Difference between revisions of "Os10g0190000"

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(Created page with "{{JaponicaGene| GeneName = Os10g0190000| Description = Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19) (Ubiquitin-protein ligase M) (Ubiquitin carrier protein M) ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0190000|
 
GeneName = Os10g0190000|

Revision as of 21:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0190000

Description

Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19) (Ubiquitin-protein ligase M) (Ubiquitin carrier protein M) (Nedd8-conjugating enzyme Ubc12)

Version

NM_001070808.1 GI:115481359 GeneID:4348232

Length

6279 bp

Definition

Oryza sativa Japonica Group Os10g0190000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5925161..5931439

Sequence Coding Region

5927757..5927766,5928238..5928346,5928862..5928940,5929029..5929145,5930283..5930420

Expression

GEO Profiles:Os10g0190000

Genome Context

<gbrowseImage1> name=NC_008403:5925161..5931439 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5925161..5931439 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtgaatatattagtgagctaaacctacccaagagcacatcaatttcttttcccaatggcaaggatgatctgatgaattttgagatcatcgtccgacctgatgaaggatattacctaggtggcactttcgtctttacttttcaagtctctccctcttatcctcatgaacctccaaaggtgaagtgcaagaccaaggtataccatccaaatattgatttggaaggaaatgtatgcctgaacattttgcgtgaagattggaagcctgttctcaacatcaacactgttatttatggccttaaccttctttttacgcaaccaaacgatgaggatccgttgaaccatgaagcagcagctgtcctccgtgacaacccaaagctgtttgaagctaatgttaaaagggcaatggccggaggctatgtgggtcaacactatttcccaagatgtgcatga</cdnaseq>

Protein Sequence

<aaseq>MREYISELNLPKSTSISFPNGKDDLMNFEIIVRPDEGYYLGGTF VFTFQVSPSYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLNL LFTQPNDEDPLNHEAAAVLRDNPKLFEANVKRAMAGGYVGQHYFPRCA</aaseq>

