Difference between revisions of "Os03g0413100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0413100| Description = Similar to ACR4| Version = NM_001056894.1 GI:115453516 GeneID:4333106| Length = 3158 bp| Definition = Oryza sativa ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0413100|
 
GeneName = Os03g0413100|

Revision as of 19:37, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0413100

Description

Similar to ACR4

Version

NM_001056894.1 GI:115453516 GeneID:4333106

Length

3158 bp

Definition

Oryza sativa Japonica Group Os03g0413100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17728034..17731191

Sequence Coding Region

17728227..17728230,17728820..17728895,17729008..17729053,17729150..17729264,17729354..17729433
,17729510..17730103,17730196..17730300,17730706..17731044

Expression

GEO Profiles:Os03g0413100

Genome Context

<gbrowseImage1> name=NC_008396:17728034..17731191 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17728034..17731191 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggtgagacgagctgttcttcctgggacagcgacgatgagtaccagaagttcatccaaaagatgaaccctccaagggttgtgattgacaacacatcatgtaagaatgcaacagttgtgcatgtagacagtgccaacaagtatgggatactgttagaggtagtgcaggtcctcaccgagctgcaactcatagtgaaaaaagcctacatatcatcagatggtggatggttcatggatgtgttcaatgtgactgatcaaaatgggcagaagataatggatgaatcggtactggatgagatagtaaagtatattcataagtgtcttggggctgattcttgctttcttccttcgcggaggagatctgttggagtggaaccttcctctgactacactttgatagagctaactggaactgataggcccggtctgctctcagaagtgagcgctgtgctcacaaacctggaatgcaatgtggtgaatgcagaggtgtggactcataacaaacgagcagcagcggtcatgcaagtcatggataggaaaacggggctggcaatctcagacacacaacggcttgctagaataaaggagcgacttagctatgtgttcaaagggagcaacaggagtcaagacaccaagacaacggtgacaatggggataacccacacagagcggaggcttcaccagctgatgctggaggatcgggattatgaaaggtatgataaggataggacgaacgtcaaccccacaccggtggtttcggttgttaattggctcgacaaggattattccgtggtgaatattcggtgcaaggatcggccaaagcttctcttcgacacagtttgcaccctgacagatatgcaatatgtggttttccatgggagtgtggattctgagggccctgaagcttaccaggagtattacattaggcatattgatggctcacctgtcaactctgaggcggagcgacagcgagtcatccagtgtcttgaagctgctatagaaaggagagtatccgaggggctgaagctagagttgtcgacaggtgatagagtgggactgctatccgatgtcacacgcatcttccgtgagaatggcttgacggttacgagagctgaagtttctactaggggtgacaaggctgtcaacactttctatgtccgcgatgcagcagggagctccgccgtcgatctgaagactcttgaagctatacgccaagagataggccagacagtgcttcaagtaaaagggcaccctgatcaccgcaaatcacctccgcaagagtcgccatctaggtttctcttcagcagtctgttcagaccaagatcgctgtacagcctagggctgatcaggtcctga</cdnaseq>

Protein Sequence

<aaseq>MDGETSCSSWDSDDEYQKFIQKMNPPRVVIDNTSCKNATVVHVD SANKYGILLEVVQVLTELQLIVKKAYISSDGGWFMDVFNVTDQNGQKIMDESVLDEIV KYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTGTDRPGLLSEVSAVLTNLECNVV NAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKERLSYVFKGSNRSQDTKTTVTM GITHTERRLHQLMLEDRDYERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKL LFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEAAI ERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAG SSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFLFSSLFRPRSLYSLGLI RS</aaseq>

