Difference between revisions of "Os03g0392600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0392600| Description = Peptidase S10, serine carboxypeptidase family protein| Version = NM_001056820.1 GI:115453368 GeneID:4333028| Length ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0392600|
 
GeneName = Os03g0392600|

Revision as of 19:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0392600

Description

Peptidase S10, serine carboxypeptidase family protein

Version

NM_001056820.1 GI:115453368 GeneID:4333028

Length

3761 bp

Definition

Oryza sativa Japonica Group Os03g0392600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16314506..16318266

Sequence Coding Region

16314683..16314760,16314873..16315005,16315099..16315151,16316063..16316113,16316237..16316306
,16316640..16316824,16316913..16317018,16317148..16317215,16317298..16317585
,16317685..16317792,16317880..16317977,16318085..16318259

Expression

GEO Profiles:Os03g0392600

Genome Context

<gbrowseImage1> name=NC_008396:16314506..16318266 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16314506..16318266 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaccgccgcgagttcgcgctctttctgctgtatctgaagatggacacacacgctcttcctctgctctgcatcctctgcctcatcacccttcttcagctcgacggcggcgctgccatctccggcggcaccaacgacggctccgagcgctggggatacgtccaagtccggccaaaggcgcacctgttctggtggtactacaggagcccgcagcgggtgtcgtcgccgggggggaagccatggccgaccatcctctggctgcaaggcggcccgggagcgtcgggcgtcgggctcggcaacttcctggaggtcggcccgctggacggcgacctgaagccgcgcggctcgacgtggctgcagaaggccgacctcatcttcgtggacaacccggtggggacaggatacagctacgtggaggacgacgcgctgctcgtcacgacggacggcgaggcggcggcggacctggcggcgctgctcagggcgctcgccgccaaggagatacccaccctgcagagcagcccgctgttcctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcggcctcaagctcacgctcgccggcgtggcgctcggcgacagctggatctcgccggaggatttcgcgctgtcgtacgggccgcttctgcggcaggtgtcgaggctggacagcaatggcgccgacagcgcgagcaagaaagcacaggtggtgaagcagcgcatcgcatcggggcagtggaagctggcgcagtacgcgctgagcagcatgctcacctcgatcgtcgccagcagcggccacgtggacgtgtacaacttcctgctcgacaccgggatggacccggtcgccgccggcgctgctccggcgaggagcttcccgccggcgtactcggcgtacctggacagcaagctgtccgtcggagactccattcgaagcgtcatgaatggagccatcaaggagaagctcaagatcatccctaaagacgttgtatgggaggagcagtcctacacggtctacaatgcgctgatcaatgacttcatgaagccgagaattcaggaggtcgatgagctcctgtcgtatggcgtcaatgtgacggtgtacaatggacagctcgatgtgatctgctcaacggttggtgcagaagcatgggttcagaagctcaaatgggatgggctgaagaacttcttgagattgccaaggcagcctctacattgtggctctagtgaagtcacaaagggctttgtcagatcctacaaaaacctgcatttctactggatccttggagctggccattttgtacctgttgatcagccctgcattgctcttgacatgattggtagcataacgcaatcttcagttcagtctcatccatag</cdnaseq>

Protein Sequence

<aaseq>MHRREFALFLLYLKMDTHALPLLCILCLITLLQLDGGAAISGGT NDGSERWGYVQVRPKAHLFWWYYRSPQRVSSPGGKPWPTILWLQGGPGASGVGLGNFL EVGPLDGDLKPRGSTWLQKADLIFVDNPVGTGYSYVEDDALLVTTDGEAAADLAALLR ALAAKEIPTLQSSPLFLVAESYGGKYAATLGVSLARAIRAGGLKLTLAGVALGDSWIS PEDFALSYGPLLRQVSRLDSNGADSASKKAQVVKQRIASGQWKLAQYALSSMLTSIVA SSGHVDVYNFLLDTGMDPVAAGAAPARSFPPAYSAYLDSKLSVGDSIRSVMNGAIKEK LKIIPKDVVWEEQSYTVYNALINDFMKPRIQEVDELLSYGVNVTVYNGQLDVICSTVG AEAWVQKLKWDGLKNFLRLPRQPLHCGSSEVTKGFVRSYKNLHFYWILGAGHFVPVDQ PCIALDMIGSITQSSVQSHP</aaseq>

