Difference between revisions of "Os10g0180000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0180000| Description = NpGUT1 homolog| Version = NM_001070783.1 GI:115481309 GeneID:4348204| Length = 3436 bp| Definition = Oryza sativa J...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0180000|
 
GeneName = Os10g0180000|

Revision as of 21:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0180000

Description

NpGUT1 homolog

Version

NM_001070783.1 GI:115481309 GeneID:4348204

Length

3436 bp

Definition

Oryza sativa Japonica Group Os10g0180000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5167605..5171040

Sequence Coding Region

5167948..5168461,5168764..5169005,5169612..5169976,5170762..5170894

Expression

GEO Profiles:Os10g0180000

Genome Context

<gbrowseImage1> name=NC_008403:5167605..5171040 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5167605..5171040 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacgaggaggaggagtgcgcgagcgcgagcgcggccgccgctggccatgccgctcgccgtgcttcttctcttcgcctgttcttccggcgtcgcagccgcggccgctcagggcatcgagcggatcaaagacgatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatgtttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatggggccatcccctgaccaccaagtctccacgcatgatgagaagtgcgatcaagttcatctccaagtactggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgactttgcagcgtgcttctacttccaggaggcgaaggctattgagcgaggcatccttccggtgctgcgccgtgctacgctggtgcagacgtttgggcagaagaaccatgcgtgtctcaaggatggctccatcacagtcccgccgtatactcctgctcacaagatcagagctcatcttgttccaccagagactcctcggtcaatctttgtctacttccgtggtttgttctatgatacttcgaatgatcctgagggtggttactatgcaaggggcgcccgtgcatcggtgtgggagaacttcaagaacaacccgatgttcgacatctctacggaccacccccaaacctactacgaggacatgcagcgtgcagtcttctgcctgtgcccgctgggctgggcgccatggagccctcgtctggtggaggccgtggtgttcggctgcatcccggtgatcatcgcagacgacatcgtcctccccttctccgacgcgatcccgtgggaggagatcgccgtgttcgtggccgaggacgatgtcccgcagctggacaccatcctgacctccataccaacggaggtgatcctccggaagcaggcgatgctcgcggagccgtcgatgaagcagaccatgctgttcccgcagcctgcggagcccggggatggcttccaccaggtgatgaacgcgctggcgaggaagctgccccatggcagggatgtgttcctcaagcccgggcagaaggtgctcaactggaccgaggggacccgggaagacctgaagccgtggtag</cdnaseq>

Protein Sequence

<aaseq>MGTRRRSARARARPPLAMPLAVLLLFACSSGVAAAAAQGIERIK DDPVGKLKVYVYELPPKYNKNIVAKDSRCLSHMFATEIFMHRFLLSSAIRTSNPDEAD WFYTPVYTTCDLTPWGHPLTTKSPRMMRSAIKFISKYWPYWNRTEGADHFFVVPHDFA ACFYFQEAKAIERGILPVLRRATLVQTFGQKNHACLKDGSITVPPYTPAHKIRAHLVP PETPRSIFVYFRGLFYDTSNDPEGGYYARGARASVWENFKNNPMFDISTDHPQTYYED MQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFSDAIPWEEIAVFVAEDD VPQLDTILTSIPTEVILRKQAMLAEPSMKQTMLFPQPAEPGDGFHQVMNALARKLPHG RDVFLKPGQKVLNWTEGTREDLKPW</aaseq>

Gene Sequence

<dnaseqindica>2580..3093#2036..2277#1065..1429#147..279#attctgaattctcccatgccttctcctggtaaagaataatcccaccacctccctcctctactacctctccctccccccaaactcgagcctccatctccctccccgatccagacaccgatcgaggcgttgacgacgacgtctagctcatggggacgaggaggaggagtgcgcgagcgcgagcgcggccgccgctggccatgccgctcgccgtgcttcttctcttcgcctgttcttccggcgtcgcagccgcggccgctcagggcatcgagcggatcaaaggtatgtgcgtctgttgctccggtaatccaattaattacgcgccgtcggttgttgcatagatctgaggaatcacacgcgtgctatgcccctcgtcgcgtttttggtggccggaatttgattcggtcgagtgctctctgctatgctatcgcactgaacagagtgctccaaaatcttgagatcgaatctatttatttcatctatgtgatgcgtcgtcaatcgattatattatatatataatcctgacttgaatatgctgagcagctgaccataaatgaagtttgattaattcttttccatgtagcaagacttctatgctatcgtagctgttccattactttttctttgcctgctttctcgctactccctcggccacaaaaattagataatctttgcttacttattgatccaaaaacaagttcatcattaattattggtccaaaaacaagttcatcattaagtaatcattttattagaatttgtgaaagtagtgaacagatgtattcgaagtagataaaatagcatacaactttattaggatttgataaaatggagggtattctagtcttttcttttatatctattggtatgtgtgggatggccggattgtttaaaaatggagttattttgggatggatgaagtgctagtatagcttcaataattatgctttgactgaagaattaaaaagaacactttcagcaatgttttaactccatttatattaactttccttgctcgcggatatgattaaaattcacgaagtgctgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatgtttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatggggccatcccctgaccaccaagtctccacgcatgatgagaagtgcgatcaagttcatctccaagtactggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgactttgcagcgtgcttctacttccaggtgagtcatgtacaaggttcggattcggaaaattttcagtaattttgaactccattgagaagaaattatttagactgcaaactttagttttttgtggattagcaaaatttgtgttaactcggtcaaaatttgttcaatcttcaaattgtatgggccttggtcatacatagtgccataaaccatgaatcatcctctcctatacactccctccatttgaaaaatataagtatttttaattcaaaatgcgtagttctaaggcgataatttcaatgtgcgggaatccatgtattttcagccaatcagatgcttgggataggaatttaagcaattcaaaatttgaaatttgactaataaaatgactaaaaacagaagttttccgttaaccttgatctttgctagacaatcagcaaatgctcatattttataacggagagagagtgtattattacccatgtaacgtggaatatgcaaactcatagaatggaaattcatcctagtaacgaagccacacacaacacctgttatttatcccttactcatgtttattcgcttctagcatcatgtacatccaacgtgcattcagatcaacatgttcctacttttcaggaggcgaaggctattgagcgaggcatccttccggtgctgcgccgtgctacgctggtgcagacgtttgggcagaagaaccatgcgtgtctcaaggatggctccatcacagtcccgccgtatactcctgctcacaagatcagagctcatcttgttccaccagagactcctcggtcaatctttgtctacttccgtggtttgttctatgatacttcgaatgatcctgagggtggttactatgcaaggtatgcacctaattaaattatgcagctgaaaagctgtaggtcttaatcaatcattgattagaaagtcttgatacacctaccattaggttctatattgtgtaaagcctaagggaattgatggatctgaagtagcagaaattcaggaatatttttgccctccaaattttgaaattacatgataacaaaatttgaataaattttgcaaaattaaaaaaaaaaagttgctgggtgaggggaagggtggcaaggtggttgaaatttcataccaaaatgttgaatcctgcctaacatatgcaatgcaggggcgcccgtgcatcggtgtgggagaacttcaagaacaacccgatgttcgacatctctacggaccacccccaaacctactacgaggacatgcagcgtgcagtcttctgcctgtgcccgctgggctgggcgccatggagccctcgtctggtggaggccgtggtgttcggctgcatcccggtgatcatcgcagacgacatcgtcctccccttctccgacgcgatcccgtgggaggagatcgccgtgttcgtggccgaggacgatgtcccgcagctggacaccatcctgacctccataccaacggaggtgatcctccggaagcaggcgatgctcgcggagccgtcgatgaagcagaccatgctgttcccgcagcctgcggagcccggggatggcttccaccaggtgatgaacgcgctggcgaggaagctgccccatggcagggatgtgttcctcaagcccgggcagaaggtgctcaactggaccgaggggacccgggaagacctgaagccgtggtagatagatatatacagtatatgatagtgttatggcaccattgccattcaccatggctggtgttcttgtgtaaatgacaccaccggatgagaagctgatcaatgaggatatattgatgatgatgagcgaaccacaccattgaatgtaaagctccctttccttgcttctttttaaggccatgtgcctgtatggcaatgtctgttttgaccattgttgtagtgttagcgtattacaggtcatggattatgtaatactagtcaataacccatacgttacaccgtgcaacttgcacaggctatttgttcatatatatataaaacataaatagtaaaattttgtcataggc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0180000, RefSeq:Os10g0180000