Difference between revisions of "Os10g0207100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0207100| Description = Protein kinase-like domain containing protein| Version = NM_001189139.1 GI:297727408 GeneID:9266040| Length = 5908 b...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0207100|
 
GeneName = Os10g0207100|

Revision as of 21:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0207100

Description

Protein kinase-like domain containing protein

Version

NM_001189139.1 GI:297727408 GeneID:9266040

Length

5908 bp

Definition

Oryza sativa Japonica Group Os10g0207100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:7322872..7328779

Sequence Coding Region

7322872..7322876,7323922..7324037,7325422..7326843,7326927..7328306,7328400..7328779

Expression

GEO Profiles:Os10g0207100

Genome Context

<gbrowseImage1> name=NC_008403:7322872..7328779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:7322872..7328779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggttggaaagtgatctggttttcttggatatcatcgttgatttgctgagcagctctttggacgttcggttcttcccctctgaagatcttcgcgtttctctgcagccagacacagaatgcatatccgctgttgtgttgatctctttgtccactatgattgctgcttcttcgggtctgagtatgagcaacagcagcaacactgacctcactgcactgatggctttcaaagcgcagctctccgaccctctcggcatccttggaagaaactggactgttggcaccccgttttgccattgggttggggtctcctgccgccgccaccggcagcgtgttactgctgtggagctgccagatgttcccctgcaaggagagctcagccctcacatcggtaacctctctttcctatctgtactcaacctcagcaacaccggcctcatgggttcagtcccggatgatataggaaggctgcatcgcctcaagatccttgatcttggtcacaatgacatgttaggaggtgtcccagccaccatagggaacctgacgaggcttgatgttcttgatctcgagtttaacagcctatctggtccaatcccagtagagttgcgtctctcgcacaaccttcgcagcataaatatccagatgaattacctcaccggcttgataccaaatggcctattcaacaatacaccttcattaaaacatctaatcatcggcaacaacagcctgtctggaccgataccaagttgcattggctccttgccattgctcgagcgccttgtccttcagtgcaataatctcaccgggccagtgccaccttcaatctttaacatgtctagactacatgttattgctcttgcctcaaatggcttaactggccctatcccaggcaacaaaagtttcatcctcccgattctgcaatttttctccctcgactacaattatttcactggtcagattccactagggcttgcagcgtgtcggcaccttaaagttttttccctgcttgataatttgattgagggtcctttgccctcatggctgggcaagttaaccaaactcaatgtcatctccttgggtgagaatctccttgttgttggtccaattcgagatgcactaagcaacctcaccatgctgaatttcctagacctcgcaatgtgcaacctaacaggagccatcccagcggatcttggacagataggccatctttcagtcttgcgtctttcaacaaatcaactaacaggacctattcctgcttctcttggtaacctgtctgcattatctgtcctgctattggatgacaaccacttggatggtttactaccaacaacaattggcaacatgaactcattaacagaacttattatttctgaaaacggcctacagggggatctcaatttcctttctgctgtttcaaactgtagaaagctttctgttctatgtatcaactccaatcgtttcacgggaattctcccagactacctggggaacctatcaagtacgctggaatcattccttgcatccagaatcaagttaagtgaatcaatcatggagatggagaatctccatatgcttgatctcagtggaaataacttggcgggctccatcccatcaaacacggcaatgctaaagaatgtcgtaatgttgttccttcaaaataacgaattctctggctccataatagaagacattggcaacctcaccaaattagagcacttaagattatctaataatcaattatcatcaacggtaccaccgagtttatttcaccttgatagcctcattgagttagatctgtctcgaaacttgttcagtggtgcattgccagttgatataggtcatctgaagcaaatttacaagatggacctctctagcaaccactttcttgggagcctgccagattcaattgggcaaattcagatgataacctacttgaacctatccattaattcattcaatgattcgattccaaattcttttggtaacctgactagcttgcaaactttggatctatcgcataacaatatttctggtaccatcccgaagtacctgtcaagttttaccatgctcgctagcttgaacctatctttcaataatttacatggtcaaataccaggaggaggtgtcttctcaaacatcactttgcaatctttagtggggaactcagggttatgtggtgttgtccgtctaggatttgcaccgtgcaaaacaacctatcccaaaagaaatggtcacatgctaaaatttttactccctactataatcatagtagttggggctgtagcttgttgcctatatgtaatgattagaaagaaagttaagcatcaaaagatttccactggtatggttgacacggtcagccatcaattactctcctaccatgaactagttcgagctactgataatttcagtaatgataacatgctggggtctggaagctttggaaaagtttttaagggccagctgagcagtggtttggtggttgctataaaagttatacatcagcatctggaacatgccgtgagaagtttcaatactgagtgtcgtgtgcttcgaatggctcgacatcgcaacttaataaagatagtgaacacttgttccaatctggactttagagcactagttcttccctacatgcccaatggaagcttagaggcactcctgcactctgaaggaagaatgcaattaggttttctccaaaggttggatattatgctagacgtatcaatggcaattgaatacctgcaccatgagcactgtgaggtgatcctacattgtgacttgaagcctagcaatgtactatttgacgatgacatgacggctcatgtatcagactttggcattgcaaggttgctgttaggtgatgacagctccatgatctcggcaagcatgccaggtacagttgggtacattgcaccagagtatggagctcttggaaaagcatcacggaagagcgatgttttcagctatggaatcatgctgcttgaagtgttcactggaaagagaccaacagatgcaatgtttgtgggagaactgaacaacaggctgtgggttagccaggcatttcctgcagagctcgtccatgttgtggacagccagcttttgcacgatggctcatcttctactactaacctgcatctgcatggcttccttgtgcacgttttcgagctgggtttgcactgctcagctgactacccagagcaaaggatggcgatgcgtgatgtggttgtgacactgaagacgatcaggaaggactatgtcaactggatggtattaatggggagcactgcccagcagtga</cdnaseq>

