaagtatctttcggtggcaaaattgtaggtaacattcttattttcaaatatccaaaccatacatttcagccatagctgcaagacaagcatacatatatttcatatctgaatttggacatagggtggtagctgttctcttttcttcactgtcattggaaagagtgaggaaggaaacactagaccacaatgggggaaaccaagaggatcatatcttttcatcctcccaccttgaagaacgggaggatcctaataagctatactagtagagaaagaagagagaaatggaaggccagatggaacgagacgagatgcaactacacacctcgagagagcctctaccctactgcaaatcattcggttgtagatttatggcaaaatttcgttggacctcgcatcaaaatgggttgattctacacatgcgtcactgatactacaaaaagacactgatgcatcaatcaactcgcgttaatcagtccatttcttgccgcgtgaaattgattcaaacctcgcattaatccacccatctataggaagataaaggaactaggttcaatgaatctgaagaattccatttgtcatcccaacatccgaggccaccttctcggagaatcttcatactgaatttttatcaagaccttacccatcctaaagcctagtcagcaatggagccaaatccccttagtgctggccttcttcccatgctcccttgccgcgttgatcgaatctccagtagtatagtctccctgtctggactgaaaattttctggaggatttattcggtttcttgcaaaattataggaaacgtatcctttcatatacacagcaatgtcccttttagagctaggagaacattctaagcttaaattctgttgcatcacaagttcagttacattccaacagggcaaccaaaacaggagtttgctgcgtaacacacattcgattcaggaaacaatccctgattcagcttttcttacgttcctttctgaccctgaaccatatcaacagcgactcaagaaaaggaaagctgtaatacggtaagccggtaattaaggcgatggagttgtatatatcagcatcagaacctaccaccaaaacatcatcagtccacttcacttcagctttctgaacctaccccggagcttagcattgtccacaagcaaaaaccttctttagcaacaagacgaagttgttcggcatttcgacttatgaacacatagtgatcagttgatcacccttattctgcaaaatatcccaacgtactatccgcgatggcaaaagcacatggatacaagttttttttttccattttgaagattggataagacttaagagtggtaggttgtctcgtttattttcctcctgaagttcagcagaagaacagaatgtgaaggacactagcgcggagattcgaagtcaatagtgcaaagctataactctccatatatatttagcaaataagaaagttcagataagattgaagagcataaccggtataacgttttcctacaagctgaagctgatattgaagtttagaatttgattttaggattaattgtaagaatttatttaacattttcgttacctaactccctttttataatgctattagttacatgctcgtacgttgtaatggtcaaaccaatataattatggatagattgggagctcgtaagttacgagccaggcccatataattagagaagaacagtggttactttttgaatatggacgtcccgcgtgcattgagaggaggggatgaaaggagaataactccgcttttaagatagtggagataagaagataggtaaaaagtctacccaatgttattctgaccaataatagagaaaaataacgaatctcccactagggaggaagttaaaagcacctataaagtttggccagtaactcgtttggcactaataatccaagaatcattattttgatcacaaatttaacgtttattgttagatgctgccaaatatataaagttccaatagagttttgaatctaatgcaacccttcccctcctaaaaaacagtggaagtttctctttatatgttttcttatcatgtttttctaagtatgggaaattacgtgagtaaaatagaaaatgtatatacagttgactatgggtcatattatagtgctagtgtgctactatcatattggtgtaacaagtacggttttgttttcagccatatgcattagagtaacaaatgtaactatgcatgctttaaaatataaacatatattataaggtttggttctctaccctgccaaattttggtagggtagaaatggagaaggtgttatttagtttgatgcagaattttaagtcctgtgggataataagatatgagtaaatgctcatattatagagaatatagattttgtataagagctatttggtatgaactaaattaaattttagcattaccaaattttaacatgttagaaaattacagaccactaaatcgttcttacattagaaaccacttattatatgatgatagtaactttgtaacctaccctgaaaggtggctggaaagagaggaactgtccaatcggtcactctcctgctatagtgctatcttcatatttccatactttttcttaggtgcccaaagcctccaaccttctcttacccaaataataatgatgatgatgataataataaactgtacgagaaatcaggtgtaactgaaaagcagagtccatggaacctcaccaatctcttcatcctcttttggtcaaaacaaggtcctgattaaatctctcaaattaagctgacccagtcacccagcccatgctgctcaccggcaaacctgtggctatcaccgatcgccacagcagtacaagtgatcgagtaggtgacggacaggcaggcaggcaggcatgctgacagcttcgttcgagcctctgtaacggcggcatggtgagcggctgccgtctgccgggcgccgaccgggtcggtcgacactgacgccggcgtccgttgcgcctttagaccacgcaggcgtaacagccgccatcaatacaatacgcatcaccccctgccacccaactccgtccgcacgcaacggatggctgcgcggcgcgcgctcgctggtgcaccccggatgaggatcctctaccataatgttactacgtacgttttcccgggccgacggcgcggcctcgggtcacgtactcgcgttcccgcctagctagtgtgctagcagtagaattagcccctcgcaccgtgcaacctggcagattttgacgggcgccggccggaggacgcgcgcgcggttatttaagcgcgacccgcgcacgcctcgttgcctcgcacagggcgcgctcgcttacgcttaagcttacgctgcgacgcgtcccccctgtgccgctgccgccgccgccgccgtgctttctgttttccgcccgttgcttgcatcctcacgcgcgtgcgagagggggggcgtacggatttcgttggttgtaaccgactggcaccggtagacacgttaccgccggtggcctctggcacacctctcgccgacgtcgtcgtctgctgatcgtcctctgccgtgttgcccctgtcgcagctgctgacgtcgtgataagcggagcgagcgcctcgctgcctctgagagaggccggtataagtacgggcgcgtctggctctctgcttggctgtgagcaccgcgagcacgtacagctccgcctcagacaagagcagaacacgtacgtttccccgcccggcaccggcatggctggtctgaagaagatggaggaggtcacagcagctgctgctgctgttgcagcgagcagtacggccgagaagcgtgcggccgccgtcgtcgtccccgacgcggcgctgacgatgaacggtgccgccggcgcggaggagaagacggcggcggctgcggcggcgccggaggatctgccggcgccagccgcattgtccggctggccgaggagggtggggctctacctcttcgtcatgaacatcaggttggttcgtcctctgctattaccatggcagtaacaaatcgcttccatttctcataatctctcttgcaccatggctcattcttgtgttgcaccaccacacaggagcgtgttcaagcttgacgagctcggatcagaggtgttgcgcattgccgtgccggcgtcgctggctctggcggcggatccgcttgcttccttggtagacacagcgttcatcggccgcttaggtgagcatgcgtcaccctgacatgtatgatttctctgacgttgccatggctgcatcttgttcacctgtttagtaagttccatcaacacagtgttcatacttaatttgctcggtatagataagtcatacagagggatttcttccaaatgtcagtgctaattatcagacaaatcatacaattgattttacaaatatatcgagcttgttggtactttatacttcatttccattttggtaagtttggcagtgtaaccaacttagtacagggatgtccctttccatttttttaagagcggcaatgtcgttttcatttgtatatatgggtggccaattgaataagtgggtgccgaacgccaaatacttccaacaaatgtgctctcgaattattcattcatgtttgctaatggtgcctagccgattcttgtcttttgtcaatattgacaagtcaataagatcttacctgcatgactccatgtagctgttactgatgccataatgttccattttgttctttctatcctttgatcaagtcagatatatgtttttttatatgtatttatattggaggttttattgtaattttcttatttatatcctccagtccagttagatatatatttttcttatataagagcttttaatgtaacggtattcttcttgtcatatgatgggtttctgttgacaatactagtttttatttgtttctttaagtattgcaaaatgtcgtttctgagttttcatttgcatgctgagttcatcctttttatctcattacaattggttggtcaggtacatgctgagttcatcctttttgttttgtcttttacaacaaacagtccatctgtttccttttcgtcaaatatgtcatggtatctctattttcttctttcctatttttaatatgctcccttttctttacacaaaattcatatagttgttcacttttagtatgtctgataagcatatttagattgcttttgcgtgttgaagttatttcaaaggaatagtttggaggatcaatttgttttcagaaaacaagcagctgctgttgatctgaaacttaatgccgtgaaatatttgtacaattgatttggtcaggttcggtggagatagctgctgttggtgtttcaattgccatatttaaccaagtatccaaagtctgtatttacccccttgttagcgttacaacatcatttgtggctgaagaagacgctatcatcagtaaatgtatagaagaaaacagcagccaagatctggagaaagcttctcctgtggattcagaaaccaacaatctgcctgtatctggtactgatttgtcggaacatttttgagtttcagaattttgaatagcagtaacttaggccccgttcttttatccaaccagagttggatgaagattaagattttcgttgcacacttttcaaacatctaaacggtgtgtttcgtgcgaaaactttatatatggaagttgctctaaaatatcatgcgaatctattttttaagtttgtaataattaaaactcaatcaatcatacgttaataccacctcgttttgcataaaaaacttaatcttaatcttcatcttcatctgcaggagaaaagaacaccgccttaattcaccacaaatctgaactcgctatttgtttattttgtcaaactttgtttccaggtcctgataaggtagaatgtgtcaattcatgtattcccaccgagtgtacaaatccctccgatcaagggtgcaagagaaagtacataccttctgtgacatcagcagtaatagttggctcatttcttgggctacttcaggctgtcttcctggtcttttcagcaaaatttgtattgaatatcatgggtgtcaagaatgtaagtactatttcctttatctcattctttaagcttcagttactcgtgtactttgtgtgactccttgatcctaactcattttttgtttacatcacaacattttcaggattcaccaatgctaaggcctgcagttcgctacctaacaatcagatcacttggtgctcccgccgtattactgtctctggccatgcagggtgttttccgtggtttcaaagacacaaagacaccattgtatgccactggtaagaacatctactgatcatgtccttattttggttggatatcaactttgattacagtcaggaagaatatttgaagtttaatgtgcctgacattgctaacgtttcttgtttctttcagtggttggagatgcagcaaacatcatactagacccaattttgatgtttgtttgtcacatgggtgtcactggcgcagcagttgcccatgtcatttctcagtaagtttcagtgtattaccaccagtttcagcatcatctacagctcctgcatttcatttcattgatcaatttctcctaacttttctcacttctcgttattgcaggtacctgataacgatgatactgctgtgtcggctcatccggcaagttgatgttatcccacctagccttaaatccctcaaatttgggcggtttcttggatgcggtgagataccattgggatactgaaactggataacatctccttaactgaaccttgagaatgatactgaagtctctctttttttttcagggttcctgctgcttgcaagggttgtggcagtgactttctgcgtcacgctggcgtcgtcgttagccgctcgccatggacctaccatcatggcggccttccagatctgctgccagctctggctcgccacatctcttcttgctgatggacttgccgtcgctgggcaggtcagattaccatgtcctaatctcatatatgtctaatctcatatatgtgttcatagagcagctgtttcagactttcagctgtgttcggttgttcatcgatctgtaattttcctcatggttgcaggcagttcttgcaagcgcattcgccaagaatgataaaggcaaggttgttgttgcgacatctcgtgtactacaggtcagtcacagtttgatatttcagaatcttgctcctgtcacttctcctttctactgcgagcaacagggatcatgctaacagtactgttctcatcaccttgcagctgagcattgttcttggcatgggtctcactgttgtgcttggggttggcatgaagtttggggctggaattttcacaaaggacatcgacgtgatcgatgtcattcacaaaggcattcctgtaagaatatctgtcaagatgttcagagggtagcaacatgtttaactattttccaagattcagacattgactgatagctttgttttggggttcagtttgtcgctggcacacagacgataaattcactagccttcgtgttcgatggcatcaacttcggagcatcagactacacatactcagcttactccatggtaaatccctttcttcacacatatgagctctgaatattccctggaacatttcatctctgaaaatcttcctaacaatgaatcaatgctctaatgaaaatctccaggttggtgtggctgctatctccataccctgcctagtatacctttctgctcataacggattcatcggtatatggatcgcattaacgatctacatgagcctgaggaccatagctagcacttggaggtatatcagtataggatatactacagccttatccgctcttcattgcagccatttcttcagtagctcttagctcttagcctttaggattcatcatatactaggttgctaattacttctgctctatctgcagaatgggggcagcaagggggccatgggtgttcctccggaagtgatgggttttcaacttctcatggcgattattattaatcctcagcgttttgctggtagatagccatgcatactagtactagctctcatgtaattaaaaataagtacagttcttagcgcatgtcgtggtgtcgagtttattgcttcgtgaatcgggatcgtatctgactcattgtgggggagaggatacaccgttctttggtgtttgttgtgtgccggcgatggcaattgtttctgtgatatatgatattgaagtattatacattaattagtagtacattggatc</dnaseqindica> 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