Difference between revisions of "Os03g0366200"

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(Created page with "{{JaponicaGene| GeneName = Os03g0366200| Description = CaMK1| Version = NM_001056714.1 GI:115453156 GeneID:4332914| Length = 7244 bp| Definition = Oryza sativa Japonica G...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0366200|
 
GeneName = Os03g0366200|

Revision as of 19:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0366200

Description

CaMK1

Version

NM_001056714.1 GI:115453156 GeneID:4332914

Length

7244 bp

Definition

Oryza sativa Japonica Group Os03g0366200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14867210..14874453

Sequence Coding Region

14867633..14867771,14867781..14868187,14870140..14870270,14871316..14871357,14871469..14871577
,14872099..14872177,14872274..14872570,14872657..14872769,14873212..14873319
,14873391..14873453,14873535..14873702,14873784..14873921

Expression

GEO Profiles:Os03g0366200

Genome Context

<gbrowseImage1> name=NC_008396:14867210..14874453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14867210..14874453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtctctgccatggcaagtcggcggcggtgctggagccaacggtggaggaggaggaggagggggcgacgcgcgtagccgaggccgcggcggcgccggcgaagccagcgtcgcctgcgccttcggcggcggcggcggcggcgaagcccgggacgccgaagcagcacaagttcccgttctacctgccgagcccgctcccggcgtcgagctacaagggctcgccggcgaactcgagcgtggcgtcgacgcccgcgcgcggcgggttcaagcggccgttcccgccgccgtcgccggcgaagcacatccgcgcgctcctggcgcggcgccacggctcggtgaagccgaacgaggcgtccatcccggagtccggcgagcccggcgtggcgctggacaagggcttcggcttctccaggcacttcgccgccaagtacgagctcggccgcgaggttggccgcggccacttcggctacacctgcgccgccacctgcaagaagggcgagctcaagggcgacgacgtcgccgtcaaggtcatccccaaggccaagatgactactgctattgccattgaagatgtcaggagagaagtcagaatattgagttctttggcagggcacagcaacttagtgcagttttatgatgcttatgaggatgaagaaaatgtatatatagttatggagttatgcaaaggaggtgaactgctggacaggattttggctagaggtggaaaatattctgaggaagatgcaaaggttgttatgcgccaaatcctaagtgttgcttcattttgtcatcttcagggtgttgttcatcgggatctgaaaccagagaatttccttttctcgtcaaaggatgagaactctgccatgaaggtcatagacttcggtttgtctgactttgtaaagccagatgagaggcttaatgacattgtcggaagtgcatattatgttgctcctgaagtgctccatcgatcttatggcactgaggcagatatgtggagcattggagtaatagtgtatattttgctttgtggcagccgtcctttctgggcacgtactgagtcaggaatattccgagctgtgctgaaagcagaccctagttttgaggaagccccatggccaaccctctctgctgaagcaaaagactttgtaaggaggctgctcaataaagattaccgcaagaggatgactgctgcacaagccctctgtcatccatggattcgtggtactgaagaagtgaagcttcctttggacatgataatttataggcttatgagggcttacataagttcatcttctttacggagagctgcattgagggcccttgccaagacattgacaacagatcaaatctattacctaagagaacagtttgaattgataggcccaaacaagagcgatcttattactttgcaaaatttgaagacggccttgatgaagaactccacaaatgcaatgaaggattctagggtggttgactttgttaacacaatatccaatattcagtacagaaagttggattttgaggagttttctgctgctgccatcagtgtttaccagatggaaggtttggaaacctgggaacaacatgcccggcaagcgtacgagttctttgataaggagggtaaccgaccaattgtgatcgacgagctcgcatcggaacttggattgggtccttcggttcccctacatgttgttctccaagattggatcagacatcctgatggaaaactcagcttccttgggttcatgaaactattgcatggagtttcttcgcgtaccatcccaaaaacctga</cdnaseq>

