Difference between revisions of "Os03g0281600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0281600| Description = Similar to Ca2+-ATPase| Version = NM_001056279.1 GI:115452286 GeneID:4332447| Length = 4552 bp| Definition = Oryza ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0281600|
 
GeneName = Os03g0281600|

Revision as of 19:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0281600

Description

Similar to Ca2+-ATPase

Version

NM_001056279.1 GI:115452286 GeneID:4332447

Length

4552 bp

Definition

Oryza sativa Japonica Group Os03g0281600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9688205..9692756

Sequence Coding Region

9688205..9688356,9688459..9688568,9689455..9689832,9689937..9690215,9690601..9690725
,9690826..9690892,9691139..9692563

Expression

GEO Profiles:Os03g0281600

Genome Context

<gbrowseImage1> name=NC_008396:9688205..9692756 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9688205..9692756 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaagggcgggcaggaggagggcaagcggcgggacggatccgacgcatccgggtcggagccggccgcagcggccttcccggcgtgggcgcgcacgccgagcgagtgcctcgcggagctgggcgtcgcggcggaccgcgggctgtcctccgaggaggcggcggcgcggctgcggcggtacgggcccaacgagctggagcggcacgcggcgccgtcggtgtggaagctggtgctcgagcagttcgacgacacgctcgtgcgcatcctcctcgccgccgccgtggtgtcgttcgtgctcgcgctctacgacggtgcggagggcggcgaggtcggggcgaccgccttcgtggagcccctcgtcatcttcctcatcctgatagtgaacgccgtcgtcggagtctggcaggagagcaacgccgagaaggcgctcgaggcgctgaaggagatccagtccgagcacgcaaccgtcaagcgcgacggccggtggtcccatgggcttccggcgcgcgacctcgtccccggagacatcgtggagctccgtgttggcgacaaggtcccggcagacatgcgtgtgctccagcttatcagctccaccctccgtgtcgagcagggttccctcactggtgagactgcttcggttaacaagaccagccataaaatcgagctggaggacacagacatccagggaaaggagtgtatggtttttgctggcactacaattgtcaacggcagcgctgtctgtgttgtgacgggcactggaatggacactgaaataggcaagatccatgcccagatccaggaagcctcacaagaggaagatgacacgccactgaaaaagaagctcaatgagtttggggaggcactgacagccataattggggtgatctgtgccttggtttggcttatcaacgttaagtatttcctcacctgggagtatgtggatgggtggcccaggaattttaagttctcatttgagaagtgcacgtattactttgagattgcagtggcactggctgttgcagcaattccagagggcctgcctgctgttatcaccacatgcttggcgctcggcaccaggaagatggcacaaaagaatgcacttgtgaggaagttgccaagtgttgagacactgggttgcactacagtgatttgctccgataagacaggaacattgaccaccaaccagatgtcagcggtgaagcttgtggcaattgggaggtggcctgatacacttaggagctttaaggttgatggaaccacttatgatccaagtgacgggaagataaacgagtggccaagtttgagcatggatgaaaatctccagatgattgctaagattgctgcagtttgcaatgatgcaagtattgctcactctgagcatcagtatgttgccactgggatgcccacagaggctgctttgaaggttttggttgagaaaatgggccttcctggtggatatactccatccctggattcatctgatttgctaaggtgctgtcaatggtggaacaatgctgctaagagagtagctactctggagttcgatcggactagaaaatcaatgggagttattgtaaaaaaagcagactctggaaagaatttgctgcttgtcaagggagctgtagaaaatttgctagaaaggagtggctatattcagttgcttgatggatctgttgtgctcctggatgaaggtgccaaggcgctcatattatcaacacttcgtgaaatgtctgctagtgcattgcgatgtttgggttttgcgtacaaggaggatttggcggaatttgcaacatatgatggtgaagagcatgcagctcacaaatatctacttgatccttcatactactcttccatagagagtaatttgatattctgtggttttgttggtctaagggatcctccccgagaagaagtccacaaagcaattgaagactgtagagctgctggaatacgtgttatggtgattactggtgataacaaagaaacagcagaggcgatatgccgtgagattggagtttttggttccacggaagatattagttcaaagagcttcacagggaaggaattcatgtctctttcagataagaagaaactcttaaggcaaacaggtggccttctcttctctagggctgagccgaaacataagcaggagatagttagattgctcaaagaagatggtgaagtggttgctatgactggtgatggagtgaatgatgcaccagctctgaagttggctgacattggagttgctatgggcattacagggactgaggttgcaaaagaagcttcagatatggttcttgcagatgataacttcagtacaatagtcgcagctgttggtgaagggaggtcaatctacgacaatatgaaggcatttataagatatatgatctcttcaaacatcggggaagttgcttccatatttctaacgtcagctttaggtattcctgaaggtctcatccctgtgcaacttctgtgggtcaatcttgttacagatggtcctcctgcaacggctttggggttcaacccacctg</cdnaseq>

