Difference between revisions of "Os03g0320100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0320100| Description = Alpha-L-arabinofuranosidase, C-terminal domain containing protein| Version = NM_001056486.1 GI:115452700 GeneID:43326...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0320100|
 
GeneName = Os03g0320100|

Revision as of 19:34, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0320100

Description

Alpha-L-arabinofuranosidase, C-terminal domain containing protein

Version

NM_001056486.1 GI:115452700 GeneID:4332668

Length

2299 bp

Definition

Oryza sativa Japonica Group Os03g0320100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11600227..11602525

Sequence Coding Region

11600615..11600764,11601108..11601251,11601331..11601529,11601744..11601800,11602084..11602187
,11602263..11602334,11602428..11602523

Expression

GEO Profiles:Os03g0320100

Genome Context

<gbrowseImage1> name=NC_008396:11600227..11602525 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11600227..11602525 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcaataaaagcgtcttacccggacatcaaaattatatcaagctgtgacatatcttccatttcagcagtcaaccctgctgatctatatgatgtccatgtttatacatcatctggtgatatgttttccaaaacaagaatgtttgatagcacaccccgcagtggacccaaggcatttgttagtgaatatgcggtgactggaaatgatgctggccgaggaacattagtagctgctctagcagaagctgcatttctcattggattagaaagaaacagtgatgtggtcgagatggcaagttgtgctccactcttcataaatgacaacgatcgcgggtttagtccagatgccatagtcttcaactcatggcagcactatggatgtccaaactactggatgctacacttcttcaaggactcaagtggtgcaacacttcatcccttgacaattcaggtgtcaaactatgatcaattggccgcatctgctctcacttggcagaattctaacgatggaaacacttacttgaaaataaaggttgtcaattttggtaacaaagctgtgaatcttaatatagctgtagctggactagagaatggcattcaggaattcgggtccataaagacggtgcttacatctggttggctgcgggatgagaactctttccaacagcctgacaaggtggtgccggcggcaagccccataaccaacgcgggcgagaagatgggtgtcattgtggatccatactccctcacctcgtttgatctcctcctggacaccaacacagacaaatacccactattggagtcgagctttcattcaagcatgtga</cdnaseq>

Protein Sequence

<aaseq>AIKASYPDIKIISSCDISSISAVNPADLYDVHVYTSSGDMFSKT RMFDSTPRSGPKAFVSEYAVTGNDAGRGTLVAALAEAAFLIGLERNSDVVEMASCAPL FINDNDRGFSPDAIVFNSWQHYGCPNYWMLHFFKDSSGATLHPLTIQVSNYDQLAASA LTWQNSNDGNTYLKIKVVNFGNKAVNLNIAVAGLENGIQEFGSIKTVLTSGWLRDENS FQQPDKVVPAASPITNAGEKMGVIVDPYSLTSFDLLLDTNTDKYPLLESSFHSSM</aaseq>

Gene Sequence

<dnaseqindica>1762..1911#1275..1418#997..1195#726..782#339..442#192..263#3..98#ctgcaataaaagcgtcttacccggacatcaaaattatatcaagctgtgacatatcttccatttcagcagtcaaccctgctgatctatatgatgtccatgtaatttactatattgctcagtctttacctagacaaaatctcatcttaattcaggaataccttaggtggactttgacattatctctgtggcaggtttatacatcatctggtgatatgttttccaaaacaagaatgtttgatagcacaccccgcagtggacccaaggtattatctatcaattattgtctcatattttatgccttcaactgactggtcatgtgccttgtgtgtactgtgcaggcatttgttagtgaatatgcggtgactggaaatgatgctggccgaggaacattagtagctgctctagcagaagctgcatttctcattggattagaaagaaacaggtcttttgcctcttttatggcatttctagggcctgttcactttgatgccattttcaaccttaccaaaatttggtaaagttgccaataaagtggctacatttagtttgctgccaaattttggtaaatatataagaaatcctgccagttgccaaaattttggtaactatgccaaaatttggtaaggttttttttggcatcaaagcgaacaggccctagttttggcacctgggtgatacttgcttttattggaagcttacttgttttgcgagctgtttctgtgcagtgatgtggtcgagatggcaagttgtgctccactcttcataaatgacaacgatcgcgggtaaattgtcaacttctccaatcaagcttttgtctacactttaatctcctcaccctgctacatatttgtccactgaagacaggatgaattttggataacccacctacttcataggcaaactgtagaatgggagtatctctagagatagagacgtatatagtagttcttcatgataaactgttcttttaccaatgatgcatgccctgttgaataggtttagtccagatgccatagtcttcaactcatggcagcactatggatgtccaaactactggatgctacacttcttcaaggactcaagtggtgcaacacttcatcccttgacaattcaggtgtcaaactatgatcaattggccgcatctgctctcacttggcagaattctaacgatggaaacacttacttgaaaataaaggtatttttactatcccactaaggaacatcgctgacacaactgaaattgaaataaccggccaggaaattctctcttgcaggttgtcaattttggtaacaaagctgtgaatcttaatatagctgtagctggactagagaatggcattcaggaattcgggtccataaagacggtgcttacatctggttggctgcgggatgagaactctttccaacagcctgacaaggtttgctacatttatttgattcactgaaatttgatttttttttttctgaatgaaaatgcacttccaaatatgagatgatgaatggttctttcgtagctcccatagttgcagtgtatgaatgtttatagggcatgttcactttgatgccaaaaaaaaccttaccaattggtatagttaccaaaattttggtggcaggatttcttatatatttaccaaaatttggcagcaaactaaatgtagccactttattggcaactttaccaaattttggtaaggttgaaaatggcatcaaagtgaacaggcccatagtgtcggtcttaaactttggtgtgaaatgctacaggtggtgccggcggcaagccccataaccaacgcgggcgagaagatgggtgtcattgtggatccatactccctcacctcgtttgatctcctcctggacaccaacacagacaaatacccactattggagtcgagctttcattcaagcatgtgaatacagcgcgaaatgtaatggcatagacattaggggaattcccgtgtgggaaatccaaatttgtgaataagtataaactacagatactgctcgcctgtctgcagaagcagtgaaagtcctggtatttgttgtgtatgttatcatgtattcaccgtctccgggcctatgagcattgtctcattgcgtgaattgctgagaaacaactttaatatacctgtaacatcacgctcaagcatccgttgtagtctagctggttaggatactcggctctcacccgagagacccgggttcgagtcccggcaacggaatctttttgttgccctgtctttttaagaatgtaaacattggttccttttgttttgtactatatattttcgctctgtacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0320100, RefSeq:Os03g0320100