Difference between revisions of "Os03g0315800"

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(Created page with "{{JaponicaGene| GeneName = Os03g0315800| Description = Similar to 30S ribosomal protein S1, chloroplast precursor (CS1)| Version = NM_001056473.1 GI:115452674 GeneID:433265...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0315800|
 
GeneName = Os03g0315800|

Revision as of 19:34, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0315800

Description

Similar to 30S ribosomal protein S1, chloroplast precursor (CS1)

Version

NM_001056473.1 GI:115452674 GeneID:4332652

Length

4219 bp

Definition

Oryza sativa Japonica Group Os03g0315800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11402165..11406383

Sequence Coding Region

11402365..11402460,11402577..11402663,11402747..11402857,11402944..11403225,11403444..11403524
,11404096..11404371,11406052..11406229,11406279..11406340

Expression

GEO Profiles:Os03g0315800

Genome Context

<gbrowseImage1> name=NC_008396:11402165..11406383 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11402165..11406383 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccgagagcgcgaatggcgtccctggcgcagcacgtcgcggggctggcgagcccgccgctctggtgtgcgggacgtacgcgctcaccaaggaggagcgggagcgggagcggatgtgccagctgttcgacgaggcctccgagcgctgccgcaccgcgcccatggagggcgtctccttctcgcccgaggacctcgactccgccgtcgagtccaccgacatcgacaccgatatcggctcactcattaaaggaacagtgttcatgaccacttcaaatggtgcatatgttgatatccaatcgaagtctactgctttcttgcctttggatgaggcatgccttctcgatgtcaaccatatagaagaggcagggatccgtgcaggtttggtagaagagttcatgattattgacgagaatcctggtgatgaaactttgattttgagcttacaagcaattcagcaagaccttgcctgggaaaggtgcagacagcttcaagcagaagatgttgttgtcacgggtaaagtaattggtggaaacaaaggaggtgtggtagctcttgtggagggccttaagggatttgttccattttcacaagtgtcatcgaaatcaactgctgaagaactgcttgacaaagaactacctctgaagtttgtggaggtcgatgaggaacaaggcaggcttgtcctcagtaaccgcaaggcaatggcagatagtcaagctcagcttggtattggttcagttgtcttgggaactgtcgagagcctgaaaccttatggtgcatttatcgacattggtggaatcaatggccttctccatgtcagccagattagtcatgaccgtgttgcggacatctcgacagttctgcaaccaggagatacgctcaaggttatgattctaagccatgaccgtgaaagaggccgtgttagtctttctactaaaaagcttgagccgacacctggtgacatgattcgcaatccaaagcttgtttttgagaaggctgatgagatggctcagatattcaggcagaggatagctcaagcagaggcaatggctcgtgctgatatgttaagattccagcctgagagtggattaactctcagttcagagggcatcttagggccattatcatcagacacaccttctgagggctcgggagaagggcaaaccacagatgaatag</cdnaseq>

Protein Sequence

<aaseq>AESANGVPGAARRGAGEPAALVCGTYALTKEERERERMCQLFDE ASERCRTAPMEGVSFSPEDLDSAVESTDIDTDIGSLIKGTVFMTTSNGAYVDIQSKST AFLPLDEACLLDVNHIEEAGIRAGLVEEFMIIDENPGDETLILSLQAIQQDLAWERCR QLQAEDVVVTGKVIGGNKGGVVALVEGLKGFVPFSQVSSKSTAEELLDKELPLKFVEV DEEQGRLVLSNRKAMADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISH DRVADISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEM AQIFRQRIAQAEAMARADMLRFQPESGLTLSSEGILGPLSSDTPSEGSGEGQTTDE</aaseq>