Protein Sequence

<aaseq>MGKGGQEEGKRRDGSDASGSEPAAAAFPAWARTPSECLAELGVA ADRGLSSEEAAARLRRYGPNELERHAAPSVWKLVLEQFDDTLVRILLAAAVVSFVLAL YDGAEGGEVGATAFVEPLVIFLILIVNAVVGVWQESNAEKALEALKEIQSEHATVKRD GRWSHGLPARDLVPGDIVELRVGDKVPADMRVLQLISSTLRVEQGSLTGETASVNKTS HKIELEDTDIQGKECMVFAGTTIVNGSAVCVVTGTGMDTEIGKIHAQIQEASQEEDDT PLKKKLNEFGEALTAIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEI AVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTL TTNQMSAVKLVAIGRWPDTLRSFKVDGTTYDPSDGKINEWPSLSMDENLQMIAKIAAV CNDASIAHSEHQYVATGMPTEAALKVLVEKMGLPGGYTPSLDSSDLLRCCQWWNNAAK RVATLEFDRTRKSMGVIVKKADSGKNLLLVKGAVENLLERSGYIQLLDGSVVLLDEGA KALILSTLREMSASALRCLGFAYKEDLAEFATYDGEEHAAHKYLLDPSYYSSIESNLI FCGFVGLRDPPREEVHKAIEDCRAAGIRVMVITGDNKETAEAICREIGVFGSTEDISS KSFTGKEFMSLSDKKKLLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVAMTGDGVNDA PALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMI SSNIGEVASIFLTSALGIPEGLIPVQLLWVNLVTDGPPATALGFNPP</aaseq>

