Difference between revisions of "Os10g0317000"
(Created page with "{{JaponicaGene|
GeneName = Os10g0317000|
Description = Retrotransposon gag protein family protein|
Version = NM_001070866.1 GI:115481475 GeneID:4348294|
Length = 4858 bp|
...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os10g0317000| | GeneName = Os10g0317000| | ||
Revision as of 21:06, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os10g0317000 |
|---|---|
| Description |
Retrotransposon gag protein family protein |
| Version |
NM_001070866.1 GI:115481475 GeneID:4348294 |
| Length |
4858 bp |
| Definition |
Oryza sativa Japonica Group Os10g0317000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:8609139..8613996 |
| Sequence Coding Region |
8609418..8613848 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:8609139..8613996 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:8609139..8613996 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggggacgatctcaagtccaccctggagaccctcgccaagaccctggcctccctgcaatcttcatccgaagccacgaccaaggcgatcgaggacaacacacaggccatcgcggccctgtccgttgctcggactaccgagaaggcttccacggaatcatcggggacacctgcaccagatcggccgccgaagcattggcgtccggagttccccaagtacgatggcaagaccgatccgctcgccttcatcaatcgatgcgagtcattcttcatccagcaacacgtcatcccggcggaacgcacgtggatggcttcgtacaatctgcaggacggcgcgcaactgtggtacatgcacgtccaggacaacgagggtacgccgacgtgggagcgtttcaaggaactcctcaacctccgctacgggcccccgctccgctccgtgccgctattcgagctctcggcgtgccgccgcacgagcaccgtggaagactaccaagatcggttccaggccctgcttccccgcgccggtcgtctcgaggaagcccagcaggtacagctgttcaccgggggcctcctcccgccgctcagcctccaggtccagcagcagaagccggcatccctggaagaggccatgagtctcgcccgacagttcgagctcatggagccctacctgttcccggccacgacatccgcgcgcggcgtactcccgacgccggccccccggccatcgaccggccccgtcgtcaagccggcaccggccaccgtcaccgtcgagggtcgcccggtcaagcggctctcccaagcccagcaggaggagcgccgtcgcctcgggctgtgctacaactgtgacgagaaatacagccgctcccacaacaaggtatgcaaacggttgttttttgtggagggtggtgcaatcgaagaaggcgacgacacggtggaggatgacaccgaagaggcgactgtcgaggcgcccgtgttctccttgcacgcggtggctggcatcccgttgggcaaaccgatcctgctccaagtgacgctcggtgccgcctccctcgttgccctggtggacacgggctccacccacaacttcatcggtgaggacgccgcgctccgcaccggcctgcccgtccagccgcgtccacggctcactgcgacggtggcgaacggggagaaggtttcctgtccgggtgtgctgcggcgggcaccgatcaccatccagggcatggcgttcgacgtcgacctttacgtcatgcccctcgccggctacgacatggtgctgggcactcagtggatggcccacctgggcaccaccatcgcctgggacgtgaccacggggaccgtgtccttccaacatcaagggcgcaccgtctcgtggcagagcctacccccgcaccagcgcgccgatgtccacgccgtcagcaccgggacgagcctcgttgcggccaccgggtcctcctccagcaccccggcgcccacgacggagcctgccctcctcgacggcctcctgggctccttcgacgacgtcttcgccgagccacggggcctgccaccaccacggggccgcgaccacgccatccacctcctgccaggcgccccgcccgtcgccgtgcgtccctaccgctacccggtggcgcacaaggatgaacttgagcggcagtgtgccgtcatgatggagcagggcctcattcgccggagcacgtcggcgttctcgtcccccgtcctgttggtcaagaaagccgacggctcgtggcgtttctgcgtcgactacagggccctcaacgccatcaccatcaaggacgcctacccgatcccggtggtggacgagctgctggacgagctgcacggcgccaagttcttcaccaagctcgatctgcgctcgggctatcatcaagtccggatgcgggctgaagacgtcgccaagacggcgttccggacgcacgatggcctctacgagttcttggtcatgccattcgggctgtgcaacgccccggcgacgttccaagcactaatgaacgacatcctccgcatatatcttcgccgttttgtccttgtgttttttgacgatattctcatctacagcaacacctgggcagaccatctgaggcacatccgggcggtgctcctcctgctgcgtcagcatcgcctgttcgtcaagcgttcaaagtgcgctttcggcgtcagctccatctcctacctgggccacatcatcggcgcgacgggcgtgtccatggacccggccaaggtgcaggctgtcgtggactggccgcaaccgcgctcggcccgcaccgtccggggcttcctggggctcgcgggctactaccgcaagttcgtccacgactacgggaccatcgccgcccccctcaccgcgctgaccaagaaggaggggttccggtggtccgacgaggtggcgactgcgttccacgccctcaagcacgccgtcaccacggccccggttctggcgctacccgacttcgtcaagccattcgtcgtcgagtgtgacgcctctacgcatgggttcggcgcggtactcctgcaggacaagcacccgctggcgttcttcagccgccccgtcgcgccgcgccaccgtgcgctcgctgcctacgagcgggagttgatcggcctcgtcctcgccatccgccactggcggccgtatctgtgggggcgtgcgttcgtggtgcggacggaccactacagcctcaagtacctgctcgatcaacgcctggcgaccatcccccaacaccattgggtgggcaagctcctcggcttcgacttcacggtggagtacaagtcgggcgcctccaacgtggtggccgatgccctctcgcgccgcgacacggacgagggtgccgtcttggcactgtcggcgccacggttcgactacatcgagcggttgcgggcagcccagaccacggagcctgctctcgtggccatccgcgacgccatccaggccggcacccgcagcgcgccgtgggcgcttcgcgacgggatggtgatgttcgactcccggctgtacattccgccatcgtcaccactgctccacgagatcttggcggcaatccacaccgacggacatgaaggcgtgcagcgtaccctgcacaggctgcgccgcgatttccactctcccgccatgcgccgggtggttcaggagttcgtccgggcgtgcgacacatgccagcgcaacaagtctgagcatttgcacccgggcggcctgcttcttcccctgccggttccaactacggtgtgggccgacattggcctcgacttcgtggaagctctgccccgtgtgggtgggaagacagtgatcctcaccgtcgtcgaccggttcagcaagtactgtcatttcatccctttggctcacccctacacagctgaatcagtagctcaggcgttctacgcggacattgtgcgcctccacggcataccccagtccatggtgtcggaccgggatccggtgttcacgtcatccttttggcgcgagttgatgcggctgaccggtacaaagatgcacatgacgacggccatccacccacaatctgatggccagacggaggccgccaacaaggtcatcgtcatgtacctgcggtgcttcaccggcgaccgacctcggcagtgggttcggtggctcccgtgggcggaatacatctacaataccgcctatcagacatctctccgcgacacgccgttccgggtggtatacgggcgcgacccgccgatcatcaggtcctacgagcccggcgagacgcgcgtggcggccgtcgctcgctccatggcggaccgtgacgagttcttggccgacgtgcgctaccggctagagcaggcccaggcgacgcacaagaagtactacgacaaaggccaccgtgcggtgtcctacgaggtgggcgacctcgttctcctgcgcctccgtcaccgcgccccggcatcgctgccccaagtgtccaagggcaagctcaagccccgctacttcgggccctaccgcgtcgtcgaggtgatcaaccccgtcgccgtccgcctcgagctcccgcctcgcgcaaagctccacgacgtgttccacgtgggcctactcaagaagttcgtgggagctgcgccaccatcgcctccggcactgcctgctgtccaccacggtgccattgatcccgagccagagcgcgtcacccgttctcggctagctcggggcgttcgtcaagttctggtccactggaagggggaatcggctgcgtccgccacatgggaagacctggacaccttcaaggagcgttacccggcgttccagctcgaggacgagctggctctcgaggaggggagagatgtcatgtggggccgaacctatgccaggcgccacagggcacgggacgtgcgccgagccggcgaacgcgccgcggcgcgcgcgcagagcacgtccagggagccacagggccaagtcaacaatagtggctag</cdnaseq> |
| Protein Sequence |
<aaseq>MGDDLKSTLETLAKTLASLQSSSEATTKAIEDNTQAIAALSVAR TTEKASTESSGTPAPDRPPKHWRPEFPKYDGKTDPLAFINRCESFFIQQHVIPAERTW MASYNLQDGAQLWYMHVQDNEGTPTWERFKELLNLRYGPPLRSVPLFELSACRRTSTV EDYQDRFQALLPRAGRLEEAQQVQLFTGGLLPPLSLQVQQQKPASLEEAMSLARQFEL MEPYLFPATTSARGVLPTPAPRPSTGPVVKPAPATVTVEGRPVKRLSQAQQEERRRLG LCYNCDEKYSRSHNKVCKRLFFVEGGAIEEGDDTVEDDTEEATVEAPVFSLHAVAGIP LGKPILLQVTLGAASLVALVDTGSTHNFIGEDAALRTGLPVQPRPRLTATVANGEKVS CPGVLRRAPITIQGMAFDVDLYVMPLAGYDMVLGTQWMAHLGTTIAWDVTTGTVSFQH QGRTVSWQSLPPHQRADVHAVSTGTSLVAATGSSSSTPAPTTEPALLDGLLGSFDDVF AEPRGLPPPRGRDHAIHLLPGAPPVAVRPYRYPVAHKDELERQCAVMMEQGLIRRSTS AFSSPVLLVKKADGSWRFCVDYRALNAITIKDAYPIPVVDELLDELHGAKFFTKLDLR SGYHQVRMRAEDVAKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNDILRIYLRRFVL VFFDDILIYSNTWADHLRHIRAVLLLLRQHRLFVKRSKCAFGVSSISYLGHIIGATGV SMDPAKVQAVVDWPQPRSARTVRGFLGLAGYYRKFVHDYGTIAAPLTALTKKEGFRWS DEVATAFHALKHAVTTAPVLALPDFVKPFVVECDASTHGFGAVLLQDKHPLAFFSRPV APRHRALAAYERELIGLVLAIRHWRPYLWGRAFVVRTDHYSLKYLLDQRLATIPQHHW VGKLLGFDFTVEYKSGASNVVADALSRRDTDEGAVLALSAPRFDYIERLRAAQTTEPA LVAIRDAIQAGTRSAPWALRDGMVMFDSRLYIPPSSPLLHEILAAIHTDGHEGVQRTL HRLRRDFHSPAMRRVVQEFVRACDTCQRNKSEHLHPGGLLLPLPVPTTVWADIGLDFV EALPRVGGKTVILTVVDRFSKYCHFIPLAHPYTAESVAQAFYADIVRLHGIPQSMVSD RDPVFTSSFWRELMRLTGTKMHMTTAIHPQSDGQTEAANKVIVMYLRCFTGDRPRQWV RWLPWAEYIYNTAYQTSLRDTPFRVVYGRDPPIIRSYEPGETRVAAVARSMADRDEFL ADVRYRLEQAQATHKKYYDKGHRAVSYEVGDLVLLRLRHRAPASLPQVSKGKLKPRYF GPYRVVEVINPVAVRLELPPRAKLHDVFHVGLLKKFVGAAPPSPPALPAVHHGAIDPE PERVTRSRLARGVRQVLVHWKGESAASATWEDLDTFKERYPAFQLEDELALEEGRDVM WGRTYARRHRARDVRRAGERAAARAQSTSREPQGQVNNSG</aaseq> |
| Gene Sequence |
