Difference between revisions of "Os03g0588600"

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(Created page with "{{JaponicaGene| GeneName = Os03g0588600| Description = Frigida-like family protein| Version = NM_001057113.1 GI:115453954 GeneID:4333351| Length = 3091 bp| Definition = O...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0588600|
 
GeneName = Os03g0588600|

Revision as of 19:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0588600

Description

Frigida-like family protein

Version

NM_001057113.1 GI:115453954 GeneID:4333351

Length

3091 bp

Definition

Oryza sativa Japonica Group Os03g0588600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22508748..22511838

Sequence Coding Region

22508836..22510126,22510526..22510698,22511176..22511724

Expression

GEO Profiles:Os03g0588600

Genome Context

<gbrowseImage1> name=NC_008396:22508748..22511838 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22508748..22511838 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgtccgattccccgaaaccccaaccaaccccctcgccgccggcgccacccccacttccggtcccggcggcggcggggacgacgatgggggagctggaggcggccatcgaggcgctcgccgccaagaagctgcgcctccgcgaggccttcgattgcctcgtcgcctgctcccccatccccatccccttccgctgggacgacatcgacgcccacgtctcgtccatccagtcctccgtcgccggccgcttccgccagttccaggcgctccagaccgccgccaccgctggaataacggcggccccggccaccagcaacgccagcagccgcgtcgagcgttcggtcgaacaccttgtggtggtggtggagggccaagagtcccacgtcgcgcgccatgaggacggtggaaacggtgagggtgagggtgagggtgagggtgggctaggcaaggaggtggctatggacgtagaatccgaggaggagaacggcatggtggtggaggtggcaagcgaggcgcctcgcggagaagacggtgaggtggaggaggacgagaagatgggggggccaatcaatgcgtctcctcctagcgaagaaatccatgggaagggcgcggacatgtcgagaagatgggggaatcccatggaaatgtcggccgacgtggacgatgcgaagaccaagacgacggcgacggcggcggcggcggaactgacggcgatggcgatctctccgattccgggattcacaggcagagggggcgcggaggcgtcgctgaggcggtctctcgcggcggcgtgcgcgagcatggactcgtcgagcctggcgcgcatcctgtgctcgtccggcagcagcagcagcagccacgccaccctcgccgcacgtcacttccgcccggcgcttctcgccgccgccgaacccgcggcgctcgtcgtccgcgccgtcagggacctgctggccgggacggcgcccatcagggacagcgcgtgggagagctgcgtggagctgctcagctgcgtgcccaagctcgccgtggcgccgtcgccgggcacgatggagcaggccaatcgcttggccgaggactggaaggagatgatcgggaggaccgaaagttgcagcatgaacctcggccggttggctgtatggggccttctcaactttcttgtctcctacaacattgtcctggagttcgacgcggaagaaatcatccatttctttggcactctcccggacgacaagaagcagtgttgcatctccctctgcaagtatcttggactgattgacaagatggctgattcagttggtcatttgattgaacatggacaacaacttgtcgctatcagattggcatgcactttgaatttgacagacaaatacactccactttccatcatggaagactatattcagaatgctaaggagactgctcaagagatactgagcatggaaagtgattcagagtcactgaaactgtccatgtcaaagcaggtcaatgctctaatattgtcatggagggttgttggtgaatgcaatattgactctgtccattgtgatagaattaaggcagaaattacccagctgttgcataaatatgcaaacaagaggcacagcctagaagaacttccttctgatacttctagtccacatcagaaacatcaccaaatgtcgcaagagaagcaccactggcagcaaaagcatcgagaggaacaacagcagcagtttcaaaatcaatccaaggaacaagaacaagagagaaggatgcaaaagttacgagagctgaggaaaaagaaaaacaagagaactcagcgcaggaagcggaagcaaaatgcacaagtgatgaagcagcatcaatttgagaaacagcgaaaactatatcacgctggttcatttaccaattctcaaagctatgtcagatcagaaattcaccaccacctcagccagcatttttcaggaactataggaacacctgttgcaccatatacacctgttgcaccatataccggacctttttggtag</cdnaseq>

Protein Sequence

<aaseq>MVVSDSPKPQPTPSPPAPPPLPVPAAAGTTMGELEAAIEALAAK KLRLREAFDCLVACSPIPIPFRWDDIDAHVSSIQSSVAGRFRQFQALQTAATAGITAA PATSNASSRVERSVEHLVVVVEGQESHVARHEDGGNGEGEGEGEGGLGKEVAMDVESE EENGMVVEVASEAPRGEDGEVEEDEKMGGPINASPPSEEIHGKGADMSRRWGNPMEMS ADVDDAKTKTTATAAAAELTAMAISPIPGFTGRGGAEASLRRSLAAACASMDSSSLAR ILCSSGSSSSSHATLAARHFRPALLAAAEPAALVVRAVRDLLAGTAPIRDSAWESCVE LLSCVPKLAVAPSPGTMEQANRLAEDWKEMIGRTESCSMNLGRLAVWGLLNFLVSYNI VLEFDAEEIIHFFGTLPDDKKQCCISLCKYLGLIDKMADSVGHLIEHGQQLVAIRLAC TLNLTDKYTPLSIMEDYIQNAKETAQEILSMESDSESLKLSMSKQVNALILSWRVVGE CNIDSVHCDRIKAEITQLLHKYANKRHSLEELPSDTSSPHQKHHQMSQEKHHWQQKHR EEQQQQFQNQSKEQEQERRMQKLRELRKKKNKRTQRRKRKQNAQVMKQHQFEKQRKLY HAGSFTNSQSYVRSEIHHHLSQHFSGTIGTPVAPYTPVAPYTGPFW</aaseq>

