Difference between revisions of "Os03g0233800"

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(Created page with "{{JaponicaGene| GeneName = Os03g0233800| Description = Protein of unknown function DUF547 domain containing protein| Version = NM_001056010.1 GI:115451748 GeneID:4332165| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0233800|
 
GeneName = Os03g0233800|

Revision as of 19:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0233800

Description

Protein of unknown function DUF547 domain containing protein

Version

NM_001056010.1 GI:115451748 GeneID:4332165

Length

3804 bp

Definition

Oryza sativa Japonica Group Os03g0233800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7137682..7141485

Sequence Coding Region

7138165..7138224,7138514..7138597,7138940..7139056,7139168..7139605,7139722..7140128
,7140204..7140303,7140383..7140439,7140540..7140626,7140889..7141377

Expression

GEO Profiles:Os03g0233800

Genome Context

<gbrowseImage1> name=NC_008396:7137682..7141485 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7137682..7141485 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcagaatggatggcacggatttgtcttccccaaggtgcaatgttcagcatctacagaatgccgaagaactgaaggatcagaatagcaccaataagaggctgccccggactacagagctcccatgctctttgatacaagaggtccaacaccttgagaagcgactaaatgatcaatttgctatgcggcgtgctttggagaaagcattaggttataagccttgtgccattcattcatccaatgagagctgcattccaaagcctactgaggaactaataaaggagattgctgtgctggagctagaggtcatatgcttggagcaacatctcctagcactctaccggaaggcctttgatcaacaaatttgcagcgtgtcttcttcctgtgacatggaaatcaacaagcagtcagcaaggtcattctcaggtatactcacaggatcttcagaactggatttctcaaccccaaggaaacaccaactcctgcagtccagtggcatggtcatggcacgcaagtctacaccgacaactctcactagcgaaaccagaacttcacattacaatgacaagactggtatcggacgcagccattcctcgctcctgcagcgttccatttgttcagccagagtatctccttcagcaaacaatcttgctagggctctcaaaccatgccatactttgcctctatcctttgtcgaggagggcaagtgcatggatcctggtattgtgagcctggcggatatcctagggaccaggatagcagatcatgttcctcaaacaccgaacaaaatatctgaggacatgatcaaatgcattgcttcgatatacataaggattagggacttcaatgccgtgcaacatcccttcttcccctcaccatgctcatcattttcatcagcgagcgggctctcttccaaatacactggggatatatggagcccaagatgtaggaaagagggctatattgaggcctggcaagacgatgcgttaggaactggcgaatcaagatacttcagtcaacaatatgattctgtgattgaggtgtctgctctttgcaagggggcccagaggtctgctgatgttaaagacatgctacacaaatacaagtctcttgtacagctgctagaaagtgctgatctcaacggaatgaaaaatgaagaaaaaattgctttctggatcaatgtgcacaatgccatgatgatgcatgcccatatagaatacgggattccgcaaagtaacagcaagagaatattgcttactaagttatcttacctcatcagtggccagagagtaaacccggagttgatagagtaccatatcctatgctgccgagtgcactctcctacacagtggctgagactactcctgtacccgaaatggaagtccaaggagaaggaagacctgcaggggttcgccgtcgacaggccggagccgctggtgcacttcgcgctgtcgtcggggagccactccgacccggtggtgcggttgtaccggccggagcgcctcctccagcagctggaggcggcgagggacgagttcgtccgcgccaacgtcggcgtccgcggggggcggcgcgggcgcgggcgccgggtgctcctcctcctcccgaagctcctcgagccgtactcgagggacgccggcctcggtgcgcacgacctcctccgcgcggtggagtcctgcctcccggagccgctccggccggcggcgcagcaggcggcgcggtcgcgcggcggcggcggcggcgtcgagtggaggccccacaacccggccttccgctacctgctcgcgcgggagctcgtgggcccacccgcgccaacggcccacctatcctccacgtaa</cdnaseq>

