Difference between revisions of "Os03g0223200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0223200| Description = Alcohol dehydrogenase superfamily, zinc-containing protein| Version = NM_001186391.1 GI:297721912 GeneID:9266669| Le...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0223200|
 
GeneName = Os03g0223200|

Revision as of 19:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0223200

Description

Alcohol dehydrogenase superfamily, zinc-containing protein

Version

NM_001186391.1 GI:297721912 GeneID:9266669

Length

2372 bp

Definition

Oryza sativa Japonica Group Os03g0223200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6480418..6482789

Sequence Coding Region

6480418..6480500,6481482..6481595,6481690..6482221,6482294..6482447,6482497..6482789

Expression

GEO Profiles:Os03g0223200

Genome Context

<gbrowseImage1> name=NC_008396:6480418..6482789 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6480418..6482789 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagcaacctaagatggtgaccggatgggcggcaagagacgccaacgggctgctctctcctttctcttaccccctcagagctaagggagacgaagacgtcgttgtcaagatactgttctgtggcatttgccactctgatctttctactatcaagaacgagtggggcaacgccaagtatcccgtagtaccaggtcatgaaatcgttggggtcgtcgccgaggtcgggagcagcgtggcgaggttcgccgccggcgacactgtcggcgtcgggtacatcgccagcacatgccgcgcctgcgccaactgccgcgacggcttcgagaactactgcgcgggcctcgtgccgtccttcaacgccgcgctccccgacggcgctacggtgcacggcggcttctcggagctggccgtcgtcaaccagcggtacgtcgtccggatccccggcggcggcggcggcgcgtcgccggcgccgctcgaccgcttggcgccgctgctgtgcgccggcgtcacggtgtactgccccatgaggcggctcgggctggacaggccaggggtgcacctcggcgtggccgggctcggcggcctcggccatctcgctgtcaagttcggcaaggcgttcggcgtgaaggtgaccgtgatcagcaccagcccgtggaaggaagcggaggccgtggagaggcttggcgccgacgcgttcttgctcagcaccaacgccgaacagatgaaggcagctgcgggcaccatggatggcatcatcgacacggtctcggcggtgcacgacctgacgccactcatcacgctgctgcggactcacggccagctcgtcccggtcggatcgccgggaaagccggtgcaactagccctgtaccctctgcaatcaggcccatcaccagttggcccgcgaatagattgggctggaggcccaatcagagctagatgggccgtgctcatggtgtgcgatgtggcagatgggaagagcgtggccgggagcatgatcggcgggatgagggatacgcaggagatggtcgacttcgccgtcgagcacggcgtcgccgccgaggtggaggtcatcggcatggaggacgtcaacggcgcgatggagaggctgcagaagggagacgtgaggtacaggtttgtgatcgacgtagccaacacaatggcccgtgctcgttag</cdnaseq>

Protein Sequence

<aaseq>MEQQPKMVTGWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGI CHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACA NCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLD RLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSP WKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLV PVGSPGKPVQLALYPLQSGPSPVGPRIDWAGGPIRARWAVLMVCDVADGKSVAGSMIG GMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTMARAR</aaseq>

Gene Sequence

<dnaseqindica>1..83#1065..1178#1273..1804#1877..2030#2080..2372#atggagcagcaacctaagatggtgaccggatgggcggcaagagacgccaacgggctgctctctcctttctcttaccccctcaggtgatctctagctctcttgctctatctttttcctgtgtgttcagatgttcctgggtcttgaaatattcaaagagaagttcacacaaaattcttgagttataccgttttctttttatgaaagcaaagttactgataaatagtcaatagtcatctccattacttcgttaattaattgtagtcaggaattctagttttgaacgggtaccatcaaactgtatcgatcgagatttatgaggaatatggaattgcctttgacaattgacgcaccaagcacataaacgctgccgtctacgttttctaccggtctccggtgatattttctttgtgtaatgaccgatgagaagtactgcatggctcattggttctgtaactctgttaattattgaaaaataactaaattgcttcagtcagtcagtagtaaccaatcgttgggttgccactctaacgaaaacatcactggtgtactgctatatagaaattagaacactgagaactaaagaggtagtattgtctgttgagttttgagcatttttcaagaaatttgcagctacacaatgcgttctgaattacattttttgattaaaaagaaacttatgcttggattgcaaagatatatcatttactgcaggaaagtaaaggctacacgggtgatgaccaattatgcactatacattcatcatgaagcctcgattgccatcttttagaaagaatgaatgatagccattcagtaggtagtagtggcgacgcactcatacccaacttccacggctgaaaggaatcaaaccattttggcaccgatggcttgtttgcacgccattgggcgagttcgagtcgttgcaacagcatttcttccattattcacctgctgatttatgtttatgcattgtcaaactatatgcattctccccaattgttttctttttcgtgagtacagaaaagggttaattaatcgtcatttccaccgtgcatttcatatttcagagctaagggagacgaagacgtcgttgtcaagatactgttctgtggcatttgccactctgatctttctactatcaagaacgagtggggcaacgccaagtatcccgtagtaccagggtcagtacgtacacatgcaatgcaaatcggctaatgcgcaacagaattatccagagatatattattgatcgatcgttttgcgtgcttaatccagtcatgaaatcgttggggtcgtcgccgaggtcgggagcagcgtggcgaggttcgccgccggcgacactgtcggcgtcgggtacatcgccagcacatgccgcgcctgcgccaactgccgcgacggcttcgagaactactgcgcgggcctcgtgccgtccttcaacgccgcgctccccgacggcgctacggtgcacggcggcttctcggagctggccgtcgtcaaccagcggtacgtcgtccggatccccggcggcggcggcggcgcgtcgccggcgccgctcgaccgcttggcgccgctgctgtgcgccggcgtcacggtgtactgccccatgaggcggctcgggctggacaggccaggggtgcacctcggcgtggccgggctcggcggcctcggccatctcgctgtcaagttcggcaaggcgttcggcgtgaaggtgaccgtgatcagcaccagcccgtggaaggaagcggaggccgtggagaggcttggcgccgacgcgttcttgctcagcaccaacgccgaacagatgaaggtgaccaaaaaacaccgatctgtgcgccattttgcatccgaattctgaagctaagaaccaccatatgtgcaggcagctgcgggcaccatggatggcatcatcgacacggtctcggcggtgcacgacctgacgccactcatcacgctgctgcggactcacggccagctcgtcccggtcggatcgccgggaaagccggtgcaactagccctgtaccctctgcaatcaggtgcgtgtggttcatcattactgggccttacagcctcacaccaaaccaggcccatcaccagttggcccgcgaatagattgggctggaggcccaatcagagctagatgggccgtgctcatggtgtgcgatgtggcagatgggaagagcgtggccgggagcatgatcggcgggatgagggatacgcaggagatggtcgacttcgccgtcgagcacggcgtcgccgccgaggtggaggtcatcggcatggaggacgtcaacggcgcgatggagaggctgcagaagggagacgtgaggtacaggtttgtgatcgacgtagccaacacaatggcccgtgctcgttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0223200, RefSeq:Os03g0223200