Difference between revisions of "Os03g0267800"

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(Created page with "{{JaponicaGene| GeneName = Os03g0267800| Description = LIM, zinc-binding domain containing protein| Version = NM_001056203.1 GI:115452134 GeneID:4332368| Length = 5210 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0267800|
 
GeneName = Os03g0267800|

Revision as of 19:32, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0267800

Description

LIM, zinc-binding domain containing protein

Version

NM_001056203.1 GI:115452134 GeneID:4332368

Length

5210 bp

Definition

Oryza sativa Japonica Group Os03g0267800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8920855..8926064

Sequence Coding Region

8921132..8921469,8921564..8921622,8921723..8921838,8922133..8922195,8922381..8922593
,8922766..8922885,8923008..8923091,8923184..8923304,8923385..8923517
,8923609..8923693,8923860..8923993,8925853..8925892

Expression

GEO Profiles:Os03g0267800

Genome Context

<gbrowseImage1> name=NC_008396:8920855..8926064 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8920855..8926064 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctactcctcacggtcttgtgatcagtgcagtcacgagaggagatccggcttcatgaagtggctctgcgctttcctgaaggggacgaaggacggcgaggccaaccgacggcgccctcgggtgacggcaggagaagagaccacgctctgggaagaaccagttagaccaaagaaggaagaaccacctagacataacaatgaagaaatggaccatgcacttgcccttgctcttgcagacgatgccaaaaatacaaaagagagaaaccatgacaagggagaaaacgatgaagaactcgctagagcaatacaggacagtctgaacatgaatccttaccagccttacaatccttgtgcaccctctcagacccaggccaggtcgagaggatacagggtctgtgggggttgcaagcatgagatagggcatggccattacttgagctgcttgggaatgtactggcaccctcagtgcttccgctgttcttcctgtcgccaccctatccgtgagatggagttcaccttgctaggtacagatccataccacaagctgtgctacaaggagcttcatcacccaaagtgtgacgtctgccttcaatttatcccaacgaacaggactggtttgatagagtacagagcccatccattctggggacagaagtattgtcctttgcatgagcatgatagaacacctcgttgctgtagctgtgagaaaatggagccaaggaacacaaagtatatgtcattaggggatggacgcagcttgtgcatggaatgcctggattctgcaatcatggacaccggtgaatgtcaaccgctataccattccatcagagactactacgaagggatgaacatgaaactagaccagcagatacccatgctcttggttgaacgtcaagcccttaatgaagctatggaaggagaaagcaaaggaccgcatcatatgcctgaaacacgaggcctttgtctgtcagaggagcagactgtgaccagtatacttaggaggcccagaattggtgcaaatcggttactagatatgaaaacccaaccgcaaaagctaactaggagatgcgaagtcactgcaattcttgtattgtttggcctccccaggctgctaacgggctccattcttgcccatgaattgatgcatgggtggttgcgcctcaaaggttaccggaacctaaaggcggagattgaggaaggtatatgccaggtcatgtcttacctgtggctggagtcagagatccttccatccacttcaagatatggacaggcttcaacatcttacgcttcatcttcgtcgtcctcctgtcgaccaccaccgtccaagaagggtgggatctctcacaccgagaagaagcttggagaattcttcctgcatcagatcgccaatgacacatcatcagcatacggcgatggtttcagagctgcctatgcagctgtgaacaagtatggccttcgccaatcactgaaccatatacggctaaccggaggctttcctgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAYSSRSCDQCSHERRSGFMKWLCAFLKGTKDGEANRRRPRVTA GEETTLWEEPVRPKKEEPPRHNNEEMDHALALALADDAKNTKERNHDKGENDEELARA IQDSLNMNPYQPYNPCAPSQTQARSRGYRVCGGCKHEIGHGHYLSCLGMYWHPQCFRC SSCRHPIREMEFTLLGTDPYHKLCYKELHHPKCDVCLQFIPTNRTGLIEYRAHPFWGQ KYCPLHEHDRTPRCCSCEKMEPRNTKYMSLGDGRSLCMECLDSAIMDTGECQPLYHSI RDYYEGMNMKLDQQIPMLLVERQALNEAMEGESKGPHHMPETRGLCLSEEQTVTSILR RPRIGANRLLDMKTQPQKLTRRCEVTAILVLFGLPRLLTGSILAHELMHGWLRLKGYR NLKAEIEEGICQVMSYLWLESEILPSTSRYGQASTSYASSSSSSCRPPPSKKGGISHT EKKLGEFFLHQIANDTSSAYGDGFRAAYAAVNKYGLRQSLNHIRLTGGFPV</aaseq>