Protein Sequence

<aaseq>MLRMDGTDLSSPRCNVQHLQNAEELKDQNSTNKRLPRTTELPCS LIQEVQHLEKRLNDQFAMRRALEKALGYKPCAIHSSNESCIPKPTEELIKEIAVLELE VICLEQHLLALYRKAFDQQICSVSSSCDMEINKQSARSFSGILTGSSELDFSTPRKHQ LLQSSGMVMARKSTPTTLTSETRTSHYNDKTGIGRSHSSLLQRSICSARVSPSANNLA RALKPCHTLPLSFVEEGKCMDPGIVSLADILGTRIADHVPQTPNKISEDMIKCIASIY IRIRDFNAVQHPFFPSPCSSFSSASGLSSKYTGDIWSPRCRKEGYIEAWQDDALGTGE SRYFSQQYDSVIEVSALCKGAQRSADVKDMLHKYKSLVQLLESADLNGMKNEEKIAFW INVHNAMMMHAHIEYGIPQSNSKRILLTKLSYLISGQRVNPELIEYHILCCRVHSPTQ WLRLLLYPKWKSKEKEDLQGFAVDRPEPLVHFALSSGSHSDPVVRLYRPERLLQQLEA ARDEFVRANVGVRGGRRGRGRRVLLLLPKLLEPYSRDAGLGAHDLLRAVESCLPEPLR PAAQQAARSRGGGGGVEWRPHNPAFRYLLARELVGPPAPTAHLSST</aaseq>

