Difference between revisions of "Os03g0254700"
(Created page with "{{JaponicaGene|
GeneName = Os03g0254700|
Description = Lissencephaly type-1-like homology motif domain containing protein|
Version = NM_001056122.1 GI:115451972 GeneID:4332...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0254700| | GeneName = Os03g0254700| | ||
Revision as of 19:32, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0254700 |
|---|---|
| Description |
Lissencephaly type-1-like homology motif domain containing protein |
| Version |
NM_001056122.1 GI:115451972 GeneID:4332285 |
| Length |
9055 bp |
| Definition |
Oryza sativa Japonica Group Os03g0254700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:8216504..8225558 |
| Sequence Coding Region |
8217176..8217383,8217940..8218106,8218182..8218370,8218453..8218548,8218639..8218767 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:8216504..8225558 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:8216504..8225558 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgtcgctgagccgggagctggtattcctcatcctgcagttcctcgatgaggagaagttcaaggagactgttcacaagcttgagcaggagtctgggttctacttcaacatgaagtacttcgaagacgaggtgatcaatgggaattgggatgaggttgagcgctacctcggtggctttaccaaggttgatgacaaccgctactcgatgaagatattctttgagatccgcaaacagaagtatcttgaggcccttgataagcatgatcgttcgaaggcggttgaaatcttggtcaaggacctgaaggtcttcgcgtcctttaacgaggagttgtttaaggagatcacacagcttttgacgttggaaaactttagggaaaatgagcaactctccaaatacggtgatacaaaatctgccagagcaataatgcttgttgaactaaagaagctgattgaagctaatcccttgttccgtgacaagcttcagtttccaaatctgaagagctccagattgcggacacttataaaccagagcttaaactggcagcaccagctttgcaaaaatcctagacctaaccctgatatcaagactctgtttgttgatcattcttgtggacaaccaaatggtgctcgtgctccatcgccagcaaacaatccattacttggatctataccaaaacctggaggtttccccccattgggtgctcacgcgccatttcaacctgcacctacacctgtcccacctctggctggctggatgtcaaaccctccagcagtaacacatcctgctgtgtctggtggagctattggatttggtactcctacaaatcctgctgctatattaaaacatcctagaacaccaacaactgccaatccttctatggattatccatcaggagattctgatcacgtctccaagagaacgagaccagttgggatgtctgaggaggtgaatcttccagtgaatatgttacctgtgacatatccacagagtcatagttacccgcaagatgattttcataaaaatgttgcacggacattgagccaaggatcaactccaatgagcatggacttccatccagttcagcaaactctccttcttgttggtaccaatgttggtgacattggattatgggatgtcggtaccaaggaacgacttgttttaagaaacttcaaggtttgggatcttacaaaatgctcaatggccctccaggcatcacttgtcaaagaccctactgtctcagttaaccgcataatatggagtcctgatggaaccttgtttggtgttgcttattcaaggcatattgtacagatctattcataccatggcggtgatgatatcaggcagcacttggagattgatgcgcatgtcggtggtgtaaatgacattgcatttgcccatccaaataagcagctatgtataataacctgcggagatgacaagacaattaaggtctgggaggccactagtggagcaaagcaatttacatttgaaggtcatgaagctcctgtttactctgtttgtccacattataaggaaaatattcagttcatcttctcaactgctttggatggaaagataaaggcttggctatatgataatttgggatccagagttgactatgatgcgccaggacattggtgcacaacaatggcatatagtgcagatggttcaaggttattttcttgtgggactagcaaggatggcgaatcacatctagtggaatggaatgaaagtgaaggagctgtcaagagaacttaccagggatttcgcaagcgatcgatgggtgttgtccaatttgataccacacggaacaggtttttggctgctggagatgaattcttgattaagatatgggacatggacaacacaagtcttctgactaccattgatgccgatggtggtcttcctgcaagtccacgggtccgattcaacaaggaaggtactctgctggctgtttctacccatgaaaatggtatcaagatcttagcaaatgctgatggagtacggttgctgcgcacattggaaaatcgttcatttgatgcttctcggagtgcgtctgagactgtaacaaagcccctaatgaatccattgactgctgctgctgctgcggcggcgtcagctgctgctgccgggactagttcaggaaatgctgctccaccggcaataactgcactgaatggggatagccgaagcttggttgatgtaaagcctagaatagctgatgagccattggataaatcaaaagtctggaaacttatggagataaccgagtcaagtcagtgcagatcattgaaattaacagataatatgaggacaagcaagatttcaagacttatttacacaaattctggtgtcgctatcttggctttagcttcaaatgctgttcatctgctctggaaatggcctcgcaatgaccgaaactcaagtggaaaggctactgcaagtgtttctcctcaattatggcaacctccaagcggcatcctcatgactaatgacataactgacaaccctgaagaagctgtccattgctttgctttgtcaaagaatgattcatatgtcatgtctgcatctggagggaaaatatctctgttcaacatgatgacttttaagacgatgacaacttttatgcctccgccgccggcggcaacgtttcttgctttccatcctcaagataacaacattatagcaattggaatggatgactcaaccatccaaatctacaatgttcgaattgatgaggtcaaaagcaaacttcgagggcactctaagaaaattactggacttgctttttcaaatgtattaaatgtgttagtctcttctggagctgatgcgcagatatgtgtgtggagcacagatgggtgggataaattaaagagcagaatgttacagataccatcaagtcgtccatcatctataatcttagacacacgtgttcagttccatcaggatcaattgcactttcttgttgtgcatgagacccagattgccatatatgaaactacaaaattagaacccgtgaagcagtggcctgtccgggagaactcttctccaataacgcatgccatgttctcctgcgatagtcaattgatttatgcaagctttctggatgccactgtttgcatatttaatgcatcgagtttgagactccaatgtcgaattcttccagcatcctatcttcctcagaatatcagctcaaatgtttatcctgtcgttgtggcggcacatccttcggaagcaaatcagtttgctctaggcctgactgatggtggtgtttatgtattggaacccttggaatctgagagaaaatggggaaatcctccaccagcagagaatggatcaaccagcgctttgtccacacctcctaatggagcatcaagttctgatcaaccagaaagataa</cdnaseq> |
| Protein Sequence |
<aaseq>MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFYFNMKYFEDE VINGNWDEVERYLGGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLK VFASFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDK LQFPNLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANN PLLGSIPKPGGFPPLGAHAPFQPAPTPVPPLAGWMSNPPAVTHPAVSGGAIGFGTPTN PAAILKHPRTPTTANPSMDYPSGDSDHVSKRTRPVGMSEEVNLPVNMLPVTYPQSHSY PQDDFHKNVARTLSQGSTPMSMDFHPVQQTLLLVGTNVGDIGLWDVGTKERLVLRNFK VWDLTKCSMALQASLVKDPTVSVNRIIWSPDGTLFGVAYSRHIVQIYSYHGGDDIRQH LEIDAHVGGVNDIAFAHPNKQLCIITCGDDKTIKVWEATSGAKQFTFEGHEAPVYSVC PHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGHWCTTMAYSADGSRLFSCGTS KDGESHLVEWNESEGAVKRTYQGFRKRSMGVVQFDTTRNRFLAAGDEFLIKIWDMDNT SLLTTIDADGGLPASPRVRFNKEGTLLAVSTHENGIKILANADGVRLLRTLENRSFDA SRSASETVTKPLMNPLTAAAAAAASAAAAGTSSGNAAPPAITALNGDSRSLVDVKPRI ADEPLDKSKVWKLMEITESSQCRSLKLTDNMRTSKISRLIYTNSGVAILALASNAVHL LWKWPRNDRNSSGKATASVSPQLWQPPSGILMTNDITDNPEEAVHCFALSKNDSYVMS ASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRIDE VKSKLRGHSKKITGLAFSNVLNVLVSSGADAQICVWSTDGWDKLKSRMLQIPSSRPSS IILDTRVQFHQDQLHFLVVHETQIAIYETTKLEPVKQWPVRENSSPITHAMFSCDSQL IYASFLDATVCIFNASSLRLQCRILPASYLPQNISSNVYPVVVAAHPSEANQFALGLT DGGVYVLEPLESERKWGNPPPAENGSTSALSTPPNGASSSDQPER</aaseq> |
| Gene Sequence |