Protein Sequence

<aaseq>MERLESDLVFLDIIVDLLSSSLDVRFFPSEDLRVSLQPDTECIS AVVLISLSTMIAASSGLSMSNSSNTDLTALMAFKAQLSDPLGILGRNWTVGTPFCHWV GVSCRRHRQRVTAVELPDVPLQGELSPHIGNLSFLSVLNLSNTGLMGSVPDDIGRLHR LKILDLGHNDMLGGVPATIGNLTRLDVLDLEFNSLSGPIPVELRLSHNLRSINIQMNY LTGLIPNGLFNNTPSLKHLIIGNNSLSGPIPSCIGSLPLLERLVLQCNNLTGPVPPSI FNMSRLHVIALASNGLTGPIPGNKSFILPILQFFSLDYNYFTGQIPLGLAACRHLKVF SLLDNLIEGPLPSWLGKLTKLNVISLGENLLVVGPIRDALSNLTMLNFLDLAMCNLTG AIPADLGQIGHLSVLRLSTNQLTGPIPASLGNLSALSVLLLDDNHLDGLLPTTIGNMN SLTELIISENGLQGDLNFLSAVSNCRKLSVLCINSNRFTGILPDYLGNLSSTLESFLA SRIKLSESIMEMENLHMLDLSGNNLAGSIPSNTAMLKNVVMLFLQNNEFSGSIIEDIG NLTKLEHLRLSNNQLSSTVPPSLFHLDSLIELDLSRNLFSGALPVDIGHLKQIYKMDL SSNHFLGSLPDSIGQIQMITYLNLSINSFNDSIPNSFGNLTSLQTLDLSHNNISGTIP KYLSSFTMLASLNLSFNNLHGQIPGGGVFSNITLQSLVGNSGLCGVVRLGFAPCKTTY PKRNGHMLKFLLPTIIIVVGAVACCLYVMIRKKVKHQKISTGMVDTVSHQLLSYHELV RATDNFSNDNMLGSGSFGKVFKGQLSSGLVVAIKVIHQHLEHAVRSFNTECRVLRMAR HRNLIKIVNTCSNLDFRALVLPYMPNGSLEALLHSEGRMQLGFLQRLDIMLDVSMAIE YLHHEHCEVILHCDLKPSNVLFDDDMTAHVSDFGIARLLLGDDSSMISASMPGTVGYI APEYGALGKASRKSDVFSYGIMLLEVFTGKRPTDAMFVGELNNRLWVSQAFPAELVHV VDSQLLHDGSSSTTNLHLHGFLVHVFELGLHCSADYPEQRMAMRDVVVTLKTIRKDYV NWMVLMGSTAQQ</aaseq>

