Difference between revisions of "Os03g0347300"

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(Created page with "{{JaponicaGene| GeneName = Os03g0347300| Description = Zinc finger, CW-type domain containing protein| Version = NM_001056633.1 GI:115452994 GeneID:4332823| Length = 9721 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0347300|
 
GeneName = Os03g0347300|

Revision as of 19:35, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0347300

Description

Zinc finger, CW-type domain containing protein

Version

NM_001056633.1 GI:115452994 GeneID:4332823

Length

9721 bp

Definition

Oryza sativa Japonica Group Os03g0347300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13040939..13050659

Sequence Coding Region

13042562..13042759,13043952..13044112,13046107..13046264,13047769..13047929,13048024..13049462
,13049590..13050002,13050405..13050583

Expression

GEO Profiles:Os03g0347300

Genome Context

<gbrowseImage1> name=NC_008396:13040939..13050659 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13040939..13050659 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgtcaaatggcgggattatacctggacctgcaaatgcagcttctcttcctgcacctgttttgatagaggataattgggtatgctgtgacatgtgtcataaatggcgtctcctcccctacgggacaaacacttccatgcttccaaaaaagtggatatgcagcatgcttgactggctacctgggatgaacaaatgcgacattagtgaggatgaaacaacaaatgctctaaatgcactttatgtcactcaaatccctgccgctggtgtttcttcaggtggccctcacactgcgcatgcaagtgtagcagcatctagcacctacaatataagtggacaactgggacagagtaggaaaaggaaaaatgctctgaaagacgaaaactgttacgagcatgatcaacaagcccctgcaaaaatgactctcacgagcaatcaacaagcccctgcaaaaaatagagaagttgttgatagtgaacattatactaatgacagagatcctgtaagcacacatgatctggtgccacagagcaaatcagcttctgaaaggcataagtctaagcacaagagtcgcagtagccactcagatggaggagatcttacagaaaaatcgaagaagcattcaaaatcaaaaaacaggagaggaattgatcgagatgagcacaaaacatctaagaagacaaaaaaagaggatcgacattactttaacaaagattggaaaaatgaatacgatttagctggcaacaaagttcgtgatgaaaccaaagctttatctgcaaaagcaaaaatgtcaaaggactcatgtgaacaagatgagttttctttacgcaaggaaaaagcttcaaggtttgatattttggaaaaaacaaagagaattaatgatgatgatgtggcctttcatgagaagatgaaagaacatcgtgcaggcatagaaacattagatttgtctggcaaaaagaagacagtgaaggaatgggaggataaccggctcagttcaatggaccacacaagcaaagggggcgataatgagaatttgaacgagagattatcaaagataaagaagtccgaagctaggcctgaagaagttcaggatgcaaatgcattattttcttctgctggaaggcgtcaagataatgagctagttgctgacaacaaatttgttacttgtaaagaaggtccatcagaactatgggataatcaacctcccagacaggtcttgaacttggcggaacccactaggagggatgttgcctgtcttcagtcttctacggttgcaacttcaagctcttcaaaggtctcaagctctcggagaaacaaaaattctcgagaagcaaagggctctcccgttgaatcagtatcttcatcaccactgaaaaattcaaacactgataagatttctaaggccaggaaaactggaaaagatggagaattgaatgctgattcaagcatcttgcataccccaatgaaatatccaacccacgaagttggtttactacatactgggcagcaagctgtgggtgaagccattctgcgtggttctacaaataactccggtatggggagagtagataatcaattgtaccctggtgataaaaagatcttggatatgcatggccctacactacaacctgatcagcaggattgttttaacccgagggctacagctgattccactggacataaaagtaaaaatagtgctccttcacgccaaggtagaaatggatccagtaacttgatttcagagggaaataagcagatagagatgtcatccagaaaagagaaattacgtcctagtattgataatcaagatatgcaaaagtctattggtcaagataatcattctcatatgaaagaaggcaaatcagaggttcacaccactagagtaaaaccaggtgcttcaaaaaaccacacacaattaaggtccaatgttgaaaatggagattctgcgagtccaattaggagggatggtaatatgattgcatttgcactcaaggaagctcgggatctaaaacacaaggctaatcatttgaaggaaaaaggacttgaacttgaaagtatgggcctgtactttgaagcggctttgaagtttctgcatgttgcatctctttgggaaactcctaatctggacaattcgagatcaggcgatgttgctcagtcaatgaagatgtattctgaaactgcaaaactctgcagcttttgtgctcatgcctatgaacgatgcaataaaatggcttctgccgctttagcatataaatgtgtagaagtggcttacctcaaagcagcgtattacaaacaccctagtgcaagcaaggatcgacaagaactacagtcggttgtacagatagctccaggtgaatctccatcatcgtctgcctcagatatcgataatttaaatagccatggattgtcaaaggccctttcaaccaagggtggaaactcaccccaagtggctggcaaccatttgccactggccgttcgtaaccaagcacacttattgaggttacttgcctatacaaatgatgtcaattgtgcattcgatgcaactcggaaatcacaggttgctattgcttctgctgctagcagtcaggaaaggggaaaaactgtggacgatggtcttgcttcagtaagaacagttttagattttaacttcaacaatgtcaatgagctactgagacttgtccggctttctatggagttaatcaacacctga</cdnaseq>