Gene Sequence

<dnaseqindica>194..197#787..862#975..1020#1117..1231#1321..1400#1477..2070#2163..2267#2673..3011#gtgctctcctcctcttcctcttcttctccttccttcctgccattcctgtgaccccgagccgaggcggcgagagagagagagagagagtattagtagtagtaggagagggaagcgagtctcctcttcctcctcctcctcatcgccgttagctgctgctttcgccgaaggattgttgctgggccgcgtcgtgaccatgggtatgtttcttgttctttcgttggctctaggatttggattttgagttcttgttccccccgctctggtagcccgccatggcggcggtaggtattcgaggtttcctccacttcctttgtcggggcttccgccctctcactccgtttctttggaaacatcgaaccggccgggttgccgtggtcggttcttgcaagaggaatacctcccttttttcaaataaagaaacgattttttctccctttatttaggactatgcgtggagtactcccgctatcggtgtttgggtgttttgatgtttgctgctgagatttcgtcccttttagtgtttcgtctgtggcggtgtttcggaatgtaaattcagtttttggtgctaccggagtagttaagactgggattctgtgttaataatatttttgggtctcggcacatttatgtatgcgcagcaaagcgaccgattttcctcgcatttgttgatgttgcgatttttttcattccaatcctgtatgctcaattgattccctgaagcgcactgtaccgagtttgattgggaatttttttaatgagttattgtccattctgttgtgttagcagatggtgagacgagctgttcttcctgggacagcgacgatgagtaccagaagttcatccaaaagatgaaccctccaaggtgacaaactgacaaccggttcctccgtaccctcatcaatctcagtactgcacaattaattatccattgccaaatcgtttgtagccgactgatgtgtgtttactgaatccagggttgtgattgacaacacatcatgtaagaatgcaacagttgtgcatgtaaggcactgaccaaatcgaggtctttttcttggtgcaaattgtttctgtttggttggtgaaaaagtgatttgtttttttgtttgaatcgtgtaggtagacagtgccaacaagtatgggatactgttagaggtagtgcaggtcctcaccgagctgcaactcatagtgaaaaaagcctacatatcatcagatggtggatggttcatggatggtacgatgcgattcttgagattttttttcttgaaatcgattagttcagaatggttaatttatcctgagctgttgatttttttatgtcagtgttcaatgtgactgatcaaaatgggcagaagataatggatgaatcggtactggatgagatagtaaagtatattcataaggtaattgatgccatcctaccttgattcttggttcattcaatgttcagcgtgctcaatctgctaactttccatgcagtgtcttggggctgattcttgctttcttccttcgcggaggagatctgttggagtggaaccttcctctgactacactttgatagagctaactggaactgataggcccggtctgctctcagaagtgagcgctgtgctcacaaacctggaatgcaatgtggtgaatgcagaggtgtggactcataacaaacgagcagcagcggtcatgcaagtcatggataggaaaacggggctggcaatctcagacacacaacggcttgctagaataaaggagcgacttagctatgtgttcaaagggagcaacaggagtcaagacaccaagacaacggtgacaatggggataacccacacagagcggaggcttcaccagctgatgctggaggatcgggattatgaaaggtatgataaggataggacgaacgtcaaccccacaccggtggtttcggttgttaattggctcgacaaggattattccgtggtgaatattcggtgcaaggatcggccaaagcttctcttcgacacagtttgcaccctgacagatatgcaatatgtggttttccatgggagtgtggattctgagggccctgaagcttaccaggtacctctctgctaacaacacagcctctaattctgccagaattatacttagacatgtaacgtatcgtttgttgtcttttcatggttcaataggagtattacattaggcatattgatggctcacctgtcaactctgaggcggagcgacagcgagtcatccagtgtcttgaagctgctatagaaaggagagtatccgaggtaactggacaaaaatacctgctcctttgtgattccatttattttgttctcattgtatatgttactttcttaagggcgttgatgttacctaaacatttagtctgcatagtatagtgcggaaagggacaacattggtgtcatgcagcctgtaggaggtaaattgtggttggagagctggcatcttgtattgtctgccacactttactgatgagtcgctgtcaatgttttgagtccttttccttcttggtgaagcacatgctgttttctccaatgcttgagagtgctattcatacaactaatccattcgtggaaaacacaatttgcttgctactattctgcactccattttttgtttatgtatttactctgacttaattttccaataatcgcatatattacctgcaggggctgaagctagagttgtcgacaggtgatagagtgggactgctatccgatgtcacacgcatcttccgtgagaatggcttgacggttacgagagctgaagtttctactaggggtgacaaggctgtcaacactttctatgtccgcgatgcagcagggagctccgccgtcgatctgaagactcttgaagctatacgccaagagataggccagacagtgcttcaagtaaaagggcaccctgatcaccgcaaatcacctccgcaagagtcgccatctaggtttctcttcagcagtctgttcagaccaagatcgctgtacagcctagggctgatcaggtcctgagttcttgggtgcctgctcaatccgcggatcgacaaatcatagcatgccatgtcaacaaatacatcgcggtgtatactctccgcagtctcagtcccaggacaaggctgatgatgcatttgactcaggtggcgtaccatcattcatcag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0413100, RefSeq:Os03g0413100