Difference between revisions of "Os03g0596900"

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(Created page with "{{JaponicaGene| GeneName = Os03g0596900| Description = GTP-binding signal recognition particle SRP54, G-domain containing protein| Version = NM_001057139.1 GI:115454006 Gen...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0596900|
 
GeneName = Os03g0596900|

Revision as of 19:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0596900

Description

GTP-binding signal recognition particle SRP54, G-domain containing protein

Version

NM_001057139.1 GI:115454006 GeneID:4333378

Length

7920 bp

Definition

Oryza sativa Japonica Group Os03g0596900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22979429..22987348

Sequence Coding Region

22979777..22979949,22980063..22980093,22981322..22981431,22981977..22982364,22982606..22982658
,22982803..22982881,22983001..22983111,22983218..22983277,22983880..22983956
,22985417..22985450,22985529..22986524

Expression

GEO Profiles:Os03g0596900

Genome Context

<gbrowseImage1> name=NC_008396:22979429..22987348 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22979429..22987348 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgaggaagacccagcatcggcaatggaggagaccgctgtagcgaatggaggagcagctgatgatgttgctgctcctgataaggacaatgacattaaagaaaaagctggcaagggcaacgaggtagcagtagagaataagaatgctgaagagcagaataaaggaggctcagagaatggtaccaagggtccatctgatggagatgttgagatggcggaggctgagactgcaaaggagagtgatgtgaagcagttggacactgaggatgcgaaaaaggatggtgcgcaggatgcagatgcaaatgaagaaaagaataccaaggacacagaaggtgaagatgtcaagatggctgaggctgaggccgaggcaggaaatgccgatgtcaaggatacagcagagaaggaagataaagatgagaacaccaatacggagaagcaggaattgaaagatgcaaaagaaagtggttctgagaagcaggaggaattgaaggagcaagataaaagtggttctgaaaagcaggaggaattgaaggagcaagataaaagtggtttagctgagtacgaggaaaagaaagcagaagaagagagtggtgctgagaagcaaggggaagaggaagcagaggaaaagggctctgctgataatgacaacgaggaaggagacaaaaatgcaaatatcagtgatgaacatctgaaaaaagatggtggaaaggatggaaacaaagatgaagcagaagaagaggaggtcagtgaagcagacaagaaggtagaagagaataaggaggaaacaccgaagaacaagaaggcaagaagtgcaagggatagaagccaaggtaaggataagaaacaggatgggtccaaatccagggaagcgaagagcttactgaacaccgccagcccttatggtactgatcgccctcagcgtgagaggaaaacagtggagaggttggttgaagtgattgaaaaggagcccaacaggaacttcgtagttgagaagggtcgtggtactccgttgaaggatataccaagtgtggcgcacagaatatcaaggaaaaaacctgctgatcttaagtttcttcacaatgttctttttggcaggaaaggcaagactgttgattttaaaggtcatatactccagttctctggtttcgtgtggcatgaaagtgatgaaaagcagagggcgaaggctaaggagaagcttgacaaatgtgtgaaagacatgttgttggaactctgttggatccttgctattccgactccaaaagcaaacatcagaaaggaagatattgtggcaaagctgttggatttcattgctgaacctcatgctatggctgattccgggcattcggatgatcaggggtcgaattctcggaaacgcaagagaggaagcacacccaagagttctagcaagaaatttgatgatgatgacgacataactccaagtaaaaagcggaataaagctctggaatatgatactgatgaagatgaggatgatgcggatcccatgaagtcagatagtgaggaagatgactatgattctgagaaagagaaggcaaagaagaactcctcagatgcaaaagataccgctagtaaaaagaaggctgcaacagggagcagccacaagacaggtactccaaggacagtgagcaagagttcaagcaaaacaccatcttcaaaagtttccaaggaaaaggagagccctgaggacagtgcaaaagtcttctctaggaagaagaaatctgtcacaccaaagcgtccttcaagctctgaaaaggagataaaagacaagaagtcatcaggtaaaaaggtgacaaagggtaaaggagaatcagcagaagtaggtctacccagtaaggacgagctgaggaaaaccataactgaaatccttaaaaaagttgatttcaacacggctactttcagtgacattcttaaaaagcttgaggatcgctacaagattgacctgacaccacgaaagtcagctatcaaaatcatgatccaagaggagctaaccaggctgtcgaaagaagacgacgatgaggatgaggacgaggatggaaatgaagacgctgagaagaaaaaaccacaacatcaagccaaggaggtggtggcctga</cdnaseq>

