Difference between revisions of "Os03g0381100"

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(Created page with "{{JaponicaGene| GeneName = Os03g0381100| Description = ab initio prediction with EST support| Version = NM_001056774.2 GI:297601002 GeneID:4332977| Length = 8073 bp| Defi...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0381100|
 
GeneName = Os03g0381100|

Revision as of 19:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0381100

Description

ab initio prediction with EST support

Version

NM_001056774.2 GI:297601002 GeneID:4332977

Length

8073 bp

Definition

Oryza sativa Japonica Group Os03g0381100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15657593..15665665

Sequence Coding Region

15657593..15657673,15657797..15657862,15658569..15658652,15659034..15659113,15659551..15659596
,15659694..15659804,15661253..15661327,15662291..15662414,15662755..15662856
,15662955..15663023,15665586..15665665

Expression

GEO Profiles:Os03g0381100

Genome Context

<gbrowseImage1> name=NC_008396:15657593..15665665 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15657593..15665665 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcgggaggcgatggtgaggcggcggtgatgcgggcggaggtcgccgcgctccggctccgcgtacaggagttggagagggagaaccagaggctgggtaagattgcttcgagatgcacctgcggcagctccaaggacgacagtgctgcttcctctccagtagttagtgaaagtttgtccagcagtaaacaagaaccacagaagaacgtaaagtcacattgtagaggttgccaagtgggggttgtaagtcactgcccaaagcgattaattgctctgaaaatcatgtactttggtcagagattttatggctttgcttcagaagcccacacagagcctacagttgagtctgagatatttaaagcacttgaaagggcgaagcttctggttggaagtaggaaagaatcatgttattctaggtgtggaagaactgataagggggtttctgctactggacaggaaatgcagaaggctgcattaaaattcattggcgaacatgactacaggaatttctgtaagatggatgcagcaaacatagttgattcattattggatattaccaaaactcctagaaaacctcaatacaagatggcatcagagattccattgattctgcgatcctgtctgtttgatgaggtcaactttatgtgttcatcagaggccagtcaagctttgattgagcacttgaaagatgaatatcatcagtatatgctccaggctgcaatattttgtgaggcattgtcctgtttatgttctccagagcctgatccatttgaacctcgtcacaagaagaggaatcatattcctctaatgtcacgacaaacagaacatttgattctttttgattcatatattactgacatgtctcgttgtttcgcctacgtcaggaacttccgtcatgacatgtga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAGGDGEAAVMRAEVAALRLRVQELERENQRLGKIASRCT CGSSKDDSAASSPVVSESLSSSKQEPQKNVKSHCRGCQVGVVSHCPKRLIALKIMYFG QRFYGFASEAHTEPTVESEIFKALERAKLLVGSRKESCYSRCGRTDKGVSATGQEMQK AALKFIGEHDYRNFCKMDAANIVDSLLDITKTPRKPQYKMASEIPLILRSCLFDEVNF MCSSEASQALIEHLKDEYHQYMLQAAIFCEALSCLCSPEPDPFEPRHKKRNHIPLMSR QTEHLILFDSYITDMSRCFAYVRNFRHDM</aaseq>