Protein Sequence

<aaseq>MPSNGGIIPGPANAASLPAPVLIEDNWVCCDMCHKWRLLPYGTN TSMLPKKWICSMLDWLPGMNKCDISEDETTNALNALYVTQIPAAGVSSGGPHTAHASV AASSTYNISGQLGQSRKRKNALKDENCYEHDQQAPAKMTLTSNQQAPAKNREVVDSEH YTNDRDPVSTHDLVPQSKSASERHKSKHKSRSSHSDGGDLTEKSKKHSKSKNRRGIDR DEHKTSKKTKKEDRHYFNKDWKNEYDLAGNKVRDETKALSAKAKMSKDSCEQDEFSLR KEKASRFDILEKTKRINDDDVAFHEKMKEHRAGIETLDLSGKKKTVKEWEDNRLSSMD HTSKGGDNENLNERLSKIKKSEARPEEVQDANALFSSAGRRQDNELVADNKFVTCKEG PSELWDNQPPRQVLNLAEPTRRDVACLQSSTVATSSSSKVSSSRRNKNSREAKGSPVE SVSSSPLKNSNTDKISKARKTGKDGELNADSSILHTPMKYPTHEVGLLHTGQQAVGEA ILRGSTNNSGMGRVDNQLYPGDKKILDMHGPTLQPDQQDCFNPRATADSTGHKSKNSA PSRQGRNGSSNLISEGNKQIEMSSRKEKLRPSIDNQDMQKSIGQDNHSHMKEGKSEVH TTRVKPGASKNHTQLRSNVENGDSASPIRRDGNMIAFALKEARDLKHKANHLKEKGLE LESMGLYFEAALKFLHVASLWETPNLDNSRSGDVAQSMKMYSETAKLCSFCAHAYERC NKMASAALAYKCVEVAYLKAAYYKHPSASKDRQELQSVVQIAPGESPSSSASDIDNLN SHGLSKALSTKGGNSPQVAGNHLPLAVRNQAHLLRLLAYTNDVNCAFDATRKSQVAIA SAASSQERGKTVDDGLASVRTVLDFNFNNVNELLRLVRLSMELINT</aaseq>