Protein Sequence

<aaseq>MPEEDPASAMEETAVANGGAADDVAAPDKDNDIKEKAGKGNEVA VENKNAEEQNKGGSENGTKGPSDGDVEMAEAETAKESDVKQLDTEDAKKDGAQDADAN EEKNTKDTEGEDVKMAEAEAEAGNADVKDTAEKEDKDENTNTEKQELKDAKESGSEKQ EELKEQDKSGSEKQEELKEQDKSGLAEYEEKKAEEESGAEKQGEEEAEEKGSADNDNE EGDKNANISDEHLKKDGGKDGNKDEAEEEEVSEADKKVEENKEETPKNKKARSARDRS QGKDKKQDGSKSREAKSLLNTASPYGTDRPQRERKTVERLVEVIEKEPNRNFVVEKGR GTPLKDIPSVAHRISRKKPADLKFLHNVLFGRKGKTVDFKGHILQFSGFVWHESDEKQ RAKAKEKLDKCVKDMLLELCWILAIPTPKANIRKEDIVAKLLDFIAEPHAMADSGHSD DQGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEE DDYDSEKEKAKKNSSDAKDTASKKKAATGSSHKTGTPRTVSKSSSKTPSSKVSKEKES PEDSAKVFSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGKGESAEVGLPSKDELRKT ITEILKKVDFNTATFSDILKKLEDRYKIDLTPRKSAIKIMIQEELTRLSKEDDDEDED EDGNEDAEKKKPQHQAKEVVA</aaseq>