Protein Sequence

<aaseq>MGLCHGKSAAVLEPTVEEEEEGATRVAEAAAAPAKPASPAPSAA AAAAKPGTPKQHKFPFYLPSPLPASSYKGSPANSSVASTPARGGFKRPFPPPSPAKHI RALLARRHGSVKPNEASIPESGEPGVALDKGFGFSRHFAAKYELGREVGRGHFGYTCA ATCKKGELKGDDVAVKVIPKAKMTTAIAIEDVRREVRILSSLAGHSNLVQFYDAYEDE ENVYIVMELCKGGELLDRILARGGKYSEEDAKVVMRQILSVASFCHLQGVVHRDLKPE NFLFSSKDENSAMKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSI GVIVYILLCGSRPFWARTESGIFRAVLKADPSFEEAPWPTLSAEAKDFVRRLLNKDYR KRMTAAQALCHPWIRGTEEVKLPLDMIIYRLMRAYISSSSLRRAALRALAKTLTTDQI YYLREQFELIGPNKSDLITLQNLKTALMKNSTNAMKDSRVVDFVNTISNIQYRKLDFE EFSAAAISVYQMEGLETWEQHARQAYEFFDKEGNRPIVIDELASELGLGPSVPLHVVL QDWIRHPDGKLSFLGFMKLLHGVSSRTIPKT</aaseq>