Gene Sequence

<dnaseqindica>1..5#1051..1166#2551..3972#4056..5435#5529..5908#atggagttctctaaatatactttaagatcagtgctatacgtactaaaagtttcttataaaactcttacaaacaaatatcttaaccattaatttatttactcagttggtagttatgaaaaatcaagatacaagtacatcatgccatataagttctaaagagtcagtaagattctttttggtatgtgtcattttccatctttaaatagtgtatcatccatcatgttagaccagattctattttagtgatactaggaacatgacgtacaattaactttgccaactatgtgaaaaaaaatgaagcatcattccagttgttacctaatgtaattctgatttctgtattagcagctgtctaattatgtttttttcttcacttaatttataaactttaattagaattacatcctaatgatagcatctccttttgtgtacagttgcacttcaagggtttagcagaattactcaaaacatttcctgtaactaatgaatttgacaaaaaaaattgtaagagatgttgatggtcttgtgatttaaatccttaagtatgtctttaataacctggaataatctacaccaatttttgtagtgttatttattccattagtaaaagttggtgtgcattcatgaattaaatatcaaacgatgtttgacaattattcttaccatttgacagatgccactgggcagataattaaattattgtttaaattttcatgaacttgatatatttacgcaggttgatgttccatcgaaaacatagggtcctcaaacgttactactaacacgaaggtgtaaaaatgccagtgccctcttatatgtcaaattgaacataaatcactgcgagcaacaattattctccctgcatccaggtaatctacatgtttttttttacgtgaaagcggcaagagtattgccgaatatattagaaggagaagtgcgggttgcatagttgttacaagtggactattacagtatgaatgtaagcaactcacagaggtaaaagctgaaaatatcagcatatcgcagcttataacaaccgaatcgttcaaggaggttggaaagtgatctggttttcttggatatcatcgttgatttgctgagcagctctttggacgttcggttcttcccctctgaagatcttcgcgtttctctgcagccagacacaggtaatctatatgtcaatctgcaattacatacaaatataacacaacactgaaagcaaaactcaaacagtatcaatcaatgaccatctaggttgacggagtcaaaggcatctgtttcggttgttgctgataggtttcatgtcatttttttcagataatgaataggtttcataccagtattagtatagcttttcgaatctaagtaccaatttgtggtttccaacaatcaggttcaaatctagatacaaatttgtaccgtacagcatttaggttaattggttaatcatgtttagaggggcaacgtgaaaaacacaagcatacttggtttgtggaaaaggttgattctgcactagtatttacatcactttccagtccaacttttacacttttgagtgggctagatgggagaggaaacttaatcacggagtgttaatgtgtgtgttagttggcagtaaaaagatactgttatcagcctgggcttaaattgacctgttttgatatttcagaatatttgataaatgcgaacttaatttttgaagtccttagtataatttaaaattctgactaaccaaacttaaaaccttataatcatacaatatattagaaaccaaatttatttaggtacacttaaattccgcaaatcatatactggaccttggatgtgttctgttatgttgcttgcatccatgccatgcaaacattagtgttgccatgttagctcttgacattgctcactcatgaccaacatactaagcatgcaaatagttttgttgtgaaactacctctaaacgatgcaatgctagaaccaaggtatgtattacgaaaaaaaaaaagaaccaaggtatgtatttacctcttcagagataagtgcctaagtggagcgtgtcagaaaaattcttttcagtaagcgcttgcatgtctgcctgccacaaaatggggcatgaatctcccaagatatctttcaccactttcctacttgcatttgcatggcatgtcatacactccggaataatctgttgaatagactttttgtgatggctttgatttcttttgaaacaacttgatgtctttattttccaatctaccagcgcctacaagcttctggtcctaacattacgtttacgattagtgctttgtgcacttgcttttcttttcattttgaatgggaacagtaggaaaggatcctactatagtttcctgcacaatctcactcgggtaatcgggttgaccaattgtcaaggtcttgggtgtagaacgcaccatttgcttgcatgcacgatggaatgggtagataaaacattaaggcctatatatgcagccccgagaagtaacactgtcttgttgccaatgcatcatacacactgagatatggcgcttggatttccagaatgcatatccgctgttgtgttgatctctttgtccactatgattgctgcttcttcgggtctgagtatgagcaacagcagcaacactgacctcactgcactgatggctttcaaagcgcagctctccgaccctctcggcatccttggaagaaactggactgttggcaccccgttttgccattgggttggggtctcctgccgccgccaccggcagcgtgttactgctgtggagctgccagatgttcccctgcaaggagagctcagccctcacatcggtaacctctctttcctatctgtactcaacctcagcaacaccggcctcatgggttcagtcccggatgatataggaaggctgcatcgcctcaagatccttgatcttggtcacaatgacatgttaggaggtgtcccagccaccatagggaacctgacgaggcttgatgttcttgatctcgagtttaacagcctatctggtccaatcccagtagagttgcgtctctcgcacaaccttcgcagcataaatatccagatgaattacctcaccggcttgataccaaatggcctattcaacaatacaccttcattaaaacatctaatcatcggcaacaacagcctgtctggaccgataccaagttgcattggctccttgccattgctcgagcgccttgtccttcagtgcaataatctcaccgggccagtgccaccttcaatctttaacatgtctagactacatgttattgctcttgcctcaaatggcttaactggccctatcccaggcaacaaaagtttcatcctcccgattctgcaatttttctccctcgactacaattatttcactggtcagattccactagggcttgcagcgtgtcggcaccttaaagttttttccctgcttgataatttgattgagggtcctttgccctcatggctgggcaagttaaccaaactcaatgtcatctccttgggtgagaatctccttgttgttggtccaattcgagatgcactaagcaacctcaccatgctgaatttcctagacctcgcaatgtgcaacctaacaggagccatcccagcggatcttggacagataggccatctttcagtcttgcgtctttcaacaaatcaactaacaggacctattcctgcttctcttggtaacctgtctgcattatctgtcctgctattggatgacaaccacttggatggtttactaccaacaacaattggcaacatgaactcattaacagaacttattatttctgaaaacggcctacagggggatctcaatttcctttctgctgtttcaaactgtagaaagctttctgttctatgtatcaactccaatcgtttcacgggaattctcccagactacctggggaacctatcaagtacgctggaatcattccttgcatccagaatcaagttaagtggtaaacttcggcaaccatttctaatttaactggcctcaagctgctagatctttcggaaaaccaactgtttagtgcactaccagaatcaatcatggagatggagaatctccatatgcttgatctcagtggaaataacttggcgggctccatcccatcaaacacggcaatgctaaagaatgtcgtaatgttgttccttcaaaataacgaattctctggctccataatagaagacattggcaacctcaccaaattagagcacttaagattatctaataatcaattatcatcaacggtaccaccgagtttatttcaccttgatagcctcattgagttagatctgtctcgaaacttgttcagtggtgcattgccagttgatataggtcatctgaagcaaatttacaagatggacctctctagcaaccactttcttgggagcctgccagattcaattgggcaaattcagatgataacctacttgaacctatccattaattcattcaatgattcgattccaaattcttttggtaacctgactagcttgcaaactttggatctatcgcataacaatatttctggtaccatcccgaagtacctgtcaagttttaccatgctcgctagcttgaacctatctttcaataatttacatggtcaaataccaggaggaggtgtcttctcaaacatcactttgcaatctttagtggggaactcagggttatgtggtgttgtccgtctaggatttgcaccgtgcaaaacaacctatcccaaaagaaatggtcacatgctaaaatttttactccctactataatcatagtagttggggctgtagcttgttgcctatatgtaatgattagaaagaaagttaagcatcaaaagatttccactggtatggttgacacggtcagccatcaattactctcctaccatgaactagttcgagctactgataatttcagtaatgataacatgctggggtctggaagctttggaaaagtttttaagggccagctgagcagtggtttggtggttgctataaaagttatacatcagcatctggaacatgccgtgagaagtttcaatactgagtgtcgtgtgcttcgaatggctcgacatcgcaacttaataaagatagtgaacacttgttccaatctggactttagagcactagttcttccctacatgcccaatggaagcttagaggcactcctgcactctgaaggaagaatgcaattaggttttctccaaaggttggatattatgctagacgtatcaatggcaattgaatacctgcaccatgagcactgtgaggtgatcctacattgtgacttgaagcctagcaatgtactatttgacgatgacatgacggctcatgtatcagactttggcattgcaaggttgctgttaggtgatgacagctccatgatctcggcaagcatgccaggtacagttgggtacattgcaccaggtactataccatactcgtagcttttttactctttcaagtttatcttttttactgccattgagtggtttattactaactttttttattgagtagagtatggagctcttggaaaagcatcacggaagagcgatgttttcagctatggaatcatgctgcttgaagtgttcactggaaagagaccaacagatgcaatgtttgtgggagaactgaacaacaggctgtgggttagccaggcatttcctgcagagctcgtccatgttgtggacagccagcttttgcacgatggctcatcttctactactaacctgcatctgcatggcttccttgtgcacgttttcgagctgggtttgcactgctcagctgactacccagagcaaaggatggcgatgcgtgatgtggttgtgacactgaagacgatcaggaaggactatgtcaactggatggtattaatggggagcactgcccagcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0207100, RefSeq:Os10g0207100