Gene Sequence

<dnaseqindica>7400..7572#7256..7286#5918..6027#4985..5372#4691..4743#4468..4546#4238..4348#4072..4131#3393..3469#1899..1932#825..1820#ctctctctctctctttctctctcgcagtcaccgcaggtggagagggtggaggagacgggtagggggggaggaagccgaggaggcgacgcgactagctgctgctgctgctgctcctgctccactccgccctaggtcaggtgaggaagccagccagccaccacccgagtctcatctcgcgctccggggcggctcgggattcgcttcgctcctgcgcggaagctgcgtccggggcttgctagggtttggccgctgcgagggttttgggtgttgcgctttgctttgctcctgggttccgggtggagctccaaggggggggggtgcttcttgagttgcaggaggcgtcaaggctgccgtcttttggtaccctagctgctcaattgcgctcccgctgggttcgatttgggggtacctggcctcgcgctggcctccgctcaaggttatgcttgttccgggggatggggttggaattttgtggttatgaccgcaagcgcaggttttagggttctgtgtgagtgtgtcagtatagtggtgtatgaaagctcgtggagcggaaatggcctaggggccataatttggtctcctcttctgctgtccttgtttgccatggctatcttttactagcatctctctagttacctcgagaccactttggtacttgttcatttactacttgttctggatgatggtagtacacattttaagtatgacatgctgtgtgtgtgcccttgttctgccatttatgttatttcggttcccaaaattaagtatgcgtctttacttcggtaactggttgtctgcaggtagtgcaataagggtttctcgggatgcctgaggaagacccagcatcggcaatggaggagaccgctgtagcgaatggaggagcagctgatgatgttgctgctcctgataaggacaatgacattaaagaaaaagctggcaagggcaacgaggtagcagtagagaataagaatgctgaagagcagaataaaggaggctcagagaatggtaccaagggtccatctgatggagatgttgagatggcggaggctgagactgcaaaggagagtgatgtgaagcagttggacactgaggatgcgaaaaaggatggtgcgcaggatgcagatgcaaatgaagaaaagaataccaaggacacagaaggtgaagatgtcaagatggctgaggctgaggccgaggcaggaaatgccgatgtcaaggatacagcagagaaggaagataaagatgagaacaccaatacggagaagcaggaattgaaagatgcaaaagaaagtggttctgagaagcaggaggaattgaaggagcaagataaaagtggttctgaaaagcaggaggaattgaaggagcaagataaaagtggtttagctgagtacgaggaaaagaaagcagaagaagagagtggtgctgagaagcaaggggaagaggaagcagaggaaaagggctctgctgataatgacaacgaggaaggagacaaaaatgcaaatatcagtgatgaacatctgaaaaaagatggtggaaaggatggaaacaaagatgaagcagaagaagaggaggtcagtgaagcagacaagaaggtagaagagaataaggaggaaacaccgaagaacaagaaggcaagaagtgcaagggatagaagccaaggtaaggataagaaacaggatgggtccaaatccagggaagcgaagagcttactgaacaccgccagcccttatggtactgatcgccctcagcgtgagaggaaaacagtggagaggttggttgaagtgattgaaaaggagcccaacaggaacttcgtagttgagaaggtctgttgtttgcattcattttgtaacactattttagtttgacaggtcaataaacattgtcaaatgttttcattgcagggtcgtggtactccgttgaaggatataccaagtggtataaccctctcttatcgtttggtttaccattttaaatttcctttttcgtttgttcttcatcatctggattggtaatttgttatgaagaatgattgagaatctttaagacctgttttaggaacctcctgttcccgctaaaatgctgccccttacacacgctggacttatgtggtctctcgaaacttgcttaagtctaactggacaaatgaaatttcttgatcaactttgtctcaatctataagttgaactaataagtgcttatttcctgcatgatgaaatagccatgtttttatattggtggaatttgattgattgatttattttatcgatacaatacatgctatgtatcagatattgagagctgaactgaacacttgctcagatttcccagtttcggtagttgctagttcaaagaactatttatctacattttaagtaactcagtggatgtttttctttctaggaataagttttgtgaacaaagtcagcattgacatctatgttaaaactttagattaggatggtaaaaatattgcagcttttttgtactgaatgtgatccaaaaaggagttgttcctaaggcaataaaatcgcaagaatgcacaaagccattaatgaagctcaattataagggaactaaattggattccagtgttctaaaaaaggttgacaagtctgcatacaaagaatggttgcctcaatcttgtactgcttaggccacataagcaattggttatgccttataagtgctacaaggtgggtgactacgaataccacatacctttttctttttttaatcttgttagatgcacaactcaccggtaagaggaggccaaaagactctggtgatcctttcagtttcaaaactctaatctgatctctttggcagaattttgatgaacccaaacattttgatcattgatggggcagatttgatttatattttgatgaattactgcgttaattaattatattccatttgcattgcatctaacaaagacaacatgtctggtgcgacttaaatcttttgagtatatgaaagtgatatttgacaggcaatgttgttttcttgtttcccttcttgttggtgccctcatcttcattttatgagtgcaaatttatcttcatctttgtggatgagtgttaatgcccttcgtaaactttttcggcagccatcagtcactacgaatgagttctgtaatggtgttgctttctttgctcgctgaggtcaaattgcattatcatctaactgctcaagaatggtctgctttgatcacaatctggttgacaaaactgactgcatttaatattcatagcttgttgatataaacaaagatttgtgcttatatctatttttatggtttggattcatcctgcagtctattaaacatctttctttttctgtggcattttgaatgcttttttttggactgatttttttttgcaacttgcttgcagtggcgcacagaatatcaaggaaaaaacctgctgatcttaagtttcttcacaatgttctttttggcaggaaaggcaaggtaaaatatggcatatgagaatgtttcttttgacatagctgatgcaggatgtctatactagcttttagcacctaaacagtgtccattccagttgaattaaaagtgttcaagcaaacttatgtactcaacttcattagaagtatgtgattcccttaataggttttaatataacttaaccagcactgaagaatgaatttaaaatggcatggtgtatatgcaatactggtacaccactatgttttgactccagtgcatatgctgttttgtatcaaaagaagtgaaccagaagccctaaaataacacaaccctaactttttagcatgctgtttcaactttcaagttacaaatggtagtaaaagaaaaaaaaaagaagaggaatttctcagtgtgtaaagccttgcagccaatattgggttatcaaaataccatagaagctgcgtaggcaggatactattcaactataaattcattttccgtttgtgatggacatcttaagtttttgaccttttaggtgaccataagattgccagttattggtttggattgcttaagcaaaactgttgtgtatgatactgacaaatactgtttgtgtaatgtaccagactgttgattttaaaggtcatatactccagttctctggtttcgtgtggcatgaaagtgatgtaagcttcttcaatacatccaaatttttaatgaatttaactcaattatatttagctgacagtaattgtttaatacttaaagagccctattattatctatttgtaggaaaagcagagggcgaaggctaaggagaagcttgacaaatgtgtgaaagacatgttgttggaactctgttggatccttgctattccgactccaaaagcaaacatcagaaaggtatataatgtcttgttcccccttcccaaatgtgttttttttgttagaacagagatggaattcaagaccttattgaatagtgatttgctagtcgctaatatagttcataactcatgtaggaagatattgtggcaaagctgttggatttcattgctgaacctcatgctatggctgattccgggcattcggatgatcaggcaagatcaagatgtgataacttgttttgttaatattcctgtctgggtgtttatattcaccgccacttacagttgctattagttcttgaatgattgggaatttaccatatttttctctgtgctctactttcttctgctttctaggggtcgaattctcggaaacgcaagagaggaagcacacccaagagttctagcaaggtatggtgccaagtttgtcagatccaacctgttgacagtattttttaattggaattttttaatgtgacttattaatatatgcaatctttatcagcatgtgtctttttgctgattatataactgaactactgaagttttgctagtctcttccaagatgtacatgtgatgatctattgtgttgacacattaatgattgtggttatttattcttgtaaccttgtttgcattgtcggtgtttcagaaatttgatgatgatgacgacataactccaagtaaaaagcggaataaagctctggaatatgatactgatgaagatgaggatgatgcggatcccatgaagtcagatagtgaggaagatgactatgattctgagaaagagaaggcaaagaagaactcctcagatgcaaaagataccgctagtaaaaagaaggctgcaacagggagcagccacaagacaggtactccaaggacagtgagcaagagttcaagcaaaacaccatcttcaaaagtttccaaggaaaaggagagccctgaggacagtgcaaaagtcttctctaggaagaagaaatctgtcacaccaaagcgtccttcaagctctgaaaaggagataaaagacaagaagtcatcaggtaatttttgtccttaaactgtagtagcatcatactatattagtttacatgcagcactgtataatactcgaaatcttcccatttctttgatgtttggtaattgttatcaacatatttctatttcccccatggagattagactattttcctagttgtaacatgctagtagaattccattttctctgttgttttgtttggttctcaggtgtctcaaatctagctgaatgaaacttgcgctgcagcttatatttggggttcatatttataatttgcagtttattttgcttttctgcttgtgctaaattctcacagcatttgttgatttggaatttacattattatgataaatttttgtctactaaagcatatacttgatggacaagtgcagtgatgaatcatttgctgtgtcattacttgttctttctgtggatattaagttattcctatcgcatagttacatgataccttccatttttattatttaaatgtcattgggagtgtggtctcaactcagtcaactaatcatatcattctgattcctgaaggtaaaaaggtgacaaagggtaaaggagaatcagcagaagtaggtctacccagtaaggacgagctgaggaaaaccataactgaaatccttaaaaaagttgatttcaacacggtgagttacgtgtgttttatttagtgtactgaaaataccactacattgtttaacatcaccattgactgtttgctatcaatttatttgaattttgacctttacagtactgaaaagtatcttgaatggcttacgttaaaaaaaagcatcgaatttgtagtcaggatcttttttttttcaagggaaaacaggagaggaggtccattttaatttataaaggaattgtgtgcaaatgttgtagagagaatatttaagtccattagggacacagattaagcgtttattgaggcagcaagttgaaataatcatatactgctggctttgcttgatggataaccagcgcaatattgttttctaaattgatctattccttcctagaagatgccaaagatagctgtctctatcaaagatgctcctatggtgacgattctagataatgcagcatgcgaggatcatgaccgcttgtcctcgaaacacttctgtttgtgactgatatcttggatagagccaccacctcagaatggatattccatattgtacaaaattacagatgtccaatgtcattggctgaaacattcgaggctgctctgagtaagcctgggaaactatagtagcgcacttgcccttggcttgctgatgcttattgaagaagagagagactcaaaacctttgtttaacaacctgtccaagctgcagatgcccttttgaaataggactagtaccaaggatggtagctaactatgaaaggtgcatctaatcaaagtacaatatgtgtacaactgccatattttgagatatgcaaacacatgaaatgctgctgctgaaatgtaaccaacgctcagcactacccaaatcctcatgagcagttaatgctgctcgaagcctctgcagttgccatgggcgtactgcttatccacatcgtatggttccatgccataacattctggatgactgtaaacatatttgcgttcaagatctagtaaaatacaaaagctaaagcttagctatgacgggtaatctgaaagagtgggagctagtactagttatcttgactcaatgtgacaggcatttctacatttgttccgtgttgtagcttgagcttacagtttacagtttatacccccttttgttttgactgctttggtgtctagttgctcgcttctcttgttttttttttttacaccgtacactttacagaagagctgacatgtttggcaatctgattttgcaggctactttcagtgacattcttaaaaagcttggtaagcctttcaagcatgcctctcaatgtcaaccatgcttgtctttttttttctttttctggtgaagtgaagcatttttgtcataacttccatcaacaatcttcatcttgtagaggatcgctacaagattgacctgacaccacgaaagtcagctatcaaaatcatgatccaagaggagctaaccaggctgtcgaaagaagacgacgatgaggatgaggacgaggatggaaatgaagacgctgagaagaaaaaaccacaacatcaagccaaggaggtggtggcctgagctgagcattggtgaaacctcgtaggtttagcacccgctgttaattattatccgctgttaattattattttgtacctgcatgtatgccgaaccttgtgcttgcatcatgggcagcccccatgttaattattgttaatccgtgtccacagatagccaaaaaccatatccctgtttggtaatgtcaaaaacaaggttcgcttaggcagccctacacctgtagctgacttgggaggcaatttcttaggtaactgttgatgtccaaaaactctgcaatgggatgtggcagagcatcatgtaatgaatcatgttcgtcataggtttgaataacaagtggacgtattaggctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0596900, RefSeq:Os03g0596900