Difference between revisions of "Os03g0240500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0240500| Description = Similar to Toc34-2 protein| Version = NM_001056043.1 GI:115451814 GeneID:4332203| Length = 4023 bp| Definition = Or...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0240500|
 
GeneName = Os03g0240500|

Revision as of 19:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0240500

Description

Similar to Toc34-2 protein

Version

NM_001056043.1 GI:115451814 GeneID:4332203

Length

4023 bp

Definition

Oryza sativa Japonica Group Os03g0240500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7483385..7487407

Sequence Coding Region

7483601..7483753,7483855..7484016,7484104..7484172,7485225..7485489,7486506..7486630
,7486719..7486826,7486995..7487096

Expression

GEO Profiles:Os03g0240500

Genome Context

<gbrowseImage1> name=NC_008396:7483385..7487407 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7483385..7487407 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcggcgccgataccccgcgagtgggtggggctgcagcagtttccggcggctacccagaccaagctgcacgagctcctcggcaagctcaaggaggagaatgtgagcacattgacaattctggtgatggggaagggcggggtggggaagtcatccaccgtcaactccatcgttggcgagagggtcgctactgtcagcgccttccagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttgaacattattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgagatcataaaaaggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattggatgcatacagaatggacacgttggatgatcaagttattagagctgtcaccaattcatttggaaaggccatttggcgaagaacattggttgtattaacacatgctcagctctcaccacctgatggacttgactataacgatttctttacaaaaagatctgagtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaacttggggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaatggagagaaggttctccctgatggaactccatggattccgaacttgatgaaagagattactactgttgtctcaaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcccaacaatcgctggaagatgttcataccgctcatccttatggtggagtactttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacgggaagctagatgactgggaacagcgttacagagacttggttggaagcaaggacccggtagaccagaaaggttcatcatccggcaaccgcaaggcttga</cdnaseq>

Protein Sequence

<aaseq>MSAAPIPREWVGLQQFPAATQTKLHELLGKLKEENVSTLTILVM GKGGVGKSSTVNSIVGERVATVSAFQSEGLRPMMCSRTRAGFTLNIIDTPGLIEGGYI NEQAVEIIKRFLLGKTIDVLLYVDRLDAYRMDTLDDQVIRAVTNSFGKAIWRRTLVVL THAQLSPPDGLDYNDFFTKRSESLLRYIRAGAGVSKRELGDFPLPIALVENSGRCKTN ENGEKVLPDGTPWIPNLMKEITTVVSNGSKSIHVDQKLIDGPNPNNRWKMFIPLILMV EYFLVVKGIRRAIHADISNGKLDDWEQRYRDLVGSKDPVDQKGSSSGNRKA</aaseq>