Gene Sequence

<dnaseqindica>7901..8098#6548..6708#4396..4553#2731..2891#1198..2636#658..1070#77..255#tgggccagcaaaaaaggagatcccttccagtgtaaagcatggcacatttccaggttcagaggaacagcagttgcatatgccgtcaaatggcgggattatacctggacctgcaaatgcagcttctcttcctgcacctgttttgatagaggataattgggtatgctgtgacatgtgtcataaatggcgtctcctcccctacgggacaaacacttccatgcttccaaaaaagtggatatgcagcatgcttgactggctgtaagttctagttcagtttgattagaattgcatttatccagtgttatgcctcaccatacatgcttgcttcaattggcaccttacatatgttaagttgtccttagtacatggttaaacgttgttaaatatagttatttgatctggaatttctttgtacaccttaaacgatttctgattagacaggtaatttgactagattctgatatctccccccgaacacccatccaccccgccttaaacaaaaaaaaaagtatttttaagtggtccataagctgtgcaaattcaacattgaggtagcactctaattcaagggtcatgcagttttctttctctgagtggtctgacaattggggaagaaaaaattccattactgaaaaatacaatccaaatttgtctttgcagacctgggatgaacaaatgcgacattagtgaggatgaaacaacaaatgctctaaatgcactttatgtcactcaaatccctgccgctggtgtttcttcaggtggccctcacactgcgcatgcaagtgtagcagcatctagcacctacaatataagtggacaactgggacagagtaggaaaaggaaaaatgctctgaaagacgaaaactgttacgagcatgatcaacaagcccctgcaaaaatgactctcacgagcaatcaacaagcccctgcaaaaaatagagaagttgttgatagtgaacattatactaatgacagagatcctgtaagcacacatgatctggtgccacagagcaaatcagcttctgaaaggcataagtctaagcacaagagtcgcagtagccactcagatggaggttctgctctctttcatgtttattgcttatatttagctgatatgtattatcttctgatatttttcagtaaatactgtgtttagttatttaaattgtttactgacatataattcctatttaaatacaggagatcttacagaaaaatcgaagaagcattcaaaatcaaaaaacaggagaggaattgatcgagatgagcacaaaacatctaagaagacaaaaaaagaggatcgacattactttaacaaagattggaaaaatgaatacgatttagctggcaacaaagttcgtgatgaaaccaaagctttatctgcaaaagcaaaaatgtcaaaggactcatgtgaacaagatgagttttctttacgcaaggaaaaagcttcaaggtttgatattttggaaaaaacaaagagaattaatgatgatgatgtggcctttcatgagaagatgaaagaacatcgtgcaggcatagaaacattagatttgtctggcaaaaagaagacagtgaaggaatgggaggataaccggctcagttcaatggaccacacaagcaaagggggcgataatgagaatttgaacgagagattatcaaagataaagaagtccgaagctaggcctgaagaagttcaggatgcaaatgcattattttcttctgctggaaggcgtcaagataatgagctagttgctgacaacaaatttgttacttgtaaagaaggtccatcagaactatgggataatcaacctcccagacaggtcttgaacttggcggaacccactaggagggatgttgcctgtcttcagtcttctacggttgcaacttcaagctcttcaaaggtctcaagctctcggagaaacaaaaattctcgagaagcaaagggctctcccgttgaatcagtatcttcatcaccactgaaaaattcaaacactgataagatttctaaggccaggaaaactggaaaagatggagaattgaatgctgattcaagcatcttgcataccccaatgaaatatccaacccacgaagttggtttactacatactgggcagcaagctgtgggtgaagccattctgcgtggttctacaaataactccggtatggggagagtagataatcaattgtaccctggtgataaaaagatcttggatatgcatggccctacactacaacctgatcagcaggattgttttaacccgagggctacagctgattccactggacataaaagtaaaaatagtgctccttcacgccaaggtagaaatggatccagtaacttgatttcagagggaaataagcagatagagatgtcatccagaaaagagaaattacgtcctagtattgataatcaagatatgcaaaagtctattggtcaagataatcattctcatatgaaagaaggcaaatcagaggttcacaccactagagtaaaaccaggtgcttcaaaaaaccacacacaattaaggtccaatgttgaaaatggagattctgcgagtccaattaggagggatggtaatatgattgcatttgcactcaaggaagctcgggatctaaaacacaaggctaatcatttgaaggttggtgacaccaattgtgttaaatgttgtctcaggcagcataattgtgctgtcaattttgcttggaagtatctaatgacaattttccctgcaggaaaaaggacttgaacttgaaagtatgggcctgtactttgaagcggctttgaagtttctgcatgttgcatctctttgggaaactcctaatctggacaattcgagatcaggcgatgttgctcagtcaatgaagatgtattctgaaactgcaaaactctgcaggtgagctacctgtgatgtccattgaataagtctataaagtttatatacttcgtttcagcaaaagtttatataaagttgtcataggtacaaaagaaagacacaccacgattcaccaagggatgaaaacagtctaggtatttaaaaatacgaaaaagtccactttactacctcaaactatttcataagtccacttcaccccctaaacatattgtaggctcacttttttttcccaaacacgcaggagatctgtgtatcatttcattaagcaaggaataaaaggtcggacttacaaaacaaaaacacgccatcacacccgctgaaaacacaaaaaagacccacccacattcgccccctcctagggcacaagtattgccttggccaacagctcttggaggttagaagctcccgccatacaccatagtgtgccctcattgtaggctcacttaaccccctaatctattaataccagcccacttagcaccctaacccagttttgttaggtggtattgccagcgtggagtggttttgatcagtcaagtcacgtcttgtgcgccagacgcagcctggctatgtccttgctgtggttgaagcttgaagggcagcaactgcgtcttcttcaatgagctgttgcctgttggtttctcacttggacttcgtcgtggttgtggtcacctgtaatttagagggacagttggcagcatgccgaaaagtgtaggatggatgatgtcacagtaacaggcccacagcatcggctgcatcgcacagcgctggtgcagctatggcaaccaaaattctgttacgcagcaacatccatctgatctgactattctttaaaactggatttaacatccatcttctgtatctgatgttgctgcaatggattattagttactaaggatgcggtagtggctgcgatcgctaggatggagaattggagacggttgacggtgggcaggaaccttgaccacagcctcgccacgtgagcaaatgcaactatctggaagcagaaatcagaaagccacgcgaagcatgaatgtcatgatctatcctacctttgctccgcctggcgcctgccatgacccttatactccacctcagcacatatgtgtggcgtggctaggtttaccggtaaaaactactcgacactggcaataccacctagtaccaggttagggtgcaaacatatgtctgcacaaataaactaagggattaagtgagcctaaataatgtttagagggtaggttggactgtgaaaatagtttgaggtagtaaagtggactttttttcaaacaaattgaagataaatctggctgttttaattaaactacactgaatgatgacgaattggatggttgcatctaatcacgtagtgaatactcatccatattaaattgatcagagttttcttcacgtatggttagctatgtctaactttgaaactatatgaactaagctttttaaatgcagtatactaaaatgcttttttttttatttgactgtccagcttttgtgctcatgcctatgaacgatgcaataaaatggcttctgccgctttagcatataaatgtgtagaagtggcttacctcaaagcagcgtattacaaacaccctagtgcaagcaaggatcgacaagaactacagtcggttgtacagatagctccaggtaattgatgtctaaaaaaatgtttgttctagcttgtaaactttaatttgaaatatttgaatcctttttattcctgctgagcttttctgggagttggaggctgcttctactatcctttgttccgcactgtgtcactcactggagttcgagtattaccaatttatttatttaggatgatgagcaatttggtccccaactttctcacttagctcatcaaaaggaccaattttgaccatcaattcagttgccttacactaaatgattaagatgaaaataaccgcttgctgcttcttgacttgtttatgcgaggtctgtgtgcatccaaacatgtagggactggatttggtattcatagagaataatgaattgcattctttgttgaaagagaacattgattgtgtgtgtgatatgtaagggaatggtatattttgtcttctcatggcattctgagtcatctaaatcccaagtcagtgctacttgtacgccacatcagtaaaaggaccatttgatccaaatgtataagttgatggacgaaattgactattttaaaagctcacagactaaagtaagatttgaatgtaagttgtgggaccaaattgttcgtcgttttcctatgttgtgcatcaagaatgggtagaattttggaagtccaggcacagggctcagctattttttttagataatgggaatttataaaacccggcttctacaccaacaggggtgtatacagccacagaaattccgagtgaacaagctcagttcttacacaagtttacaaacaaaaggagcacagaggctcaagcaccttacataaaactaaaagagcacaaagactccaaagcctttcaaagcgaaaaagaccttccaaacaaaccaacgaccacattacccccttaaccgctttctcatgttccatcgatctttaccaaagaagtgcacgacagttttctccaacagtttgcatccttccttcatcacatcacaaatggctatgcaacttgtatttatgtaatcatagtaatcatagttttgtattatgtaactacaaatggtttactagataaaccaaattatacaaaaaatacagttacaggcatatactagtaatggatttgttggcctagagagtgccgcatgcctgcatgtggatatatggattatattgacctggcattaccgaatatctaatttggtttatacgattcttggtaaatccattttgctgatatggctatctggtcactataaactgtactccctccaattctatattaactgacattttggacagcattgcaaataccaatgacttattaattagtcaccatatttcctgttatacccttattaaatacccatatagccttttccgctggatggagacgaagcaacagcatttactgtttgcatgcatgcatgaggggtattctggagaaataaaagggagagagttgtggagaaagctaaaacgtcagtttttgccatccaaacagcattaacccataacgccagttaggccgtgttcgaatgtccaacaaaacttggatgaagttttggattaaagtggcacgcttttcaaactgctaaacggtgtgtttcgtacgaaaactttctatatgaaatttgttctaaaataagtttgaaataattaaaactcaattaatcacacgttaataccatctcgttttgcgtaaaaaacttaatcttcatcttcatcttcatcttaaggagattcaaacaccaccttaatatagaactggagggagtaatcaaattatgcttggtgcattctgcaatctaaccatttgaaaattgataggtacttagtttttttttcatgatgtaatctggtttctaccaattttgttttctatactattgcattgttatcaattctcagacttcatagtatactctgaaaattttatttgtattaagtattttatggcagtgtatggagctttatgtgtatattatttcttatctttatataggtgaatctccatcatcgtctgcctcagatatcgataatttaaatagccatggattgtcaaaggccctttcaaccaagggtggaaactcaccccaagtggctggcaaccatttgccactggccgttcgtaaccaagcacacttattgaggttacttgcctatgtaagtaccttattgcacatgtcccaattaattgttactttcaatcaagctatttacctttagcctggtacaatctttttattactaggttccttcatctgtcccttcatgaaaacatgtttatagatatggatatgcaagctgttccattgtgaactgtttctagtctatggtttatgtctctgtgctgtggaggcttgtttcgtacaggcagaaccaattgcaatttaatacataatctcttttggggatttgaacaatgtatattaacgactatacccttcaaattggaaatgaattagtaggagtttgatgcagtaacattttctttagctcaattagtacaggcagtagtggttatttgtgctatggtgctactgctatcctgtgctttggaatctatttagtgagggaaatctttagtgattccagtaaggctttgctgttaaagctaaaaaaatcaactaatattttaataaaaaaatatagataatgagtgcttttgaaaagtcactgcattgccaaacagggcctaaaatcaggcagttctcaatagctaaattgaaattacattatcaatggtcaaaatggcatttaactcattaacattttgggtaaggtgtaagtggctacccgcgaatccacttatagatcaaaataagccgcgaactcgcttattttgacctataagcgggttcacgggttagccacttacatccgtaattttggttagtagcgaaaccatgaataccataaatattgcaatttaatacagtaatatgaacagcatccgctttgatgacaggagttgtttacactttgaccatagaaaatgtaaatgatagtttggtcaaatgtctaccaaaattacttttggtttggtgataattgggtcagatgtacataaagtgaatatgcaacttaaaaaacaatcgagagtggtactggtacctaaacattgttgtccctgttttggacaccatcctgtgcttggcaaatatgcttccacattggtccacaggaagcagatagcatggaaccaatttttaattgaattgaatatttatttatcatcatcaataactgactgtgattgtagtaattaatgagttagcataatgaaacttcagtgctttgccatcgaataatgatattcggaatctaacttatgtttgttttttctgatctttagacaaatgatgtcaattgtgcattcgatgcaactcggaaatcacaggttgctattgcttctgctgctagcagtcaggaaaggggaaaaactgtggacgatggtcttgcttcagtaagaacagttttagattttaacttcaacaatgtcaatgagctactgagacttgtccggctttctatggagttaatcaacacctgatatgttcagaattgcatgaaatggcaccccatgaatagctattgttggaatgcctggctgcagttacctcagcatatttacacggtgcaaaagagatgggtctactaagtctgcgtgagctccataggaactgggaccggcttgcctggtttatgtacatttagaggcatccagcgctttttcatacaaataggatcaccacttcggattaatcttatacgttttggaggcattcagtgtttttttttttttttgggtacagtttggagcatcttcgattaacctgttccttttggaagcatattgtacagtttagagcatcttcttggcagttggtacgcaattactgtgtgaacggatccagctgaggtagaaccggattttcatgcgtgatggtttgaactctggcaaccattctgctgtaggtaggcaaatgtgttttatcgggaacatatgggctccatatcaagcattcccctgccatggttctatagattaggtgaatctttgactgacgcttacttatactaacttcgaagcagcataataccttttattggtgttactgtggggcactgatgatgtgccagcactcaagaacaattttgtaattggtaattggtaagttccacctgagtataaaattctgaaggctaaatggttagtccttctcgtctttccatgacatttggtacagtcttgagcaggggggatgagagaaatgagctgtgctaaccaagataagtattctccgtctcctcaagcaggtattggtatttttgaattagcaattacaatattatcatcatcagttcatgtctcctgctttaagcaaagcatatatttttcatttcattccgaccttataattgcccacaaaactatcgtagactgacccgttatttgaaagctaactattttccctgtttggagatgctgcctgaatttccacttatttgtgagcaacatatgcctgcagataaaataatataaaaaggtatctatgctcattaattggtgctgaattgcacttatgtagacctacctcttggaagcctccccctagtacagttttcttagtacaggttaagattgaacttggctcataacagaaatcctctaacaagctttagccaaccttatacttgattgatttgtcctgcttcgcatttgccacgaagtgtgaaaccctattgagcatactggaaaatggtgatactccacctattaattactccctcccccaaaatataagattctagaattgagtcttgtccagaatcatagtattaggatgtcttatctggacacagattcttatattttgagacagagggagtagtcatgaattgccccttacatgcgcatagcttctgaaattcactgtgttgaataaatgcattaaaatggtgaagtttttgtacttatacgaaatctcctgctgattatggattgtttgtttccaggtcttacgaaatggaacggtttggaagcatggtgggcaatgaattctataaccctgtaaatctcatgtacagtagagattaacctgtttgttcattacagtaaacagaaccagcacctgcgcattgtcatttacccgaaaccaaagagattttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0347300, RefSeq:Os03g0347300