<dnaseqindica>280..4710#aagcaatcagttccaaacaaacctctctctcccttgcattccctaagcctgcggcagaggggcaaaacctcaccggagaagacggatcgcgactacgaactgcgtagtcggggttgtgctatccttgggttcgacgcccttgacaacctggtatcacgttcctctcgatcctctactccacgcgacgctgccgcgccgtcaacgtctgttgacaccgccgccaccaccgccgccgccgtcccagacaccaactccaccgcatcctaccaagccgctgccatgggggacgatctcaagtccaccctggagaccctcgccaagaccctggcctccctgcaatcttcatccgaagccacgaccaaggcgatcgaggacaacacacaggccatcgcggccctgtccgttgctcggactaccgagaaggcttccacggaatcatcggggacacctgcaccagatcggccgccgaagcattggcgtccggagttccccaagtacgatggcaagaccgatccgctcgccttcatcaatcgatgcgagtcattcttcatccagcaacacgtcatcccggcggaacgcacgtggatggcttcgtacaatctgcaggacggcgcgcaactgtggtacatgcacgtccaggacaacgagggtacgccgacgtgggagcgtttcaaggaactcctcaacctccgctacgggcccccgctccgctccgtgccgctattcgagctctcggcgtgccgccgcacgagcaccgtggaagactaccaagatcggttccaggccctgcttccccgcgccggtcgtctcgaggaagcccagcaggtacagctgttcaccgggggcctcctcccgccgctcagcctccaggtccagcagcagaagccggcatccctggaagaggccatgagtctcgcccgacagttcgagctcatggagccctacctgttcccggccacgacatccgcgcgcggcgtactcccgacgccggccccccggccatcgaccggccccgtcgtcaagccggcaccggccaccgtcaccgtcgagggtcgcccggtcaagcggctctcccaagcccagcaggaggagcgccgtcgcctcgggctgtgctacaactgtgacgagaaatacagccgctcccacaacaaggtatgcaaacggttgttttttgtggagggtggtgcaatcgaagaaggcgacgacacggtggaggatgacaccgaagaggcgactgtcgaggcgcccgtgttctccttgcacgcggtggctggcatcccgttgggcaaaccgatcctgctccaagtgacgctcggtgccgcctccctcgttgccctggtggacacgggctccacccacaacttcatcggtgaggacgccgcgctccgcaccggcctgcccgtccagccgcgtccacggctcactgcgacggtggcgaacggggagaaggtttcctgtccgggtgtgctgcggcgggcaccgatcaccatccagggcatggcgttcgacgtcgacctttacgtcatgcccctcgccggctacgacatggtgctgggcactcagtggatggcccacctgggcaccaccatcgcctgggacgtgaccacggggaccgtgtccttccaacatcaagggcgcaccgtctcgtggcagagcctacccccgcaccagcgcgccgatgtccacgccgtcagcaccgggacgagcctcgttgcggccaccgggtcctcctccagcaccccggcgcccacgacggagcctgccctcctcgacggcctcctgggctccttcgacgacgtcttcgccgagccacggggcctgccaccaccacggggccgcgaccacgccatccacctcctgccaggcgccccgcccgtcgccgtgcgtccctaccgctacccggtggcgcacaaggatgaacttgagcggcagtgtgccgtcatgatggagcagggcctcattcgccggagcacgtcggcgttctcgtcccccgtcctgttggtcaagaaagccgacggctcgtggcgtttctgcgtcgactacagggccctcaacgccatcaccatcaaggacgcctacccgatcccggtggtggacgagctgctggacgagctgcacggcgccaagttcttcaccaagctcgatctgcgctcgggctatcatcaagtccggatgcgggctgaagacgtcgccaagacggcgttccggacgcacgatggcctctacgagttcttggtcatgccattcgggctgtgcaacgccccggcgacgttccaagcactaatgaacgacatcctccgcatatatcttcgccgttttgtccttgtgttttttgacgatattctcatctacagcaacacctgggcagaccatctgaggcacatccgggcggtgctcctcctgctgcgtcagcatcgcctgttcgtcaagcgttcaaagtgcgctttcggcgtcagctccatctcctacctgggccacatcatcggcgcgacgggcgtgtccatggacccggccaaggtgcaggctgtcgtggactggccgcaaccgcgctcggcccgcaccgtccggggcttcctggggctcgcgggctactaccgcaagttcgtccacgactacgggaccatcgccgcccccctcaccgcgctgaccaagaaggaggggttccggtggtccgacgaggtggcgactgcgttccacgccctcaagcacgccgtcaccacggccccggttctggcgctacccgacttcgtcaagccattcgtcgtcgagtgtgacgcctctacgcatgggttcggcgcggtactcctgcaggacaagcacccgctggcgttcttcagccgccccgtcgcgccgcgccaccgtgcgctcgctgcctacgagcgggagttgatcggcctcgtcctcgccatccgccactggcggccgtatctgtgggggcgtgcgttcgtggtgcggacggaccactacagcctcaagtacctgctcgatcaacgcctggcgaccatcccccaacaccattgggtgggcaagctcctcggcttcgacttcacggtggagtacaagtcgggcgcctccaacgtggtggccgatgccctctcgcgccgcgacacggacgagggtgccgtcttggcactgtcggcgccacggttcgactacatcgagcggttgcgggcagcccagaccacggagcctgctctcgtggccatccgcgacgccatccaggccggcacccgcagcgcgccgtgggcgcttcgcgacgggatggtgatgttcgactcccggctgtacattccgccatcgtcaccactgctccacgagatcttggcggcaatccacaccgacggacatgaaggcgtgcagcgtaccctgcacaggctgcgccgcgatttccactctcccgccatgcgccgggtggttcaggagttcgtccgggcgtgcgacacatgccagcgcaacaagtctgagcatttgcacccgggcggcctgcttcttcccctgccggttccaactacggtgtgggccgacattggcctcgacttcgtggaagctctgccccgtgtgggtgggaagacagtgatcctcaccgtcgtcgaccggttcagcaagtactgtcatttcatccctttggctcacccctacacagctgaatcagtagctcaggcgttctacgcggacattgtgcgcctccacggcataccccagtccatggtgtcggaccgggatccggtgttcacgtcatccttttggcgcgagttgatgcggctgaccggtacaaagatgcacatgacgacggccatccacccacaatctgatggccagacggaggccgccaacaaggtcatcgtcatgtacctgcggtgcttcaccggcgaccgacctcggcagtgggttcggtggctcccgtgggcggaatacatctacaataccgcctatcagacatctctccgcgacacgccgttccgggtggtatacgggcgcgacccgccgatcatcaggtcctacgagcccggcgagacgcgcgtggcggccgtcgctcgctccatggcggaccgtgacgagttcttggccgacgtgcgctaccggctagagcaggcccaggcgacgcacaagaagtactacgacaaaggccaccgtgcggtgtcctacgaggtgggcgacctcgttctcctgcgcctccgtcaccgcgccccggcatcgctgccccaagtgtccaagggcaagctcaagccccgctacttcgggccctaccgcgtcgtcgaggtgatcaaccccgtcgccgtccgcctcgagctcccgcctcgcgcaaagctccacgacgtgttccacgtgggcctactcaagaagttcgtgggagctgcgccaccatcgcctccggcactgcctgctgtccaccacggtgccattgatcccgagccagagcgcgtcacccgttctcggctagctcggggcgttcgtcaagttctggtccactggaagggggaatcggctgcgtccgccacatgggaagacctggacaccttcaaggagcgttacccggcgttccagctcgaggacgagctggctctcgaggaggggagagatgtcatgtggggccgaacctatgccaggcgccacagggcacgggacgtgcgccgagccggcgaacgcgccgcggcgcgcgcgcagagcacgtccagggagccacagggccaagtcaacaatagtggctagaattaggcatgataagattagtttctattttaagttagttgctctttctgttcctaagattgaggagatttgttactcccgtagtcaggggccgccggccatatatgctgtaatcagagattgagaataatcaagcaatcagttccaa</dnaseqindica> |
| External Link(s) |