Gene Sequence

<dnaseqindica>484..543#833..916#1259..1375#1487..1924#2041..2447#2523..2622#2702..2758#2859..2945#3208..3696#ggctcccacttcctttggatgattttatctgcaaaggtgagatgcttccccattccatgcagtctctaccctgcatcatttgctctttttagttctctaactgatagtgtagttttagtggttacagagttcaactcttcgctaagatgggctcacctgtgcaaagattagagaggaggagcccttcttgagctcagaggtgcagtgcaggcttgcagcggagttgttcacttgtaggctccttccttaacctgctcaatgtatcatagccgctccaagaggtgagaagcttgtagctttggttacagcaccctggttggggttgcaggttgaaaataaagcttgtagctttacttcttgttaccaagttacagatattgatctctgaccagatgctatgattctacatgttttagataggatcagttcttggctaatgcctaatgatcttgacgaatttgcatcggcagcgactctgttagaatgctcagaatggatggcacggatttgtcttccccaaggtgcaatgttcagcatctacaggtaatttggtggtggtggagataaaatggcttgttacttattgcttcatttgttcattctcttgactccaagcatgtgggtcggtgtcatttttgctggtaaaaaatttcacagcagaatttcccctcctttttccccttaactttctgaaccattttcttctgcccaagatcagtacagaactcttgactagtgcatttgctatgtccctttggaatataatctctctttttttcagtccataacccaaaacatctcacttttctttctatttttctgttcacggaagaatgccgaagaactgaaggatcagaatagcaccaataagaggctgccccggactacagagctcccatgctctttgatacaagaggtaagaagtagacatcgcaagtattgcacaaagtttccgatgttgtagcatatttgtgtgatacatggactactttaaagcgtgttaatgatgtgaaattttaagattcagttgggaagtcgtagtacagagttccgtaacaggcattcattcctgcattgctagagttaaagagacatcccaattttgagtagtgccaagtacagggtatcctttattttgtcctgcccaagtgtagcataagactaaacaaatggttctactgtaatttgtaaggtaatagtgatactacagaattgcagaactgcagattggttttgatacatagagttagctctgcaggtccaacaccttgagaagcgactaaatgatcaatttgctatgcggcgtgctttggagaaagcattaggttataagccttgtgccattcattcatccaatgagagctgcattccaaaggtaaaattttcctccacttttttcctcaattgtatcgcaaatgtttttgaaggctgtgttttcccgttgcttactgaaagcttctgtgtctttcttctcatgttgtctcagcctactgaggaactaataaaggagattgctgtgctggagctagaggtcatatgcttggagcaacatctcctagcactctaccggaaggcctttgatcaacaaatttgcagcgtgtcttcttcctgtgacatggaaatcaacaagcagtcagcaaggtcattctcaggtatactcacaggatcttcagaactggatttctcaaccccaaggaaacaccaactcctgcagtccagtggcatggtcatggcacgcaagtctacaccgacaactctcactagcgaaaccagaacttcacattacaatgacaagactggtatcggacgcagccattcctcgctcctgcagcgttccatttgttcagccagagtatctccttcagcaaacaatcttgctagggctctcaaaccatgccatactttgcctctatcctttgtcgaggtgcaggacgatgtctgaaaactctctttcatttctgacctgttaaaccactttgctatcagatctttgtcatatacttgtaacggtgttgatactgacataattgaaatgaccaggagggcaagtgcatggatcctggtattgtgagcctggcggatatcctagggaccaggatagcagatcatgttcctcaaacaccgaacaaaatatctgaggacatgatcaaatgcattgcttcgatatacataaggattagggacttcaatgccgtgcaacatcccttcttcccctcaccatgctcatcattttcatcagcgagcgggctctcttccaaatacactggggatatatggagcccaagatgtaggaaagagggctatattgaggcctggcaagacgatgcgttaggaactggcgaatcaagatacttcagtcaacaatatgattctgtgattgaggtgtctgctctttgcaagggggcccagaggtctgctgatgttaaagacatgctacacaaatacaagtgagtattgttcatgacatgctggaaatgatgcataaatctatttgcagactagtaaaagatgttattctgcaggtctcttgtacagctgctagaaagtgctgatctcaacggaatgaaaaatgaagaaaaaattgctttctggatcaatgtgcacaatgccatgatgatgcatgtaactagtttcttaacccacatttctgtcttgctatatttcttcaattgtggagtctaatgttgacaatttcttttaggcccatatagaatacgggattccgcaaagtaacagcaagagaatattgcttactaaggtggaaaacatcctcaaactgcaattttcttagatagaatgatatagcagtatctcattccgtatgaaatcataatctggtaacaacttctgtgccacagttatcttacctcatcagtggccagagagtaaacccggagttgatagagtaccatatcctatgctgccgagtgcactctcctacacaggtttgtcctacttcctgcattttacaacctccccatcaaaaaaaaaagaaaaacgaaaatattagggaatgacctaatatcaaataaatataaggagtgaggcttcgaaccggttagctcaccaccttaagaagctagccggaagaccctggagcgtctctcacaacctccccttccaaagtccctgaaaatttagtcacagtttgacctgcttgagtgattggtaaaatttgccatcttgaattgcatatgatttgtgcagtggctgagactactcctgtacccgaaatggaagtccaaggagaaggaagacctgcaggggttcgccgtcgacaggccggagccgctggtgcacttcgcgctgtcgtcggggagccactccgacccggtggtgcggttgtaccggccggagcgcctcctccagcagctggaggcggcgagggacgagttcgtccgcgccaacgtcggcgtccgcggggggcggcgcgggcgcgggcgccgggtgctcctcctcctcccgaagctcctcgagccgtactcgagggacgccggcctcggtgcgcacgacctcctccgcgcggtggagtcctgcctcccggagccgctccggccggcggcgcagcaggcggcgcggtcgcgcggcggcggcggcggcgtcgagtggaggccccacaacccggccttccgctacctgctcgcgcgggagctcgtgggcccacccgcgccaacggcccacctatcctccacgtaaagtttcacggcccaatgtacagagccttgtaaagttgatattttgggcccggcccaacaaacttggaaagttagttatctgggcctgaaaagaggccgtggcttttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0233800, RefSeq:Os03g0233800