Gene Sequence

<dnaseqindica>3507..3584#3262..3394#3116..3168#2154..2204#1961..2030#1443..1627#1249..1354#1052..1119#682..969#475..582#290..387#8..182#ccatttcatgcaccgccgcgagttcgcgctctttctgctgtatctgaagatggacacacacgctcttcctctgctctgcatcctctgcctcatcacccttcttcagctcgacggcggcgctgccatctccggcggcaccaacgacggctccgagcgctggggatacgtccaagtccggccaagtacgcaacgcaacacccgcgacgctctaccctaccctaccctatcctctgctgctgtgactcgactgactcttatcatcttcctcgacgcgccgccgccgtcgcagaggcgcacctgttctggtggtactacaggagcccgcagcgggtgtcgtcgccgggggggaagccatggccgaccatcctctggctgcaaggcggcccggtacacacttctcttcacctgaattctaatcatgtttgagctcaagaacgctaatcgatcatgtcgtcgtcgtcggaggaggagcagggagcgtcgggcgtcgggctcggcaacttcctggaggtcggcccgctggacggcgacctgaagccgcgcggctcgacgtggctgcagaaggccgacctcatcttcgtggtcaggaacacgaactcctcgtcgtcgccatgctttctctcgatctccaacctctctgctaaattatcatggctgaagctgaagctctacgctctgcaggacaacccggtggggacaggatacagctacgtggaggacgacgcgctgctcgtcacgacggacggcgaggcggcggcggacctggcggcgctgctcagggcgctcgccgccaaggagatacccaccctgcagagcagcccgctgttcctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcggcctcaagctcacgctcgccggcgtggcgctcggcgacagctggatctcgccggaggatttcgcggtcagtgtcactccctcgctctcgccactgatccattcatgatcgatctctcactcgtcgacaaccatggcgatcgatgcagctgtcgtacgggccgcttctgcggcaggtgtcgaggctggacagcaatggcgccgacagcgcgagcaagttagcttctgttctcgaccaaacatgcattctctcattctctgcgtcgccatggctgcatgacaagagcttcacttcacttgactgacttctcttaaacccatctccaattgttcatcgatcgatcaggaaagcacaggtggtgaagcagcgcatcgcatcggggcagtggaagctggcgcagtacgcgctgagcagcatgctcacctcgatcgtcgccagcagcggccacgtggtaatataatcttgaaattttcttcttcttctacctcgtaatctgtccatgaatttgttcgtcgtcgatggttgtggtctgcttctaggacgtgtacaacttcctgctcgacaccgggatggacccggtcgccgccggcgctgctccggcgaggagcttcccgccggcgtactcggcgtacctggacagcaagctgtccgtcggagactccattcgaagcgtcatgaatggagccatcaaggagaagctcaagatcatccctaaagacgttgtgtgagtgagcttcttcactgtttttaccacccctgattttgtttttgccggacagaaattaaaccacgtctgaaactttggtgatcactgatcagaactcagaaaccatgaggtaaaattcagtgatcattgattagaactcgaagctgtcatacatgatatgataggaatcagctcactgcctgaaaaactgcaaattcgtgaatatgtcctttctctgagatagtctaaattcttcacatcagaatgtgtctggtggatacgaacaagatgttcagaaaatatacctttcatcagtagttcatagcgttgcctgttcttgatgatgtgcagatgggaggagcagtcctacacggtctacaatgcgctgatcaatgacttcatgaagccgagaattcaggaggtgaaccgaactagaaccagatcgcaaatgatgcgtttctgggattaattcttccttcgtaaaactgaaacttcttctgagattgccagtatcatgataattatgcattgtcatctcctgcaggtcgatgagctcctgtcgtatggcgtcaatgtgacggtgtacaatggacaggttagctatacaaaacattattttccatgtgcaactattgttagtatactgcactcgaaactagttccataacattatcaatgaacttccattatgttacttagaatcatacaaggaagagttagccattaaaaaaagtgtaacaaaagagtataaaagggagtaacttctgaactcagagacgttagacttaggacttctatcctctttgagtccgtccaaaatatgctgatattatagtgaggctgttcctgaatcactttcaagtttgagcaaaggaaggaagctgcacatggtttgctgcttcggttcaactttctagtgtcgatgagctgcttctcctcgtccgtttcttgggcctcgtttggaatctagccatggcgtgacatcttcttcaggccatgacaatgcctggatacaggcgtctgctttctgataccataccatacttttatttttctttattttctcctctcttttttttgtgaaatgtaatccatgcgttagacttgcatgggagattggctcttctgctgcttcgtcatgccgtgaacaaccagaagataatgcttagtactagacaaataataataataataataataataataataataataataataataataataataataataataataataataataataataataattgtttggttaaacaaaggtagcaacaatgataagtatcagtagaacaatgtgtttagggatgatattgacaaaatgttttcagtggattaattggtcatgagtcctgacttgcaaaattataattattataggaaaatataaatttgattagaacaatgcattgttaccacttgtggctcggaatcaccccaagctgttatttcaagtactaaattcagtataattttcttctgtctgaagctcgatgtgatctgctcaacggttggtgcagaagcatgggttcagaagctcaagtaagagttttggtttccattgacccttttgccagtttttctccaagaaatatagaaatgtgtctaagctcctcacttgatcatttctttcagatgggatgggctgaagaacttcttgagattgccaaggcagcctctacattgtggctctagtgaagtcacaaagggctttgtcagatcctacaaaaacctgcatttctactggatccttggagctggccattttgtaagcattcttttgaaaaaaaaaagttattagaccttttatgttttgtgtgctaattgaaaactgcaccaatctggactgtaaaatatgagtgtacacattttttatgcaggtacctgttgatcagccctgcattgctcttgacatgattggtagcataacgcaatcttcagttcagtctcatccatagaagtgggtcaatacaaaggatggaaaggaaagaaactaaacctagtttgcttttcataagcatatacgaaggtctgttacgtagaagccaattgcattgacagtattagctgggcatttttctttgttattataacattctgagtttacatcataaatcaaagaatatgattatgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0392600, RefSeq:Os03g0392600