<dnaseqindica>8176..8383#7453..7619#7189..7377#7011..7106#6792..6920#6543..6719#6300..6410#4928..5074#4721..4822#4480..4644#4139..4373#3921..4048#3738..3833#3554..3649#3341..3414#3204..3273#3001..3110#2760..2913#2511..2626#2287..2407#2025..2202#1177..1335#934..1047#666..845#489..568#gttgacttaccatactacccctcgctcagtctcatcctcctccaggctcgccctcgttcctctctctctctcctcgcaaagcgatcgaggcaaatccggagccgccgccgggccctcgatcttcgccggcggccgcccccacctccgtcgacgagcgaagcggcgccgcctctcccttctaccgggccgacgtggagctgagcggagcggcggggaggggggggggggtggggaggggggtgaggggagatccacgcgagctgatctcttccgtggtggtaaagccctaactcgctcggatccatttcgcgctgattcgtgtcgctgaagccctaaccggccttcttgttctccttcttccgcagtgtgcgccgtgcgggacggggtcgggtcgttttctgtgacctgtagaatagggtagggtttgaggcttttgagcagaggcgcatccgccgcgtgggtgggtgggtgcggcggtggaggggaggatgtcgtcgctgagccgggagctggtattcctcatcctgcagttcctcgatgaggagaagttcaaggagactgttcacaagtgagtgtttcaatctaggctgaaaaaaagggtgaaattatcacatgtctgtctagcgtttgtttaactcagttggggttccggcgctgttgttcaggcttgagcaggagtctgggttctacttcaacatgaagtacttcgaagacgaggtgatcaatgggaattgggatgaggttgagcgctacctcggtggctttaccaaggttgatgacaaccgctactcgatgaagatattctttgagatccgcaaacagaagtatcttgaggcccttgataagtaagtatgggagggaacatgtccctacaggaattttaggtgctggagtggaaagcgttgctaactgggtttgtttgctgctctgcaggcatgatcgttcgaaggcggttgaaatcttggtcaaggacctgaaggtcttcgcgtcctttaacgaggagttgtttaaggagatcacacagcttttgacgttggaaaactttaggtatgaatgtaatgtaccaaaatggtggtctgacactttatttatgtacattagagcatggccattaattttgtggctgtaactattacttggttgctcagtctatggttttttattttgtcttgatagggaaaatgagcaactctccaaatacggtgatacaaaatctgccagagcaataatgcttgttgaactaaagaagctgattgaagctaatcccttgttccgtgacaagcttcagtttccaaatctgaagagctccagattgcggacacttataaaccagaggtagcacatgatggagaaacacggcttccccttacattcaatcatctggaattttgtttcttgcaatacagctggttacataagtacatctcatgagaggactttaactcatgtcagctcctgacagttccagtgataatgttatagtttataagccaactactttgttccacaggacccacaatttttttctcaagtttatttaaatcactgcttcttgtttagcaaagataacctgctatatttagcttgaactaaatgagcaatacggctcatttatgacactcatcctaatgaagatttctttttatgacatatgtggtataaataccaagttttaaatcttctgttgcattattcattttctgggatattggatagacatatagagcttgaagttgaaaacggaaaattatctaatgatttactcacgtcacacaccattgtgtggtttatctgtactgttttctttatatgttgcgaattacttatcactatttattatctgtaagatttggctgtctacttggtaggttgtcagaactcagaattagtgcttgctgattctaagttctagggataacttcacagcaccatgctgtatacttttgatttatcatatgtttaaaatttttaatgtggaggagggataatgcatggacctttgacttttttataatatgttgcagcttaaactggcagcaccagctttgcaaaaatcctagacctaaccctgatatcaagactctgtttgttgatcattcttgtggacaaccaaatggtgctcgtgctccatcgccagcaaacaatccattacttggatctataccaaaacctggaggtttccccccattgggtgctcacgcggtaagtccttttagcatatttggatgcttcatgtttatgtgaaggacacggttgttttgaaatcggttccattccctttttcagccatttcaacctgcacctacacctgtcccacctctggctggctggatgtcaaaccctccagcagtaacacatcctgctgtgtctggtggagctattggatttggtactcctacaaatcctggtacctgttctaattactgttacaaactattattaagtggtctaaattggaaacagcacacatagtctgttgattcatggcattcttcttttaaatcttgtagctgctatattaaaacatcctagaacaccaacaactgccaatccttctatggattatccatcaggagattctgatcacgtctccaagagaacgagaccagttgggatgtctgaggaggtatttgtcacatctctttgaaatacattttgctatttctagtgtacgctgacactttataataccattgcattttgcctaatcattattgacatatatacttgattgtaactataatgatctaattttgcaggtgaatcttccagtgaatatgttacctgtgacatatccacagagtcatagttacccgcaagatgattttcataaaaatgttgcacggacattgagccaaggatcaactccaatgagcatggacttccatccagttcagcaaactctccttcttggtcagttcttaaattcttgttgctttctcatgataaatcaaattttgccccttccatagcttctcatatacactgcttatattttagttggtaccaatgttggtgacattggattatgggatgtcggtaccaaggaacgacttgttttaagaaacttcaaggtttgggatcttacaaaatgctcaatggccctccaggtttgtccgttatactatgttatttgagtttttgttgctctttattagcctcaatctaactatgaccatgtaaaattgtaaattcttcaataggcatcacttgtcaaagaccctactgtctcagttaaccgcataatatggagtcctgatggaaccttgtttggtaagatgatgtggacttgtgccttttctatcctctacccacagtttctaatgtctctttttaacaggtgttgcttattcaaggcatattgtacagatctattcataccatggcggtgatgatatcaggcagcacttggaggtatgaatgcatattcgttgttcttctttccttttttgttttgacaggaagttcttccttcctaattggtattagtttcttattgtataatcgtctaatctgattcctgaatttgattaatccctcctttcttaactagattgatgcgcatgtcggtggtgtaaatgacattgcatttgcccatccaaataagcagctatgtataataacctgcggagatgacaagacaattaaggtgagtttctgtgattgcatgagttctgggactgaaagtctctttgtttaacccagaagtgctaagttttatgggcaccatattctaggtctgggaggccactagtggagcaaagcaatttacatttgaaggtcatgaagctcctgtttactctgtttgtccacattataaggaaaatattcaggtgcacctgcagtttttatgctataacgatcaatattaactattggaggctacttttccttacctgttgttatttttcttcgtgcagttcatcttctcaactgctttggatggaaagataaaggcttggctatatgataatttgggatccagagttgactatgatgcgccaggacattggtgcacaacaatggcatatagtgcagatggttcaaggttcataattatttctttgttagcatgattcatgtgggtaactgggtttttgtctttgttttcactgattctttttgcccttgtgagtaggttattttcttgtgggactagcaaggatggcgaatcacatctagtggaatggaatgaaagtgaaggagctgtcaagagaacttaccagggatttcgcaagcgatcgatgggtgttgtccaatttgataccacacggaacaggtttttggctgctggagatgaattcttgattaagatatgggacatggacaacacaagtcttctgactaccattgatgccgatggtggtcttcctgtgagtgttttcctttatctgtagatactttggtaaatggtgattggttcaaatgaaatgagtaaggaaatttccatcttaatctaacctagcatgcaattattaggcaagtccacgggtccgattcaacaaggaaggtactctgctggctgtttctacccatgaaaatggtatcaagatcttagcaaatgctgatggagtacggttgctgcgcacattggaaaatcgttcatttgatgcttctcggagtgcgtctgagactgtaacaaaggtaagttcttgtgaccatttaaaattacaactaaatatttttgcaagcttgacccaatagatccatcttggtgcagcccctaatgaatccattgactgctgctgctgctgcggcggcgtcagctgctgctgccgggactagttcaggaaatgctgctccaccggcaataactgcactggtttgaccatattcacaattccttttctattgatctttctctttctatcagaaaaccttctatagtgacccaactaacttgtacattcttggaaaaattctacagaatggggatagccgaagcttggttgatgtaaagcctagaatagctgatgagccattggataaatcaaaagtctggaaacttatggagataaccgagtcaagtcagtgcagatcattgaaattaacagataatatgaggacaagcaaggtgatattttatccctcttgttgcaatctgcagtataactgtctcagtggttctataaaattaatactttgtagtacattattaagtaattttttaggctgagttctttcctctcctttcccaactcatctccctctttttccgtgcacacgcttttcaaactattaaacggtgcattttttttacaaaagttttcaataggaaagttgcttcaaaaaatcatattaatccattttttttaaaaagctaatacttaattaatcatacgctaatgagctgctttgttttgcgtgcaccaaggattagttcccaactgtgtctgccgaacacagccttagtgtgtatagaacaaacaccatatgttttgacaagtttccatagctaatattatttgatttattgcagagtaggggtgggcataaaaacaccgaaaaccgtagaccgaaccgaaccgagccgaattggtggtttcttcggtcttcggctgcttgcttgctcggtttgattttttacatcatttggtgtgcggttttttcttcagtcttcatctgccataaaccgaactaccgagaaaaccgatctgtgtgtgtctccctcctggcccaactacacaaggcccattaacttttccccatatccctaatttgtgcgtggggtcgtgtgggattcgtgtggtcgtgctgctcgccgtcgcggccgagtgcagcaggggttggcgactagcgctcctggagcttgtgctggacgattaagcagctttggtgattagtggttggacggtggaagatcagaggcatgtcgtcatcatcgagcgagctccatggctgcgtgtgcgtaggtcctcgttgagcgcggcattcttcggtaaaaaccgaaagctgataaacccgaactgacattaatcagttttggaaagctcagtttttatttttccatagctaccgtcggttagtattttacataaaccgagttatataaaaaacctaaaagaccgaccctattaaaccgaaaaaccgagtgcccacccctattgcagagtatgattgttaattgaactaaagccactgactgtttccgtgaatgatgcttgcccaatagaatgaaatgttttgtcacctcatattttgactagcattcttgagattcttctgatccacatccaagtaccaactgctggtttttatctgtaagggtttccatagatcttatttgttttgaactgcagatttcaagacttatttacacaaattctggtgtcgctatcttggctttagcttcaaatgctgttcatctgctctggaaatggcctcgcaatgaccgaaactcaagtggaaaggttaaatctggattatttacgcacataaatatgctcagttttacctacctgctctgtataccaggtccaggggcaagcaatttgtgcatatgattgttactaactttttatgtttgctattgactcttctaggctactgcaagtgtttctcctcaattatggcaacctccaagcggcatcctcatgactaatgacataactgacaaccctgaagaagctgtccattgctttgctttgtcaaagaatgattcatatgtcatgtctgcatctggagggaaaatatctctgttcaacatgatgacttttaaggttagttacaagtttatttctattgtttgtctcttatgtagaaattgaactttaatcatatggtgactgcagacgatgacaacttttatgcctccgccgccggcggcaacgtttcttgctttccatcctcaagataacaacattatagcaattggaatggatgactcaaccatccaaatctacaatgttcgaattgatgaggtattagcacatctaatggcattgctctgcgttattcttataaaaaatggaacaagattcaatcaattttttttttgattctttgcacaggtcaaaagcaaacttcgagggcactctaagaaaattactggacttgctttttcaaatgtattaaatgtgttagtctcttctggagctgatgcgcaggttatttactgaactatcaactcacaccatagagcaagccacttctgtttgtctttactgtttatacttttcctccttgtagatatgtgtgtggagcacagatgggtgggataaattaaagagcagaatgttacagataccatcaagtcgtccatcatctataatcttagacacacgtgttcagttccatcaggatcaattgcactttcttgttgtgcatgagacccagattgccatatatgaaactacaaaattagaacccgtgaagcaggtaaattctctcttcacgtgcagttcaagttaactacaaaggctatttcattactcaccttaactttactttcagtggcctgtccgggagaactcttctccaataacgcatgccatgttctcctgcgatagtcaattgatttatgcaagctttctggatgccactgtttgcatatttaatgcatcgagtttgagactccaatgtcgaattcttccagcatcctatcttcctcagaatatcaggtattctacaaaaactcaacaggacacaatatatcctttatatattctaacttactggattaaattggtactcttgcttctgaaaacattttgtcttgctgttctcaatcaatctcattagtttagtcagtgcactagcatattatgctaagaaactaagaaaatatagagtcgaggtaattgaaaacagtacttggggtatcaactacgaacacacatagacagaatagctgcaataaatcactaagactaattggactttgatgaaatttaccttaagcaaccagatctttacaataaatagttgtgtcaaccaatcctaggggatgagagatgtcgtaattatctttcaatttttttggcttatttttcacatttgattggctaatatatttattgagtgcattaatacatgtccaatgggactgctgaactgaaaaagaagtttttggaggaaaagtgcatattatctttgtttgctcagccaatgtttcttttgttcaaacttatttttaacagacaagttattaaccattatatgttccttgtttcctagctcaaatgtttatcctgtcgttgtggcggcacatccttcggaagcaaatcagtttgctctaggcctgactgatggtggtgtttatgtattggaacccttggaatctgagagaaaatggggaaatcctccaccagcagagaatggatcaaccagcgctttgtccacacctcctaatggagcatcaagttctgatcaaccagaaagataatgatgaggagtttgaagtgttacattttttgtacttgcacggtacaaattcactaaccaaggtatccttcttacaagttaattcaccgggccttcttacaaagttaacaaaagcaacaaaagtcacatattcgctgctctgttgagacatgatatatagaacaatcataatgcatcacttgcaatgattagtgtgataaatttaccactccatgattagtttgattaatttaccacaaaaatatctactggattcctgagaagtgtttttgcacgcatgaagaataatatatgttctccttttctttagttgaggatgcacacattttggttgacattagctgatatccaaacctcacctttttcagcctgacccctcttttattatgcagacgatgcacttcactcttacagcttcccttccgtagagctggttccaaggggtagtcgatgaacggacggaataaaaagacaagcttaacagcagttcatttgttgcttatatgtctcactgttatctgtattaagtgagggaagagttagtcctagtatttaattttgctgtctgtcgtgctgtgaaaaaagatgtttgcaagtagcttaagctgtagcaacaatttgtctgaacttattatcaccttttattcacaactagaaagtaaattgctgctcc</dnaseqindica> 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