Gene Sequence

<dnaseqindica>1..81#205..270#977..1060#1442..1521#1959..2004#2102..2212#3661..3735#4699..4822#5163..5264#5363..5431#7994..8073#atggcggcggcggcggcgggaggcgatggtgaggcggcggtgatgcgggcggaggtcgccgcgctccggctccgcgtacaggttcgcggaccagcgttcgttttttcctttttctcttcttgcgcggctgtttcggtggatttagtgaagttgtttcttctctttttttttctctactggtgaattataattgggtgtgattaggagttggagagggagaaccagaggctgggtaagattgcttcgagatgcacctgcggcagctccaaggtgagatttcttttatccttagtactgccattttcattcatctaatcggagccatttcgagctgtcctgaatggtgattgatagtttgacgattccatctagtcgttggtgcaccattgcttccaaaaaaactagcttgttctttgtagtttagtacatatatagtgaggtaaccttgtaataagagaggataacggtagctagaaatccttgtccggagaactgcacattttcgaggtgaactcatgcaagagtattgcctgtaattcttttttatcctaacacatcgattttctggtcacgaaaagatgatagaatagtaatgctttggttgctgtcatggattggatggatcacacttactaccagaaagttcccttttctatcttcccactaggattatattcctgattgttcaaatacatgctgaagtttggtttgaaataaaaattgataaatctagattacagtaccccaaaagtgtcactcagcaagttttatggcattagtcaagcatgaccccaccatatgctaacaaaaacctgcatctgtggctatacctttatagctagatatcttggagttttgatgatgttatcatgttgatatcatttctagaagaatgcttatgtactgcatccctcacctgttatcatttgtcatgaggttcttctctgttaacatttttcctgattttcttctgtaggacgacagtgctgcttcctctccagtagttagtgaaagtttgtccagcagtaaacaagaaccacagaagaacgtaaagtcacatgtaagtgtaacttcagaccataatgtcatattttaatttgatcagatggttccacaataacatctaccataatcacataatggagttttgctttcttatcttatctgagtcatatgcatacaatcgaattatagtgcaatggtattgtggaatacaatagttcatgcacatatgcaacttaagatacactaagtttctataggtaaggatagtcatttgtttactagaaggaactctgtttgttgtcatttttgcatgtaaatatattagatgtgtatgtctccattgagattaatggagcatatttttcacctatactaaaacattaattttctaagaaaacttctgtctaatattacctgttttttttcttgtgtttagtgtagaggttgccaagtgggggttgtaagtcactgcccaaagcgattaattgctctgaaaatcatgtactttggtcagaggtatgattttatttccaatacaaaaatcatgtgtttccttcatctgtgatgctttcttgcttaaactccgatacaatcccaatattgtgctagcttctatgtgatgaagataagaagattgcattaaaatcctgctactatgtgatcaaatataggcgtactatatgtgtatatgcaacagctttaagttaggaacctcttcactggtcacagatcaaactttgagtcaataatattaacacatgtttcttctgcaaaattgcaatatgttctcctggcacctgcaaaattgagtcaataatatcaaactttccaatccaagaacttctgctggcacctgcatccgttctctttactttgttagttcttattgctcgtggcctcgtgccttgtctcttttctcatttttttctgcaaatatgcttgttctcatgcagattttatggctttgcttcagaagcccacacagagcctacagttgaggtatattttttttcctacgaactacatatcagcttatttttgtttctctaagggcgtctaaggttttccattaatactcctaccttttctgttccagtctgagatatttaaagcacttgaaagggcgaagcttctggttggaagtaggaaagaatcatgttattctaggtgtggaagaactgataagggggtttctgctactggacaggtacttgaatgtgtatggtttgttcaatgctagatgattatattatgttttcttcttgtatataatataagcttatattactcatagtagtctcagatgtgatcacgaattatttttgtttctggttttatttttaagaagcactcttctggtctttctcatcagaaagtcatatttttcatgtgctactttcttgctactgactagtgattaatacaattatgtactgtgattaatacaagttcacttttctctgtcatggaaaataccgcataaaaaagttcataacccaaaatccctttttatacataaccatcaaccttttacattccacaatgcaacggttgacctcaaattttaaataatagcctgtaatggaagaaagaaatctatgtagaagtatcttcacaaccaatcagtatgtcattttgatgtgctcgatgttaaatttctgaagacatacgtcaaagatatttaagtgctactgcttgcatgcaataggtacactattttttaggaatctagatagtaattttgtattgcaatagtgtttgatgatttttgcatggtgcagaaatgagtgcaatatggaaaatgtgagatatgtctatgcactaaataaaatttgtttcctcatcctgcacctgcaacatgcaggtaatttccttatttctgcgatccaacataaaagatgccaaattggatgtactagacaacaaatctggtatgtttctgccttctattctttgcagctctctagcagtgaaaacagcatgtaattcagatttaatttgctgcttaactatactgtgaccctgctagtgggaaatttccctgaccttctcccaacaagagcatgtcttgtgttgttttcctatttctacctgtcatttcatttcaaatgtcaaacatcttggatcctgcctatgcttgcagtggtttcggcaaactaagagttgtgctttgttttcagaaattgattatgtaaaagtattgaatagaatccttccacacgatatacgtgtaattggctggtgtcccgttgcaggagattttcttgcaaggttagtttcagctctatgtatactttgtttttgttggaaatattaaaggcactctcactcaagtctcatcccattgataaatataagttctaagaaaagagattgcgtgtttatttgttgatttattcccttcttttgaagataaagcatttaattttttcttctattctactgtatcatcttgcactttatgttcctatgtctgatagaatcttatcttcccttactgctattttgtagattctcttgtttgggcagggaatataagtacctgttttggaagggcgacttgaatatatcggtaaatatgccattccttgatttctataattgttaacttgtccatgttgagttcttgacaagctgacttcaaactgtcaacaggaaatgcagaaggctgcattaaaattcattggcgaacatgactacaggaatttctgtaagatggatgcagcaaacgtgagtaactacaggcgacatattacagattttaatatttcagcctatgaccaaaggttaaatttgcattttaatcaaaactcttttatccataaatgtgtgagatgcttgccatacctgaattaaatcatggaagtgctttatatcttcaaggtctaactatgatgagctgtgggccatcacaatcaaggggagtgccttcctgtggcatcaagttcgctgcatggtagctgtgctatttcttattggtcaaggtcttgagacaccatgtgtaagtaaaatcgctcctaagcttttttttttctcttaataggttattgtatggtatattggtatatgccgttaaagttggcacagactttccctttgggccttaggtatgtaagctacatatctttaggcccatataggttcctatacttgcattgcatggatgatttcacttggcactgattggtgcaattttaggtctcttattatcttagccaatgcaagttcatggatgcacattgagttaacgagttcatggccaaccgccaaattggaatacacatgcaagtttaaagacctgatgtaaaagtattctttattacttggctggaatttttagggttaatcccctttagatatttcttattgcttaacccataatacaatataggctacctttatatactgaggtgtgtctagataggggaaacggaaacaaactagtaacctgatactactaggactctgttggactcttataacagaactaggaaactctaatagagagcttatttggattctccaaatgctacagcacttgccaatccgacttatctctattatgacactgctgatatactataccataacatccagccacaacaacaaagaaatctttcagacttgcacacgttttttttctttcgattattacatttgctgtttttccttttctttttatttttgcaacagatagttgattcattattggatattaccaaaactcctagaaaacctcaatacaagatggcatcagagattccattgattctgcgatcctgtctgtttgatgaggtcaactttatgtgttcatcaggtattcatactttggccatgtctgtctgaagttgtattgaaatatcatcagttcattttctgtcaataattaattgcattgtatatttttgcctgagttatttcagactgaatgtaaacagcagcagtgaaatatggttctttcagagataatataatagacagccatgaatagttgtttcatagaacttgtgtatgcaaagcaatttaagtttttcatttgtaaagaaaatatcttttgggttcaaaatccaccctctacagtttttgctgcctgttcgcatatatttctagctttttcatggtgtaattaattgtgatgcaacattgttccattttagaggccagtcaagctttgattgagcacttgaaagatgaatatcatcagtatatgctccaggctgcaatattttgtgaggcattgtcctgtttatgttctccaggtacattcatgtaaaccttttccatttttccagaaggctaagatcctttctcagttttatgccatttttagtgaactaaaagtgagatgtcattgcagagcctgatccatttgaacctcgtcacaagaagaggaatcatattcctctaatgtcacgacaaacagaacgtaagtaattgttatatagttctttacttccaacacatttttgttaatatgttttcctaaggacaagcaaatgttttatttggttatgccagcctcttggtttactcttcgacattctgacagtcctaccgttagttttctgtcattagtttattgtgctgcaactgttaatagccttgcctataaaatgccatcagttgtgcacatatgatatgttggtgcggtgcttagttttgattctttccttgtttatctgcttccaagtgaaactgagtcgccttcttgtttcagcttcgtatgaggaacggatagcaaaggtcaaaacaaagtcagcttgtagtgtgtagttacgtggctagcttcagtatcgcatcaagagtttcaaacgatgggtgaatccttcaaggatcagtgctgcatagtgtcatagtcatccaactccaaggtaaatttcccaagagatctctttgtgtgtgttcaatcacgagaagtatgtttgatgatcacttacctgaagttttcaagctgatgcctatgcattctcagtggtttacttattcaggggcaatgtctaaatccataaagtttgggttctcgatatgtggcgatttaaactgacaaaggacaattggtggcattttatcagttcatacagcaatatgcaccatcctctgctggctattctagccttctgggtacaggacataatgctagggaaggccatgttgtgcattgcattttgagtatgttgtaaaatacttccaagtcatgtagaacaacacatatcagatccttagttccttacatacatctgtagcagaattgtgctacctccgtttcaaattatagcaatctagaattgaattagatgcatactagtactatgaatctgcgtagtgggtgtgttcagattttaattctttctttgttatattttgggtggagggagtatcaacattcaattttccctccactttaatgctaagagcccctttgaatcgcagggtaaaaaaaacagatgaataggaaaaacacaggatcttgacaggaattgaagtgtaaaacagaggattgcaaaacacaggaaaaacacaggaatggtcgtttgattggagtacaggaaaacgcaggaatcggatgagagagatggactcaaaggaaatttttcaagaggttggagctcttgctaaatttcctccaaaatccacatgcaatgtgccattccataggaatttcataggatttggaaagcttcaatcctttgaatcaaagggccaaatatgaaaatttcctataagatttgaatcatataaaattcctacataaatcctttgattcaaaggggccctaatatgaatcagatgaatatcggtttgtctagttcatattatatttcccctggagggacagaatgtttcggtaacatggtcgctaacgtaatgcagttatgatggatacttgcagttgcatctaagcaatgttcgattgttaaggggcaaaaagtacttagctctccatgccgttgcttgtacagtgattactagctgcaagatggcgaccatttatttactcttgctaaattcagtgtcatgtggtggttggctcgtgctactacttaccccataccgtcttctgaaatgctagtacatatgctctattgggtcttgatttttttttcttttctcctgcctaagataagcaagtgaaaaatacaacgaagtattaccaagcaatgaaaaataggccaacgatacacaaggctttgttgcccacgttgagtttagggggtgtttagataggaatgtaaagttttggcgtgtcacattggatattatatagggtgtcgcatggggtgtttgggcactaataaaaaaactaattatagaatccaccagtaaaccgcgagacgaatttattaagcatatttaatctgtcattagtagatgtttactgtaacaccacattgtcaaatcgtggagcaattatacttaaaatattcgtcttgcaaattagtcgcaatctgtgcaattagttatttttttagcctatatttaatacttcatgcagatgtttgagtgttcgatgtgatagggtgtaaaattttagggtggaatctaaacaggcccttagtgtggtatgcaatacctgaaatgactcccaacacagctatcacagtggcaattgtcactctcgtactccctctgaggcctggtttagttcccaaaattttttttcctaaaaatatcacattgaatgttcggacacatgcatggagcattaaatgtagacaaaagaaaaaactactccgtaattgcacagtttgcatagaaatcacgagacgaatcttttaagcctaattgcgtcatgatttgacaatgtagtgctacagtaaacatttactaatgacggattaattaggcttaataaattcgtctcgtggtttccaggcagaatctgtaatttgttttattattagacaacgtttaatactttaaatgtgtatctgtatatccgatgtgactccccaaaacaaaaatttttacctactaaaccggccatgagatttgattctttttgattcatatattactgacatgtctcgttgtttcgcctacgtcaggaacttccgtcatgacatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0381100, RefSeq:Os03g0381100