Difference between revisions of "Os03g0372700"

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(Created page with "{{JaponicaGene| GeneName = Os03g0372700| Description = Low temperature viability protein family protein| Version = NM_001056741.1 GI:115453210 GeneID:4332942| Length = 413...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0372700|
 
GeneName = Os03g0372700|

Revision as of 19:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0372700

Description

Low temperature viability protein family protein

Version

NM_001056741.1 GI:115453210 GeneID:4332942

Length

4137 bp

Definition

Oryza sativa Japonica Group Os03g0372700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15221791..15225927

Sequence Coding Region

15221902..15222285,15222382..15222759,15223848..15224456,15224947..15225074,15225666..15225669

Expression

GEO Profiles:Os03g0372700

Genome Context

<gbrowseImage1> name=NC_008396:15221791..15225927 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15221791..15225927 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggaggaggaggaggagggcgcaagccacgcaacttcgccacgttccggctgttcccgcgcgccggcgccgccgaccccaacgaccgcgtcttcgtccgcgtcgacagcaacgactacaccgtccccggcttcggcgacgacgacgccttcgactcctcatccctctccctcaccggtgacgccgccgccggcgatcacttctcctccgcctccggccccctccccgaccacgtccgccgcgagatcctcgagctcggcctcccggacgacggctacaattacctccaccacctccgcgagctccgcccctccgccgccgccgccgcctcatccttcgcgcccaaccagactgccccgcctctccccctcgacgtgaaggcgtatgatgccagtagggtgcggattgcttctggcaatgttgaggatgagatggacgaggggaggacgatgtgtaaggtggccgcgaagacagcgcctgtgaggcggattgagagggcggttgatcctgacatcgcgaggttgctcgacgagaccgatgtctcccatggcgggtcggaggatgagggactggaggaggattttgtcatcatggcaaaccgggctgagggggatgaggaggaagatgatgatgatgaagaggaggaagtgatggatggtgtgttcttaagtgatgttgaagaggaagaggagtttgaggatgatgagggtgagcccaagccgagggtccggcggttgctggatgaacagtttgatttgcttgctttggaagaatatggtgacagtgatgatgatgatgatgatccaggtgttagaaatggggaatgtgaactgcctactgaggttattgatgaactgaaactgttccatagtcaaaatgtatctgtcacagaagaatatagaacgccggcagattttgttcgtagaaaattggattcaagcacagcagaggaggtggatgaatctgctaatgtaatccaaaaatgtgctgaatatgctgaaaggtatttaaatgaaactgctgaagaggaagaagttgtacttgtttcagaaagcagtgatgagtctgaagtttgggactgtgagactattgtttccacatactcaaatcttgacaaccatcctggaaagattcaaacaccaggaaatcctaaaaataggctccctaaagtttttcctggagaaacagctacaacgaaagatatcatcaggcttcaaggcaaagagagacttccagtagaatacctaccacagaggaaaagaaatggtgagaaggagaagaaagcaaagccaacagaaactccaagtgctgaaagttttaagaaaggagctcaaaaggaaacaaaggaggaaaagaaagcaagaaaggctgcagtgaaagaagagaagagagaagcacggaaagcaaagaaagagctgaaaggcctgtacaaatttgaaacacagaaggctcagaaggttgctgctgttacagggccagcttctatacggctaatgtaa</cdnaseq>

Protein Sequence

<aaseq>MGGGGGGGRKPRNFATFRLFPRAGAADPNDRVFVRVDSNDYTVP GFGDDDAFDSSSLSLTGDAAAGDHFSSASGPLPDHVRREILELGLPDDGYNYLHHLRE LRPSAAAAASSFAPNQTAPPLPLDVKAYDASRVRIASGNVEDEMDEGRTMCKVAAKTA PVRRIERAVDPDIARLLDETDVSHGGSEDEGLEEDFVIMANRAEGDEEEDDDDEEEEV MDGVFLSDVEEEEEFEDDEGEPKPRVRRLLDEQFDLLALEEYGDSDDDDDDPGVRNGE CELPTEVIDELKLFHSQNVSVTEEYRTPADFVRRKLDSSTAEEVDESANVIQKCAEYA ERYLNETAEEEEVVLVSESSDESEVWDCETIVSTYSNLDNHPGKIQTPGNPKNRLPKV FPGETATTKDIIRLQGKERLPVEYLPQRKRNGEKEKKAKPTETPSAESFKKGAQKETK EEKKARKAAVKEEKREARKAKKELKGLYKFETQKAQKVAAVTGPASIRLM</aaseq>