Gene Sequence

<dnaseqindica>89..1379#1779..1951#2429..2977#gaaccaacccggctattccattcccctctcatttggaccccaaggcccatcccaggtcgcacgctgatctccgcacccgccacccgcaatggtggtgtccgattccccgaaaccccaaccaaccccctcgccgccggcgccacccccacttccggtcccggcggcggcggggacgacgatgggggagctggaggcggccatcgaggcgctcgccgccaagaagctgcgcctccgcgaggccttcgattgcctcgtcgcctgctcccccatccccatccccttccgctgggacgacatcgacgcccacgtctcgtccatccagtcctccgtcgccggccgcttccgccagttccaggcgctccagaccgccgccaccgctggaataacggcggccccggccaccagcaacgccagcagccgcgtcgagcgttcggtcgaacaccttgtggtggtggtggagggccaagagtcccacgtcgcgcgccatgaggacggtggaaacggtgagggtgagggtgagggtgagggtgggctaggcaaggaggtggctatggacgtagaatccgaggaggagaacggcatggtggtggaggtggcaagcgaggcgcctcgcggagaagacggtgaggtggaggaggacgagaagatgggggggccaatcaatgcgtctcctcctagcgaagaaatccatgggaagggcgcggacatgtcgagaagatgggggaatcccatggaaatgtcggccgacgtggacgatgcgaagaccaagacgacggcgacggcggcggcggcggaactgacggcgatggcgatctctccgattccgggattcacaggcagagggggcgcggaggcgtcgctgaggcggtctctcgcggcggcgtgcgcgagcatggactcgtcgagcctggcgcgcatcctgtgctcgtccggcagcagcagcagcagccacgccaccctcgccgcacgtcacttccgcccggcgcttctcgccgccgccgaacccgcggcgctcgtcgtccgcgccgtcagggacctgctggccgggacggcgcccatcagggacagcgcgtgggagagctgcgtggagctgctcagctgcgtgcccaagctcgccgtggcgccgtcgccgggcacgatggagcaggccaatcgcttggccgaggactggaaggagatgatcgggaggaccgaaagttgcagcatgaacctcggccggttggctgtatggggccttctcaactttcttgtctcctacaacattgtcctggagttcgacgcggaagaaatcatccatttctttggcactctcccggacgacaagaagcagtgttgcatctccctctgcaagtatcttggactgattgacaagatggctggtacagtttcaatgcctcttactcatactcattgctcaactataatttcatatgtttgtaggcaacttatgctacacatctagcgcaattgtcgcggatatggaaattcattgatttgtgcttgtgttcacattctttaatgataagcttgtttaactccatgtcccaagccttcttatgttatatttagtggccataaatttgtttatcatctaactgaatcagtagaaattatgttttacacttttagtcacagttaatacagagcattaatttgcatcctaaaatggtgacctcaacattatatttgcatttgctagtaaaaaagtaatctcatgaacattttctatatccaaaaagggttccatgtggacttatgattatctctcattatttcagattcagttggtcatttgattgaacatggacaacaacttgtcgctatcagattggcatgcactttgaatttgacagacaaatacactccactttccatcatggaagactatattcagaatgctaaggagactgctcaagagatactgagcatggaaagtgattcagagtcactggtatgtccctttttatgcagtagctatctcatttatattttctactcgtttttctaaccaaaatttcaaatccgtgtgaatatgaatggaagaatagttcattcatgtgctctagagcatgtagctcttcacgttgcagagttagaaaaaaaaaactatattcctttttctaatgtaaccctcttatgatttaaaggtaaacaactggtgtttccggctttgtaaaaactgtactgcacaacattctgaagcacgtaattaggatgttttcaatgtaatgatttatttaggatgtagtggagtagtgagtaatttcaaattatatattcatattgcttttagaaaatatcatattcaatttgtgaaaaatcactgcagatcatttggcatggtaaatgattgcttccacatactgatatacaaatatgcttattttaaaattggtttaacacacctgatgcatcttgtattgagcagaaactgtccatgtcaaagcaggtcaatgctctaatattgtcatggagggttgttggtgaatgcaatattgactctgtccattgtgatagaattaaggcagaaattacccagctgttgcataaatatgcaaacaagaggcacagcctagaagaacttccttctgatacttctagtccacatcagaaacatcaccaaatgtcgcaagagaagcaccactggcagcaaaagcatcgagaggaacaacagcagcagtttcaaaatcaatccaaggaacaagaacaagagagaaggatgcaaaagttacgagagctgaggaaaaagaaaaacaagagaactcagcgcaggaagcggaagcaaaatgcacaagtgatgaagcagcatcaatttgagaaacagcgaaaactatatcacgctggttcatttaccaattctcaaagctatgtcagatcagaaattcaccaccacctcagccagcatttttcaggaactataggaacacctgttgcaccatatacacctgttgcaccatataccggacctttttggtagctagggtccatatataatggaccgggttcatcctgcctacattcaactattcaagtcagagtagtagtacttgataccattactgtttgactgaactgaagataaagatagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0588600, RefSeq:Os03g0588600