Gene Sequence

<dnaseqindica>4401..4552#4189..4298#2925..3302#2542..2820#2032..2156#1865..1931#194..1618#ggaagggagaaaaagcttctcctctcttccgcattgcgttgcgccaccaatctcctctccccatctcggcctcctcgccgccaccatccgcctctagggtttcggttccatgcgatctcgccgcggcggcggaagggaaccctaggtaggaggctctcctcttgttgagtttgaatctgaggttcgtgaaccaatgggcaagggcgggcaggaggagggcaagcggcgggacggatccgacgcatccgggtcggagccggccgcagcggccttcccggcgtgggcgcgcacgccgagcgagtgcctcgcggagctgggcgtcgcggcggaccgcgggctgtcctccgaggaggcggcggcgcggctgcggcggtacgggcccaacgagctggagcggcacgcggcgccgtcggtgtggaagctggtgctcgagcagttcgacgacacgctcgtgcgcatcctcctcgccgccgccgtggtgtcgttcgtgctcgcgctctacgacggtgcggagggcggcgaggtcggggcgaccgccttcgtggagcccctcgtcatcttcctcatcctgatagtgaacgccgtcgtcggagtctggcaggagagcaacgccgagaaggcgctcgaggcgctgaaggagatccagtccgagcacgcaaccgtcaagcgcgacggccggtggtcccatgggcttccggcgcgcgacctcgtccccggagacatcgtggagctccgtgttggcgacaaggtcccggcagacatgcgtgtgctccagcttatcagctccaccctccgtgtcgagcagggttccctcactggtgagactgcttcggttaacaagaccagccataaaatcgagctggaggacacagacatccagggaaaggagtgtatggtttttgctggcactacaattgtcaacggcagcgctgtctgtgttgtgacgggcactggaatggacactgaaataggcaagatccatgcccagatccaggaagcctcacaagaggaagatgacacgccactgaaaaagaagctcaatgagtttggggaggcactgacagccataattggggtgatctgtgccttggtttggcttatcaacgttaagtatttcctcacctgggagtatgtggatgggtggcccaggaattttaagttctcatttgagaagtgcacgtattactttgagattgcagtggcactggctgttgcagcaattccagagggcctgcctgctgttatcaccacatgcttggcgctcggcaccaggaagatggcacaaaagaatgcacttgtgaggaagttgccaagtgttgagacactgggttgcactacagtgatttgctccgataagacaggaacattgaccaccaaccagatgtcagcggtgaagcttgtggcaattgggaggtggcctgatacacttaggagctttaaggttgatggaaccacttatgatccaagtgacgggaagataaacgagtggccaagtttgagcatggatgaaaatctccagatgattgctaagattgctgcagtttgcaatgatgcaagtattgctcactctgagcatcagtatgttgccactgggatgcccacagaggctgctttgaaggtatggctcattagtgcaataaaatatgttctctatgttgcttcacctaatgatcatgtaatatctggaaagtgttaacggtgatgttttgcataacatagaacatagataaacacatgggaattacttctaatcatccatgtaacttattttgaagttcatatgtgtagaatccgtgccttttcaagttgcttacaattatttgattatttctattgttgaatgattgtgttatgtatgtggcaggttttggttgagaaaatgggccttcctggtggatatactccatccctggattcatctgatttgctaagtatgctgatttctgtgatttgtaaaatagaatctgtgagcattatttgcattctttttgaataatcctagactaacttgcacttttctattgttttaagggtgctgtcaatggtggaacaatgctgctaagagagtagctactctggagttcgatcggactagaaaatcaatgggagttattgtaaaaaaagcagactctggaaagaatttgctgcttgtcaaggtattctgaaccatttataattccattgtagaattatcgaatgtttctctatcataaatgacctagtggacaaccatacgcagcttactcctatttaattcttcataatactggaagcaacatagttgtggattgttatattccaactgcagcgcatccttttgtcctttctctcctggaataggctataggccttgtcttattgtcagttgtctttgccaatagtatcaatggctgttttccacttttgttcctttagttagcttggttgccttacttggtaacgaattctctgtgcttctgaattggcatgtgttatgttcttttatccattgcattttcttttacctgttaatgtattcatgttaagattggactcttgcagggagctgtagaaaatttgctagaaaggagtggctatattcagttgcttgatggatctgttgtgctcctggatgaaggtgccaaggcgctcatattatcaacacttcgtgaaatgtctgctagtgcattgcgatgtttgggttttgcgtacaaggaggatttggcggaatttgcaacatatgatggtgaagagcatgcagctcacaaatatctacttgatccttcatactactcttccatagagagtaatttgatattctgtggttttgttggtctaagggtgagaacatgttcttcatagaaattctccaactgtgactattcaataactatatgatttctgcatttcgaatctgtgcaacttttaacaatacactatgacaggatcctccccgagaagaagtccacaaagcaattgaagactgtagagctgctggaatacgtgttatggtgattactggtgataacaaagaaacagcagaggcgatatgccgtgagattggagtttttggttccacggaagatattagttcaaagagcttcacagggaaggaattcatgtctctttcagataagaagaaactcttaaggcaaacaggtggccttctcttctctagggctgagccgaaacataagcaggagatagttagattgctcaaagaagatggtgaagtggttgctatgactggtgatggagtgaatgatgcaccagctctgaagttggctgacattggagttgctatgggcattacagggactgaggtctgcttcttgctttgttattaaactgttccttttcttttatcttttatgagggtaattttgcaatttatatttttcatctcctttttacttgtcacctatcatacattctgagtggtagagcacattaggcttcactattctcatgtgatgtaaccattcttaggcttctgatcacattttttatagtttagctgtgctctttccgttactatttcttgctgccatctcattcattttttgcttcatcactagcctgttactaactttacccattggtcgttgttggtcgcttccctgctgagcatttcataagaactgcttaagatcacacgataattcttagatagtgaactataaattggattttctatttccttttaattttgtctccttattttttttatgcttcagaatttaccaaaagaatccatcgcatggtgttttcgtatctctttctatgttttatccgttccctttttgtatgattgtatactccctctgtcccaatataagtggaacctaagatagatgtgacatatcctaggactacaaatctggaggttgcacttatattgggatggagggagtatgttttataatggtcctggagtttttaccacagaatgcagggtatttatggtgtacataaagatcatgtactgcgtgaactataaaaatgacacaagcatatgggcttgtgacagaccaaaatttagaagaaagaattctgcacaatcagtttccttgtctttctgtccagaatcttatcacacatgcatatttcagtcctgaaagcatgtggttggtgctgtacttattctcagtaaatgtaataaaccagaatcctgacctcgtttttttccttatgtataatttttgttaggttgcaaaagaagcttcagatatggttcttgcagatgataacttcagtacaatagtcgcagctgttggtgaagggaggtcaatctacgacaatatgaaggcatttataaggtacatcattatgccagctatggctaaccctttcttgctttgttagcatctgacaagtcaataaaaatgctgtcagttaatgtgggctatatgttattgcagatatatgatctcttcaaacatcggggaagttgcttccatatttctaacgtcagctttaggtattcctgaaggtctcatccctgtgcaacttctgtgggtcaatcttgttacagatggtcctcctgcaacggctttggggttcaacccacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0281600, RefSeq:Os03g0281600