Gene Sequence

<dnaseqindica>424..562#572..978#2931..3061#4107..4148#4260..4368#4890..4968#5065..5361#5448..5560#6003..6110#6182..6244#6326..6493#6575..6712#cacacacactcctcgccgtcttgtttcttcttcgtctgggtggttgatccatccatccagagattgcctgtgcgaggaagggagcgggcgagtggcggatttgtttttggtttgtttttgagtttgtttttattggtggtatcctctcctcctcctgtgcgaggagcagctggtggattgttcgttccagctccgtttcttgtcttgatttggaatccgggaaatttttccgcctcccgtttcttgatttccggtccccccccttccttggtggaagtgggaaggggagggggaaggattttttggtggggaattcgagggggcgaggtgatgaactcttgcctctttgaccagccttgattttcctggtgattttgcttggaatttctcggattttgtggggggttctttgatccgggctccatgggtctctgccatggcaagtcggcggcggtgctggagccaacggtggaggaggaggaggagggggcgacgcgcgtagccgaggccgcggcggcgccggcgaagccagcgtcgcctgcgccttcggcggcggcggcggcggcggcgccggcgaagcccgggacgccgaagcagcacaagttcccgttctacctgccgagcccgctcccggcgtcgagctacaagggctcgccggcgaactcgagcgtggcgtcgacgcccgcgcgcggcgggttcaagcggccgttcccgccgccgtcgccggcgaagcacatccgcgcgctcctggcgcggcgccacggctcggtgaagccgaacgaggcgtccatcccggagtccggcgagcccggcgtggcgctggacaagggcttcggcttctccaggcacttcgccgccaagtacgagctcggccgcgaggttggccgcggccacttcggctacacctgcgccgccacctgcaagaagggcgagctcaagggcgacgacgtcgccgtcaaggtcatccccaaggccaaggtcaatccaatccccttcttcttcttcttcttcttcttctatccagttcacgacttgttctccttcgctgaggttttgactcaattttcatgtttattttcctcgcttgggtttaattaattaatacacttaaaatcttctcctgcattgcttagcgtttacacctgattgaatttatattatatttgtgcttgaatgtattgtttaatgctagacttactttgggctgatgttttcaattttatgttcaaagcatcattgtgtgtggattcaacagagttacctcttgacctcatttggttcagttgccatgcttgtgtttttttagctcaattgctaaatatatcatattaggtgggagaaagagagacattacgaagtaggtttactaaatgcttccatgaggatttgttctggccattaatactttgatgaacaagttagttgcttcactcaacgcttacaaaggacagatagatgagaaaaatcacgtctccatttcgggtgtttcttgttgggtaatttgcggaggggcaatgttgctccattgaagcttgcttggtgctttacagcattggtttcaaaatgatggaatctgtttctccataatgtgcaagttctccgtatgtgaaaagcttgtgtagcatatttgcttcaagtgagccaaatggcgtcattgtctccttgagctctggtagtattaacatttttatcatcttatatttcattggctgtttagtcgtagagaactattaaatccctgagtcaaagtcaaagaattgttgtggtgttgcgcaattccagcctgtattgttattagctgcgaaacagcgttctattagttctattgaagtactttgccctttctaccataactttcaagtttcaacactgttgtagttgtagaccttcctatgtcttttggtgggaggtgtctaactactatcatatacttatagttgttgcctttctatacatcgatcatcatcttgttgtttatacaacatgttcagagtcttgacttacaattaatataatgcttttagttagggtctccctaccttttgcatgttaaaaaaatattgttgactgtatttcatgtatttatgctgttatctatcactttttggatatcagtgatactggttttccttatcgatctagtctagatatcctcctgtagtgctgtctcttgttgctcttctccttttgatgtttactctccttgataatgttaaatgatacataaaacaagcaattatagattatattgattagaaatgcatgtcttttattacgcctgttatattgttgtgcatatcattgtctgttgttatgtaactgtgcattgccaacactaatcccacgacattttttttgggtatctgtaattgatgtgttactctatgctttgtgctgtgcggtgcaatgttaatatatagaattgttggctgcgctcagagtatgcttgtatttctgcttgtggataagcatccttggtgcaatgctacttccaggccctagagccaaggcccatgcgtgcaacagttggttgatgaactacccaacatttgctgtgctatctagtctcttattgcttggctgaaaccacattgacgtggtgttgttacatgaaatgcggagttggacctgatcacctgactgattggcaaattcttatccaatgatgcagtaatcacctgactaattggctaacacatgtatttatatgagtagtatgatatagattttccattgttgtgtgtaataaacaattatttttaatcttattattgtgtaatttgattaataatactgtgaaattgctgcctttgacatctagttacatatatatgagtccactggaactccaattctttcttttttccaagagaaagtccaatttaagtaatactgctaaccagtctcacacaagcaacttctttcgacagatgactactgctattgccattgaagatgtcaggagagaagtcagaatattgagttctttggcagggcacagcaacttagtgcagttttatgatgcttatgaggatgaagaaaatgtatatatagttatggagtaagttcatagtttttccattcttcagtttaacctactgatctgctgaaagttataagtaatgactaaagttttgatattcttatgctaaataaacagaacacacaacatactaattcttctgtaggttaacacgaataacaattgttggttgtttttttatgacaaacttggtctcaagcgaacatgacatgctagcatgtgttttcatttcgccatttggtatcagtcattttgggaaggaaataaaaaatgacatattgatgcaataaattttctctatcatgtttaggttagatatcagtcgcgcgcagacatgatcacatgacatttcattttttagatacatgtgtttaggagctggcttgattggctggcgctgaccatactcatatgagacttggatgcttttgtagccagtgccagtcataatctgtaaataattctcaaacttggctcaatcacaatttactttttatggaaattgtgttttgtacaatcaattctgattgttagctccatcagtgaagcattttactcattaattgctattaaagtttctttctaatatggtacatgtttaagagattaagaggttataatccctttcactgtagacggttttaagggcctggcctcataagtcataaactatttcttagtatatacaaataaagtgtgcactattttaaacaagaatattaggggaggacccttctgattacaaagtaaacaggaatacaaaaagggaaaacatgtacacaagttaaggtccaaaaaagatagcaacagtttataaagctcccaccaaacaaatataggcagaaacactatatccataaagaaagctttcaaaattttcctagctactctatatccataaagaaagctttcaactgaattcaaatgtgtatcatttttttgtgtagtaaaatgtcccagaattcaactgtgataatctccttgaaatagggtgttgtgatacctgaaatacttccgtcaattgattattttcaactcactggaattttttcccttgatttaggttatgcaaaggaggtgaactgctggacaggattttggctaggtacttacagttatatcattttctgataccagcattgtttagaacaattgcttcattaattgtactaggattctgaaatctgaatataactgcatacatttttctttgcagaggtggaaaatattctgaggaagatgcaaaggttgttatgcgccaaatcctaagtgttgcttcattttgtcatcttcagggtgttgttcatcgggatctgaaaccagaggtaagtttgattcaagcaattcagatattgtttagatatttctcttttgtaccatttaattttcattcagttgggtgcctatgaaaaatcaaggctgtgggaaagttatctacatcgtacaacatgcttagtgatgtaagagcttataacggatagtttcttatgcatacattcttgatcctttcactctccttaggcttcgttcgttcctgccattggagggagttttttcagcgcacgcgaaatgagaaagattaatacatgattaattaaatattaattattgtaaacttgaaaaatggatttatttgactttttaaaataacttttatatagaacttttttgcaaaaaacacaccgtttaatagtttggaaagtgtgctaacggaaaacgaggaagttgaaatttgtattgagagtatagaacggggccttgttgtgcaaatactgctattattgttttcaagagcaattttgtgctgatgctaatgtttgcttgcgtttctacttgtgtcttgtagaatttccttttctcgtcaaaggatgagaactctgccatgaaggtcatagacttcggtttgtctgactttgtaaagccaggttagtctaacagattttcttaaaccttgtttagtaaaatgttttatgtttagctatttaactataggcacatctgaccatcattatattctgcagatgagaggcttaatgacattgtcggaagtgcatattatgttgctcctgaagtgctccatcgatcttatggcactgaggcagatatgtggagcattggagtaatagtgtatattttgctttgtggcagccgtcctttctgggcacgtactgagtcaggaatattccgagctgtgctgaaagcagaccctagttttgaggaagccccatggccaaccctctctgctgaagcaaaagactttgtaaggaggctgctcaataaagattaccgcaagaggatgactgctgcacaagccctctgtgagtaccataattatcttcagtttacactgtactaccagtcaactttgcagatgatgaatgcttttttgttctacacatttaaggtcatccatggattcgtggtactgaagaagtgaagcttcctttggacatgataatttataggcttatgagggcttacataagttcatcttctttacggagagctgcattgagggtaatatttcttttagggtgtattggtttgccctttactaatgatatttatctttattgccccaaattaatgtggaacaatgtcatttatataaattatgctgcatcgctttttagagggtaatttagtggtaaaatcaactttgcatagcaaatgacgttgttttaatgttcttatcattctttcttcagaatagtatgtatcgctaaccatgtgtagagcattattgcactttgcccattattttgtcatatatcgtgcaaatctgattgaatgagtaatataataaggtgatcttagaaaaatcctaaggatgctatattttctcccatattatgatctcacatttcctgtgtgcatttaccatggaatatcttgttgctgataatagtgctgtgctcactttaaaaactactactaagtagctgtttgtgttctgcaggcccttgccaagacattgacaacagatcaaatctattacctaagagaacagtttgaattgataggcccaaacaagagcgatcttattactttgcaaaatttgaagacggtgagttattttaccatttagactaaataactagtctgctatgagattgctaaagtacgctaaacctccaggccttgatgaagaactccacaaatgcaatgaaggattctagggtggttgactttgttaacacagtaagcctaaagtccttttctctctacttttcaaagtagcacctgcagttgtgtaatcacttaccctatcaatgatgccagatatccaatattcagtacagaaagttggattttgaggagttttctgctgctgccatcagtgtttaccagatggaaggtttggaaacctgggaacaacatgcccggcaagcgtacgagttctttgataaggagggtaaccgaccaattgtgatcgacgagctcgcatcggtatatgatccctaacactaaattagcttggggttgggcacgatgaaatgtttctcacaggtgatgacatactattttcaggaacttggattgggtccttcggttcccctacatgttgttctccaagattggatcagacatcctgatggaaaactcagcttccttgggttcatgaaactattgcatggagtttcttcgcgtaccatcccaaaaacctgagataataacttattttcttacatcaaccaaggcaaaagtgtgatgactaaactaatctctggctgtctggagaagcggcatggaaccagtacaaagattaacaaagctgtcctagtgtaacaagtgaaaaagctctcctgtcaggcccgcgaatttcgccttctcttaccagatgattgatgttgtgtttgtattcaggtttgtttagaggtgaatgtacagatgagtttaggaaacaggaaaaatgaggtgctaagaaagtgaaacatggtttaatttcgattggtgtaactgtgtgcgtttgatcttcgccgatctgtgaatgtcgtgattggactgaaattgagaagtgaggtggtatcagtaccatattcgtagatatttcttgagtttttttttcttattgaaatttactcgtgtttatttgcaacagtttggctcattggctgtacatcgatgtgatgaaaacggctgaaaacgatatcaatttttttttacataaacaatatcagtatggttaggaattttttat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0366200, RefSeq:Os03g0366200