Gene Sequence

<dnaseqindica>3924..4019#3721..3807#3527..3637#3159..3440#2860..2940#2013..2288#155..332#44..105#cccgaagcaccacaccacaaccacaacacaccacagcgggtaggccgagagcgcgaatggcgtccctggcgcagcacgtcgcggggctggcgagcccgccgctctccggcgcgccgcggcgccgccccgcggcgcccacgcggccgtcggcgctggtgtgcgggacgtacgcgctcaccaaggaggagcgggagcgggagcggatgtgccagctgttcgacgaggcctccgagcgctgccgcaccgcgcccatggagggcgtctccttctcgcccgaggacctcgactccgccgtcgagtccaccgacatcgacaccgatatcggctcactcgtaatccaccccccgcaaccttcctcctgttcttctcaatcgtccttgctcgctcgtatgatgtgaaacagatagtagcaattggtgcttaaaaacaggcttaactttcagtaggtgatgcctcgttttcctgcaagtcacttgagtcttaccttgtgctcaattggatacggcttgcgggagattggagtcacttgccctgtatatgtcactagttgttacatttcggtttgctagttgttttaggctatcaacaacaaggtgattggttactgaaagttacccaactagaattctattgtttgcttgcttggaatgtgctctgcgcatcatgattcgtctataatgtgttactcccctaaggtacaagcgaaagaatgttcagtttactacaagtacctcttccattttctgacctgctcatagtggtagcaggtatagtgataatcaggaatagtagtttcattagcccttacctgttatgttttgccttttgtgaaactagttgaacgctagaactcacgcaattgtgtggcttcatctaaataatttagttgttttttcaataatgtttactaaaaaaatatatatgtaggtctgatacttcaaataagagcaatacatggccatatcatattcctctataggctggagatttatacgatagctatgtattcagtgtaagctagagtagttcatattaatttgatgtactttaaattaagcttgacttttgattcaattctggtgaattagacttgaacggcgaattcccttttttacctccttggggatgataccttattggaggcttggagcaagagtttgatctaccaaaagcgtgtggtttttatttgtgtttgctacatcctctctttgattgcttccgcacgtgtaccaagttatacgaacatcatacatatgcctacctcaccctcatggcctcacaccggtcaccaatccatcagggcatagatatttctttgaagcatgaatatgcataaggtccaaagcacatgtaggatgttcatgtacatgtaatttccatcaaaaaggggtttccccttcaaaagatagaaatgtccttgaaatgtcatacaggtggggtctgtttttcttctttatatagttattttctccttttttttaaaaaaaaaacaaagccaaattcacattaaatgatagttaaagtaagctggagttgatccattgatccattccctgtagtaactagctgaccatggtaaccccaaactcgatgagatttcagttactgaccgattgctgcttgtcttgactgtaattatttatgtctatttaaataagaattgcttactatttatcaaccaatattatactcaataatcagctatacatctcttatacgttacaaatgcacatggacacaaaaactcattttgtccagctgccagatttgcattgatccttagaattttgctctgttagcaatgattctgctgttagtatctccttttgggcatgcagtactgttatctttgctgcaatattttgtgctatgttggtattataagatactgttcatattgcaaattttgtatagtttctcatatattgtattattctatcctttttttttgaaacgatgtattactctatccttaacatctaaaaactatcatgttcttgcaatctctacagattaaaggaacagtgttcatgaccacttcaaatggtgcatatgttgatatccaatcgaagtctactgctttcttgcctttggatgaggcatgccttctcgatgtcaaccatatagaagaggcagggatccgtgcaggtttggtagaagagttcatgattattgacgagaatcctggtgatgaaactttgattttgagcttacaagcaattcagcaagaccttgcctgggaaaggtgcagacagcttcaagcagaagatgttgttgtcacgggtaaagtgagtaaaaatacttgcagaaggaaatatttctgtgctattactattgttcttcactactcctttaatagcttgctgttgttaaacttgtaaccaaatgtttgttaagcactacttcttcttgcccaccgtttcggttctaacaatcaggctttgtccttgaatctatccctcacagcagcagccattgtcctttaatgaaaagaaattattcaagtggtaatttatggtgtacatactttatgacatccaacccatgatttcataatttctatatttgtgctgctgtttacttggtagagcttactgatcaggtactgagatcgtctatagatgcgacaatgaccagaaattttttgtttttattggactattgtgattttgttggtttgttcctgtgcaactagcaatgaactcctgaagtctagaccagtcactttgtaacaacatatcaaaaaatccttttgcaagagcttatatgattgtatgcttagttttattgggatgaatttgctgtaatgtattagtctgcggttacctgacttgttcatttggcaatgttgccccgcaggtaattggtggaaacaaaggaggtgtggtagctcttgtggagggccttaagggatttgttccattttcacaagtgtcatcggttggttctcaatcttattagttactacaaaactttcttgcatcctatggttttaggtgtatgtgcatgtgcatggcatgagctgcctttcatctgcaggtcaaagttgttatgcagataactgaacatttgatcctagtttccaatgcttagttctcaatcacattgtaaacactagctgcccactattttacaaaccacttcttgaccttgatcagaaatcaactgctgaagaactgcttgacaaagaactacctctgaagtttgtggaggtcgatgaggaacaaggcaggcttgtcctcagtaaccgcaaggcaatggcagatagtcaagctcagcttggtattggttcagttgtcttgggaactgtcgagagcctgaaaccttatggtgcatttatcgacattggtggaatcaatggccttctccatgtcagccagattagtcatgaccgtgttgcggacatctcgacagttctgcaaccaggagatacgctcaaggtattttttgcattcgtacttgagaaaagtatactatctaaagtttatagagctaaggccagagtattttttttaaatgctattaggttatgattctaagccatgaccgtgaaagaggccgtgttagtctttctactaaaaagcttgagccgacacctggtgacatgattcgcaatccaaagcttgtttttgagaaggtaagtttgaaagcaatattccttgatctggtccatctggaatgtatacaaactgacatactgttttctctgtctcaaaacaggctgatgagatggctcagatattcaggcagaggatagctcaagcagaggcaatggctcgtgctgatatgttaagattccagcctgaggtactgccatcatcattttattgaggctgcaaaatgaaatttatctgacattattcataagccactgcagtaacatttggctgaattaaattgtttctccctgtatctcttcacagagtggattaactctcagttcagagggcatcttagggccattatcatcagacacaccttctgagggctcgggagaagggcaaaccacagatgaatagcttcaataggaagattacgtctgagtagaaagctgtgatggtagctcatcaactcattttcccacgatctaaaaggcatgaagaagacctattgtattccaaccatttcccatcttcgatctgtgcttgtatcaatcaatgtgtatgaaagtaaagttactgaaagaaatggatgttgcttccctgttgtaaagttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0315800, RefSeq:Os03g0315800