Gene Sequence

<dnaseqindica>2597..2606#3078..3186#3702..3780#3869..3985#5123..5260#cctagttccttcccttgcgtaatagaaagagagatctcccgtctcgtccgtcgtctcctccgctccttgcgccaagacgagtcgcggctcaacagaggaggggcgccgatctccatctggcgagcagagcaggggaggggaagggaaggtatcctggtgagcatcaacatcctcttcctgattcatctctctctcccaccgggactacttatgtcttggaatttgcttgcgttcgttcgttaaccctagcttctcttctagatctggaagaagctcttctcttaatttcagagccttaatcttaatacaagtaatagtttgtttgttcccccaaaagtttaggggttcaactgtcccaactcccaagttggatccgcccctgcctgtgtagagctcatctcccttagcgtcgcctatgattctgagagtttcaccccaacagccgtgttgatgagctttgtaacgacctgtttttctcctgctcttgataaaattaggccagcctgatttaagaaaagaagtaaacattctagctttaatttcccgctcgattcgcatggggttagattaatgtttcttctcgagtatgtattgagaaaccaaatcgtgcatgtgtttatttctggaaggagaagtgctataaatgtctgtaatgtagaagcattttgtaaatgcatgtgcattgagttctttttattcgtatctcgagagtttgtacaataagatgattgttctgcacacaccaaaaaatggtgcagctgcaaacaccttgtggttgtgccttcctaaatactacagaaacattaatgagtctagtgtagatggccaaatgaagcacactattgttatggcattacggtaagggccaggaggtatatgctttcaaccgtgttgtgtctggtcccaatgttcttaagttacaacccaggtggaacaaataagaaacagggcgtccggattggttagcttggtaatcagattacaccaaaaaaaacctgaaccaaatgcctcctaagtttagccgagctacttagttactggttgctgcttagtgtattagtattatatttaaattttggatcttcctgttgtcaaaactcatcaagtattgtttctccagtcccctctcaagaaatcctttctgggcagttgaaggtcgtgttgaatttcctttttgtgttttattcatgttttatgctgtaatggaaataacaaaacagagtgatgactgatgtagagcagacttctagtcctaaccattccatttttttgtgattaagttctaaccattcgactaaaataaactacacatcagagatgcagaaatgcaactaattatgttctcttttgtgctttcatcaggtgatagtgttttttctctgattgtaaatcttttccccttttctttgcagaaagatgcttaatcttatcaaaataaaggataaaaagaaagagcaggcagcaagtgctgctggaaaggctcctgtgaagaagcaatctgctggagagctccgtcttcacaaaggtgcattgagttatagatgactgtcagcacttccttttggtcataaaaacatgttgtctggacattgacagagccttcacagtgcaatctttatctctaatttattttgtaatgtaatttaaaatacgataaattacaatattatgaagataattttgatactaatctacaattctgtatatatatgattattatgtatctgatattaatatttattttttttgttattttaactagatgtgtgtctaaaatgaatgtgttcttgtgaccaaagtaattacctttgttgagttctcttacaaaaatttgtgagctagacatacaattccttgaattttaaacttttaactaactctcaaagcttatcaaactgttctcataaatgtaatgtttccactatcctcacaggtggtttttatttgaataatttgatgctggcatgctgctgcatatgtggctatgctcttttttaagttgttagcaatctctttattttcatgttgagcatgactagtagtatatgcgtcatgtggggcagtcctgccggctgccggtgtcaccaaaggggacctgatagtgctccagcacacatgccagatgtggaacagtagctctctcatcttctctttccttcatttctctccttatttcctctctttcttgaatcctgatctagaggagatggagcagcgagggtaggagcagcactgggttaatcagtaggagaagtgacaaagaagatgatagcagggatgtcaattaatacttacagttgctattcctcatcgtgtgaaaggaaattaaagtgacaggtggatggctattccaatcatccaatgcagcgtatattaatttgtggcactttaagctaggtgtatggtatcttatttaagtaatgcattccgtacactggcatgctgtctagatgccatggaatatgtgaaagcaactcttctagcgattgtgcaaatggccaaaccttgaatttgtggaccatccaagttggagtgccttaaaagattttgcttgaggccaagagctatatgcttgcacggactaagccacaagtccatgcgtgaatgtgagtatctgttgtttgtatgtgacctactggggctaaatttggaattttcaatttctctttttttggtggttaaagaagttaatttcaatttctatcattcgtccaaattattgagttttgatacaaatactccctttgttccacattgcaagtcattttagttttgtcccaagtcaaaacttctttaactttgactaagttcatagaaaaatgcaccagtatcgaaaataacaaataaatgcactgtcatggtggttttaatgaaactaatttgatattgtagatgttggtgcattttttctaggaatttggtcaaagttagagaattttgacttgggacaaaattaaaatgacttacaatatggaacagagggagtagattttcatattttttattatcataaacttctccttgttacaactttatcatgtcataaattatttatgactttatatgatattgggcagatattagtgagctaaacctacccaagagcacatcaatttcttttcccaatggcaaggatgatctgatgaattttgagatcatcgtccgacctgatgaaggatattacctgtaagtagaatgcatctctgttttgtgtttattatgttgttctgcactacctcacaagtttatgtcaatttaaagaaccttcactatttttaaaagatcatttatgtcgtgttaaaaaaaagcatttaccagttctttcagaattatttatggcaaaacagggggttatttaaggcagaattatttacctgtctgttgcctagttaataggcatgcggcatgccactacttaatgcggatactccatccttgtttgccttaacataatcacattttgactactgagttttgtaagctttcgaaggcagtcatctagcaccttccagccttgctgatttgttcacatagatgactgactatccttatttagactcgcctgatttgttataaggtcctaggctctgatgagctgcgactagcacttgtgaacactgttttttctttttgcttaaatgtcaattctacataccatgttcccacctataattctatttacaatgatttttcctttttagaggtggcactttcgtctttacttttcaagtctctccctcttatcctcatgaacctccaaaggtgaagtgcaagaccaaggtataagatggggctttctatgctatatattttcccagtgaatatgttgcctcttaaccaatttctatgcattataacttgcattcaggtataccatccaaatattgatttggaaggaaatgtatgcctgaacattttgcgtgaagattggaagcctgttctcaacatcaacactgttatttatggccttaaccttctttttacggtatttcagtttccttgacccctattgattgcaattatgtatttcggaaatagataaaaaaaacaaatatctaatcatgtttacaatgctgttcaaacctatcatatcattatgcttcgttgtttacgagataaggccttatgtttacgatgctgttgtcatctacattgtgcttcatggtgtttgtgatactcgttttctactttaagcagcaatgtggtaatcttatcaatttgagaaaggcatgcataattcatggtgtcctatttttgatgtactttaagattgaattcaattctcgatgtatagtcttggtacagaagtaaaaaacttatgcaaaggtttgtataaagaactatgatatatttttacttatttactatgtacaggagtattagttaaatagttatagttgacatgagttctccattatcttgaattaaatgtacataaaaaatttgagtagtttctaagtcacggataagtaaaattaggcagcctaaatttctatggaagacggaagttgatatacttatatgtagtttctgagtcattgcaaccatgatttgtgtgggtgatatgttagagctgtttgggctgaggtctttggatgccaatttcttatctttagttataatttccatactgttttgtttgtaactacaatgtggccaaaacttaggtgaaaaattaccaaaatttgtcagtgtagtgtgttatttctttggcacgaaaaaaacaggccaaagctaagccccaaggcgcttatttgttgacacccacttcattttgtttggttttgagtatggatgctggactagtaacatcaatcacaactggcatagtaaaactactaagaggaaaaattgctcccctgaaccttgtcattgaggatgacaccttggagaaacccttgttctgtaacttctgttggccaaacatctcaacgaaagtgccgggtagcatgaatgatttttttttccttgagattcttgttggatgatcagattatacattgcttccattccttgagattcttgttggatgatcagattatacattgcttccattgccattggtgggttacagtttagtaagatttcttgtggcttagtttgcttttgattttgtccgcagcaaccaaacgatgaggatccgttgaaccatgaagcagcagctgtcctccgtgacaacccaaagctgtttgaagctaatgttaaaagggcaatggccggaggctatgtgggtcaacactatttcccaagatgtgcatgatatggtgctgggtgccacaaacattagtaagttaagccacctgggcctcttcccgacattctggattgtatggtttcggtgcgttaaagtgctgtcggatggatgtgatatgttgactgtatgacggcgatgctgccatctgtgtgatatttgtttaaagtcagtaaattggtaatctggtggtggtacagataaaatttgagttgcagttcaagctggatttatacatcattttcttttgtgcagtttgcttcagtcagaacctgatatccatctttgctcgtagatagtgctgtgtatgttttccttcctgtatggctgtatgaggcttgaattcggtccaactatcagattgtagtttacgacttgtctacataactctcaaaatctccaatcgacttgtctacataacacacaaggcacatgtttataggaggatcagagattaagggttattaataagagcaccattcgaaaatttcatttttttttgtcactataggtgaataccagtcttttgacatcccacgaaaaatttggatcataaggattgagttacaaaggcaaaggcgaatcttctgcaaaagttaaacgtgctgaagtccacaagtcttgtgtggcaaggggaatcgcgtaaattcacgttcgagggacgtggttcgttgcgtcgccgtcgcttcctcatccgacggcgcaatttcctgtgtgcgcgcgttgtttgttgggggtggccgggtggggtataacatctcaccgtgatcgcctccgttgccgactacagcccgcagctgcttaaagtaactgggccgaaccgaaccgttggacatctcgttttttatttggtatttttattctcttcagcctatgttagctacatttttattgagaattgagccaattattttgtaataagtagttattatagctctttaaagcaaaaaccgaacatgtatactattgactaaataacaataacggtggtgatggttctgccaccaatccaccaccacttctttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0190000, RefSeq:Os10g0190000