Gene Sequence

<dnaseqindica>112..495#592..969#2058..2666#3157..3284#3876..3879#gtcttgtcgcctcaaaatttcctctctcctcgccaccgtctcttctgtttacgagctcctctccaaatccccaaaaccctaatccagccagccgccgccgccgccgccgccatgggaggaggaggaggaggagggcgcaagccacgcaacttcgccacgttccggctgttcccgcgcgccggcgccgccgaccccaacgaccgcgtcttcgtccgcgtcgacagcaacgactacaccgtccccggcttcggcgacgacgacgccttcgactcctcatccctctccctcaccggtgacgccgccgccggcgatcacttctcctccgcctccggccccctccccgaccacgtccgccgcgagatcctcgagctcggcctcccggacgacggctacaattacctccaccacctccgcgagctccgcccctccgccgccgccgccgcctcatccttcgcgcccaaccagactgccccgcctctccccctcgacgtgaaggtctgcgacttcccttcccgaaaccccaattttcgtttctcctgctattcggttgtctgatgcttaggatgatatgctgttgttttgggcgtgcaggcgtatgatgccagtagggtgcggattgcttctggcaatgttgaggatgagatggacgaggggaggacgatgtgtaaggtggccgcgaagacagcgcctgtgaggcggattgagagggcggttgatcctgacatcgcgaggttgctcgacgagaccgatgtctcccatggcgggtcggaggatgagggactggaggaggattttgtcatcatggcaaaccgggctgagggggatgaggaggaagatgatgatgatgaagaggaggaagtgatggatggtgtgttcttaagtgatgttgaagaggaagaggagtttgaggatgatgagggtgagcccaagccgagggtccggcggttgctggatgaacagtttgatttggtatgcttcgtttgcattttgtgtttccttcagtatgatttcacatacaccatttttataggggcagtataactttccttccttttattctataggggcatattacgggactacccttatagctgcataagtttctaagtatttatgtgcttgtcaaatatatatttttagagtaaatttcataaaactacagatactatgaccaaattatcacaaaactacagatttaactcagtgtatcacaaaactacacatttaacaccaaatttatcacaaaactacacatttaagatgaagtgtcacaaaactacatgtttagtaactaaattatcataaaactataggtttagaaccaatttaatcacaaagtaataatgtttatagctccacataacaatggtgctagggatttaaactccaaaagttgtagttttgtgataagttcaatattaaatatgcatttttgtgatacttaacctaaaatctgcagttttgtgataaatttggtgctaaatgtgtagttttgtgatacaactccttaaatctgtagttttgtgataatttggtcaaaatacctgtagttttgtgaaatttactcatatttttatcattgtgtagatggtagatctgaagcttctagattgaagattacgcataatggatgactgtgttcatatataatgctggtcatcaaactaattgagcataccataccggatgctgtatcttgttcaactccctctagttggaagcgtatgttgttttagacatgcatccagttgactttcgaaacttcgaatatcaatacactatatagtatatttgtctcaagaactttcttgaatattatactttttacacggtctgatatacataatgcactaaaagttagtggtcaaactactgttctagatagtgtcccattgtccaaaattacatgtattttatgaattgagggaatcatcaccagacgcctaatcagtcatgtctttctacgattagaagttcatcgtgcaaatttggactcgtttgttttgcgaatcgcaaatggtatgcccaattctgacttgttgtgaatcaacttgcagcttgctttggaagaatatggtgacagtgatgatgatgatgatgatccaggtgttagaaatggggaatgtgaactgcctactgaggttattgatgaactgaaactgttccatagtcaaaatgtatctgtcacagaagaatatagaacgccggcagattttgttcgtagaaaattggattcaagcacagcagaggaggtggatgaatctgctaatgtaatccaaaaatgtgctgaatatgctgaaaggtatttaaatgaaactgctgaagaggaagaagttgtacttgtttcagaaagcagtgatgagtctgaagtttgggactgtgagactattgtttccacatactcaaatcttgacaaccatcctggaaagattcaaacaccaggaaatcctaaaaataggctccctaaagtttttcctggagaaacagctacaacgaaagatatcatcaggcttcaaggcaaagagagacttccagtagaatacctaccacagaggaaaagaaatggtgagaaggagaagaaagcaaagccaacagaaactccaagtgctgaaagttttaagaaaggagctcaaaaggaaacaaaggaggaaaagaaagcaagaaaggtaaaagagtggttttaggatattcttgcaatcatgtactgttattccttaaaacagtagagaataccgggaaagcattttaattgtgtttatttgattcatttggaggcttcaacggttgaccaaatgtatgctgcattatacctgcgacctatgtagtcatttcatcatttgtagtataaaaatcttgaagtactaatctttaagttgtctgtaggttcaagtttagtttaaacttttttcaagataaactagcgttaatttatggtacaacagttgcctagctattagcgtatttcttggtggttatgttgaattgataagtgttcttcaagattacaatgtgttcctagctggagcagtgttgtaaaatgatttgtaaatcggcttaatatggtgaaccacttttttttgttttaataatttttaaattgtttattggtatgtgtaacatccttgtcatctgggctgtttcttggtatacatgtaggctgcagtgaaagaagagaagagagaagcacggaaagcaaagaaagagctgaaaggcctgtacaaatttgaaacacagaaggctcagaaggttgctgctgttacagggccagcttctatacggctaatgtaagtcaccctgttgccacgttacaccatctgaaatgaatatgcccaaaggttttgacttattgctgctggaagaaatgaaaaagaactccgccactgtttgctccttagataaagaattcagcggtagtgttatgtcaagtgaaatgtagatatacccatcctgggtagtactatctactgcagaatatgatccaattgcaagtttgcaacaactttgatttgggcatcgaaacagctagaaagaaattcagaactcagaacagaagatatttgtgtagacagctcacgaagtgttgtcaccttttaatcttgagtgaattcttcccttcccatttacttgaattttattttgtcctgtttttgctgccaacatcaaaaacaattaagggaagagaattaagaactatatagttggcagtttctttgttgtttgatgttgtaaaaccaatttggtttcatgattgcacctagctctgctctgctttgcgctacacgttccttcttaggtttgatgtaaacactttttagtggatttatacaaatactctctactctctatactgatttgactcttttttacttgatcaggtaataaccatgttgatttgtaaacatgttctgcacgataacgacgcaatgtgagtcgtaaggagatcctcatcctacaaggtacgacggcaagatatgatacactgatacctcctgggtcatcttgtgccatgtttgtggtttttgtcgactagatacccagtgtataccatgtttggacttctgtatgagaaatatgtcgtgtaagacgtaggttatctaatggacacagtggcgctattttgaatgtgattttacactg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0372700, RefSeq:Os03g0372700