Gene Sequence

<dnaseqindica>4596..4933#4443..4501#4227..4342#3870..3932#3472..3684#3180..3299#2974..3057#2761..2881#2548..2680#2372..2456#2072..2205#173..212#gatcctctgctcatcgtagaaatcgcgatcgccatacttgaccttgcagagctctgtctctgtctctcgctctgattgaagtgttctgctgccatctctctcccgcttctgtctccgtgtgtgcatatatatatgctgtattggggacgttgcggcagcggttcttgggtacatggcctactcctcacggtcttgtgatcagtgcagtcacggtaatttctctgatcctaatgttcagccgttgccatcgtcgtcctcctcgtactttttgacgttcttgttcatgttggacacatggttggtttgcttgtgcactatgggtagattagatttcacgtactttttcagcagcagagagctattgttttcatggcaccagtagctggtcgttgtctcttgcctgactaagattttaactttttatttgttgcctgcttgaaatatatgtgctgtcttgattgaacttcaaacaaggcaggctaaactactgtcggcagtgcaattaacgtcagatagactaaaacgaggttgatttcagcaagtaaagcaaaatgaacttttagctttcctaaagatgatactccggggaacacaaaaatggatcccagttgatccctttcagagaaaaaatttagcataccaatcgatcgatgcgtcaacatccatggcaaaatagccgattttttaggcgtttctttacacatgagactgttatccgttagactcgccacatcatgtccactctctctgaaagaacgttcttgttgccattaggctgtcctattctaagggcttgtttgtgaaacagggacttctgtcacatcggatgtttggacattaatttagagtattaaacatacactaattacaaaacccattccataatcttggactaattcgcgagacgaatcttttgagtctaattacgctatgatttgacaatgtgatgctacagtaaacttttcataattatggattaattaggcttaaaaaatttgtctcgcagattagctctcatttatgaaattagttttttattagtctatgtttaatactttaaattagcatctaaacattcaatgtgacatggactagaaaattttagccccatctaaacattcatggcgtgagcgtggcgcaaatggtgatggtacaggtccatattattggtctagcttcgaatcgacctttagctgtttgatcctaacatcgatcgccgtgcaatcacatcagatgaacatttctaactgtcatgcataaatcataccactgtgctattcagaggagggaaattaaggcaccgtttagataataggaaagggaaataatttcccacttatgaaggggtaactttgaatcctagccattcatttcctccaccttatttcatcctagccattgattcattttctaatcccaatcccatcctttatttcctattatccaaacatagcataaatgggagactcaaactgattcttataatccaggataaatttgagggccaccaagatttgactgaccctgactgcgcctgcgtgccccgtcaatcggaggtagaattgaaaaaggaaaagaagataacgctgtgattagcacggtgtagagaggggccatgttagcaacgcaagcaatttcgtgtggcgttttgtccctgtgtttcttgatcttgttcaatgcaggtacacgcatctgcctttctttttctatgacagtccaattaacagcctcatacaaacaaaaacttaaaaatttagtttagctgtacatgacatgatgactgatttttttttaactgtgcaactgtgactatctgatcaaagcaaagggctagcgaaattatgttgttgataacccatcacctaatccacttacaattagcatccaaccgagcatataagacaaccaaagtgtttaaatacatcaatttttctttgcctgctttcagcgggcaggaagtgttaggtgggatgttgctctccacatttcagttctagccatgtctgagatccttctttgcatagtgcctgaagccctgaacctgtccggttctaacatttctgcaacgcagagaggagatccggcttcatgaagtggctctgcgctttcctgaaggggacgaaggacggcgaggccaaccgacggcgccctcgggtgacggcaggagaagagaccacgctctgggaagaaccagttagaccaaaggtaatgtttctcaattcctccgcaacctgacatttttctgttcttttctttggttcatggagtgccactatccaaattccccttcctttatcagttagattatggtaatgatgtagcactatcatggggaaaagagtttctgaacctttctttgttatgtttctagaaggaagaaccacctagacataacaatgaagaaatggaccatgcacttgcccttgctcttgcagacgatgccaaaaatacaaaaggtgccatatttgtgaattctgtgatattatgatcatatatttttaacctatctcttcactaagcaccattgatgcaactttttttgggtagagagaaaccatgacaagggagaaaacgatgaagaactcgctagagcaatacaggacagtctgaacatgaatccttaccagccttacaatccttgtgcaccctctcagacccaggccaggtcgagaggatacaggttagcaaatctgctttcactaacctgtctacaattcacagaaacagctggtatgtaaagaagcaatatatatctttcagggtctgtgggggttgcaagcatgagatagggcatggccattacttgagctgcttgggaatgtactggcaccctcagtgcttccgctgttcttcctgtcgccaccctatccgtgagatggaggtaacctttctgcaattcagtttagaatgtctgaaggtgtgtgtgttcaggtgttctcaggaagtgacagtttactttattctgtttcccagttcaccttgctaggtacagatccataccacaagctgtgctacaaggagcttcatcacccaaagtgtgacgtctgccttcaatttgtaagatttttttttttgtggatgaactatttgcagaagtgctagaactgatttttggattagcatgccgttggaacagcatttgcaggaaaccctttttacgtgtttggtttttattgcagatcccaacgaacaggactggtttgatagagtacagagcccatccattctggggacagaagtattgtcctttgcatgagcatgatagaacacctcgttgctgtagctgtgagaaaatggaggtttgtactgcctttcttgcatatgatgaatgtatttcatgcttacaaatacacattaaaaatattattagtttctctattttctcggcaaaatttctataaattgcaattgtactgatttgtcagtttaaaatatgagttcgtacttaagacattttgtgaatccctgcagccaaggaacacaaagtatatgtcattaggggatggacgcagcttgtgcatggaatgcctggattctgcaatcatggacaccggtgaatgtcaaccgctataccattccatcagagactactacgaagggatgaacatgaaactagaccagcagatacccatgctcttggttgaacgtcaagcccttaatgaagctatggaaggagaaagcaaagtgggttctttacatctgtttgttctgtaatgcataatgcattactccgtctggtcataaatatttgatgtttaggataagatttaatcaaactttgaagtttgttcaaatcttgtcctaaacgtcaaatacctatgactggacggagtatgtgttattgatcattgcatcttgtatttctgcagggaccgcatcatatgcctgaaacacgaggcctttgtctgtcagaggagcagactgtgaccagtgtaagtacaacgcatgtcaacctaaacagtttttaggatggtacaatttctctaatgaataactaacaaatcaaggaagaccaagtggtaatatgaaatcaacatcgttctgatcaaacgatgagattctctgataaatactgatcatctaatgagattccctgttcaatgatgtagttgcaataaactagacagagtagttgctttcagatcttacatccacagttccactgagtagcaggttggccaaatgaaatcattgactttgttcctttgtgttctgattttctacagatacttaggaggcccagaattggtgcaaatcggttactagatatgaaaacccaaccgcaaaagctaactaggagatgcgaagtcactgcaattcttgtattgtttggcctccccaggtcagtgcattcttcacaagtatttccattttcatgtaaatcaaatgctacaattcgtgtatcatttgtgtgaagtcataaacattccatacaattgcaggctgctaacgggctccattcttgcccatgaattgatgcatgggtggttgcgcctcaaaggtaatcatctgaacatccatttctcccattttctgaaatcctatctgaacattaattaatttctttgtatcctgtctgacaatggcacctacaggttaccggaacctaaaggcggagattgaggaaggtatatgccaggtcatgtcttacctgtggctggagtcagagatccttccatccacttcaagatatggacaggcttcaacatcttacgcttcatcttcgtcgtcctcctgtcgaccaccaccgtccaagaagggtgggatctctcacaccgagaagaagcttggagaattcttcctgcatcagatcgccaatgacacatcatcagcatacggcgatggtttcagagctgcctatgcagctgtgaacaagtatggccttcgccaatcactgaaccatatacggctaaccggaggctttcctgtgtaacacaagaaagcactgtctatcagtctatgtccatactggatgcgggtatacagatatcatacacacatacatatggagatcatatgggttatggtaatggagtaagatttcggatttgggtgaccttgagttttcagagaggtcctatcagagtaaatcagttaaggaactgcatttgctcgaattaacaggagctgaggttgcaatctaataaggtgactaagaaacactaatgtaatgcacagtatggcccatgataatgcagtgaagtatttat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0267800, RefSeq:Os03g0267800