Gene Sequence

<dnaseqindica>3655..3807#3392..3553#3236..3304#1919..2183#778..902#582..689#312..413#gaagaaaagaaaagttcatctcctcctctccttatcccttcccttcaccaaaacccccccgacaccgagcccctcctcctcgacctcgccgcaaatcctccgccgctcctccgccgctagggcataaccgcccgcctctcgccggcatccgcatctcccggtaagcattccgtccgagtctccacgtggtcctcgcggccgccgccctgcgccctgtccaaattgggtcggggtttctgatttgattggttggtccatgtgttaggggaagggaagggaagggaagggaaggaaggaaggtgagggcggatatgtcggcggcgccgataccccgcgagtgggtggggctgcagcagtttccggcggctacccagaccaagctgcacgagctcctcggcaagctcaaggaggaggtattacacgcctatgcaaacgcttcttttatggactggttaatggattggcgatgattatatatatcccgctcttgttttacgttgttagtaactggtggtaattgtgtgttttgttactccgtctgtgatgtgattgtatgttttactgctttgtttgtgatgaagaatgtgagcacattgacaattctggtgatggggaagggcggggtggggaagtcatccaccgtcaactccatcgttggcgagagggtcgctactgtcagcgccttccaggtaatgcttcttccaggtctgatttctattgagcccataaccgaagttgcgtacttatgggtgtgttgatgaatgttttcctgtacagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttgaacattattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgagatcataaaaaggtaccaatcttgagttatagcgatacttgtctttaatcaatacagttgcttgcatgtaccacaacatcttgtttaggatttgagatggtactataaccatactaaggttgccattttgacctagggtcaagggcggatcgatctgtagtatattttcttggaattaggagcttttatgtactgaaatcggcatcatatttatgggcgacacatctcagaaacattgttttagtttgtgtttccactttgccatcctgtggtgtaagaacgagacaggaggtgattttatattattcttgattttacaaacagaatctagggtgctgtctgaagagtcttgatccaatattcatgttaaactgtttttttgtgcactatactcacattactctgaagataacctgttggctttgtaattttgttatttttttaatatttgtatgattttctggatattccagtttctgtaaggctcccatcagatggcctaataagccaaagaaaaagccaaaatttgaattttcaagcttaattttgagattgattttgagatattttcaacgtagtttctttttcaacattggcttttaagtcacaaagaacacatttataaaagttttacccacaaattcatttttatttcctaataagccgttttggcttattaggaaataagccaaacgatggggacctaagggtataatagtctctaggagcaaaccctgatggttgattggttaactactgttgactgcacatcaatgcaaaagggaaatggatgactagtaatggaggcgaaaaatagaagtgcaactcacaatgttagagagagtgaatcaggttgcaaggagtgacaaaaggaaaattctcttaattattaacaataactattatgaatcaacacaacttttctttaggttgctgctcataaatttgaccttcgcgaagttttcattatgctgtcttcaaaagttctattcctatacaagtcatatgtgttatctactgtatcgcaggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattggatgcatacagaatggacacgttggatgatcaagttattagagctgtcaccaattcatttggaaaggccatttggcgaagaacattggttgtattaacacatgctcagctctcaccacctgatggacttgactataacgatttctttacaaaaagatctgagtcacttttgcgatacattcgtgctggtgcaggagtcagcaaacgagaacttggggtaatgtatacctcacttgtcttttatatgggtattatcggcatatcaagattttttttttttttttgcaatttatctgcagcttcctctgtctaaactaatattttttcttcatgtgtattatttgacatgctctttcagaacaattattcattttctgtcctgtgttgttgctgtttctttgctgatctggaataatagaacacatagtaatctgtcatttcccttctccttgggtctatttattttgctgtgtaactaacacactctcttcagttcatctgtaggttatgtatttatgtgttaatattattctatgaatcaaattatcttttgaagtcactgattttgcatgctaaccgacgtccaatgtttttttaccttgaaatttagtattcatgttatgaacctgaacctccgcttgttttggttacttatagtgtctcagtcaatgatactccctcatgggtctactgttgcttcaaccttctgggttcttgagtggctagctttaaattgtacactttcttatgtttccaacttgtctgtttgcaaaatgctacaacaatatggctgtttgggtgctaagtttctggggaaacgtggtactttccagtttgcactctccaacacgagatatgcatatgtcacattgcatatggcaagtatacaaaattacagatggagttgaactctgcagaaaaaagaaaattctcatcactagctaaatgtgcatcagtcttaggttacacaaacatctttttctccaacctgcctttttgctttctggcatgctctcagctaaatgtatatggtgcatcactcttaggttacacaaacatctttttctccaacctgcctttttgctttctggcatgctctttcattgcaaatggttgcagaattaacctgaactttttatttctctgtgtactacagaatctgtttggaaatatattatttcctcaggtgtcacaaacagttgtgcttttaaaatctatagtcctttttctatactaatgttaattgtaataacattctgctccttttaggattttcccttgccaattgcattggtggagaacagtggaaggtgcaaaactaatgagaatggagagaaggtttgactatctcatcatcatgtttggcttgtatttgaacatgtctagcttctaggtaattgaggatgccatacaactgtatcacaggttctccctgatggaactccatggattccgaacttgatgaaagagattactactgttgtctcaaacgggagcaaatccattcatgttgatcaaaagctaatagatggtccaaatcccaacaatcgctggaagatgttcataccgctcatccttatggtggaggttagctcctttaaaacaaaacagttctaaatctaagcacagcattttcatcttttgcctcaacataatgcctcacttatgtttaccatgctcttctccagtactttttggttgtaaaaggcatccgaagggccattcatgctgacatatcaaacgggaagctagatgactgggaacagcgttacagagacttggttggaagcaaggacccggtagaccagaaaggttcatcatccggcaaccgcaaggcttgagctgaagaatgataccgcatgcatcgtgacccattcaattctctgtgcttttctttttgcgctctattccagtgatctatttgggaagctttatagagttatctgggacaatttgagcaaatttgctcttgtttttagttgctaaaaaaactgtactgaatttttttgtgctgtcgcaattttgcaaatgttgttgatcgaaacttcagttatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0240500, RefSeq:Os03g0240500