Difference between revisions of "Os03g0667100"

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(Created page with "{{JaponicaGene| GeneName = Os03g0667100| Description = BTB domain containing protein| Version = NM_001057385.1 GI:115454498 GeneID:4333666| Length = 7512 bp| Definition =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0667100|
 
GeneName = Os03g0667100|

Revision as of 19:40, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0667100

Description

BTB domain containing protein

Version

NM_001057385.1 GI:115454498 GeneID:4333666

Length

7512 bp

Definition

Oryza sativa Japonica Group Os03g0667100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27020120..27027631

Sequence Coding Region

27021627..27021630,27024529..27024754,27024876..27025067,27025523..27026282,27026498..27027037

Expression

GEO Profiles:Os03g0667100

Genome Context

<gbrowseImage1> name=NC_008396:27020120..27027631 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27020120..27027631 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacgtccaccataagcttctcctcctcgtcgccgccgtcccctccgccgccgcagccggctccgggcgacatcgacgccgtcagcctcggccgcctcagcaggaacctcgagaacctcctcgaccccgcctttctcaactgcgccgacgccgagatcgtcctcgcctccggaggcggcgaccccggcggcggcgccgtcgtgggcgtccaccgctgcatcctcgccgccaggagccgcttcttctacgaccacttctcctccgcccccgcccccgcccccgccaccgccggcgacaagccgcagctggacctcgacgggctggtccccggcgggcgccacatcggccgagacgccctcgtcgccgttctcagctacctgtacaccggccgcctcaggtcggcgccccccgaggccgccgcctgcctggacgacggctgcagccacgacgcgtgccgcccggcgatcgacttcgtcgtcgagtccacgtacgccgcctccggcttccagatctccgagctcgtctccctcttccagcgccgattatctgattttgtgaacaaagctttggctgaggacatactgccaattcttgtggttgcctccacctgccatcttccagagctgctaaatcaatgtatccagagggttgccaactcgaacctggacaatcgttacctcgagaagcggcttccggatgatctgtacgccaagctgaaggagtttcgcgtgcctgatgaaccacacagtggcattcttgaccctgagcatgagaagagggtcagaaacatccacaaggccttggattccgatgatgtcgatcttgttggcatgcttctgaaggagtccccggtcaccttggatgatgcattcgccatacactacgctgcggcctactgtgagccaaaagtgttagcagaattgctgaaactggaatctgcaaatgtgaacctgaagaactcaagtggatacacgccgctccacatggcttgcatgaggcgagaaccggatatcattgtttcgcttatagaaaagggggcctctgttctggaaaggacacaggatggacgtgatgctcttaccatctgcaagagattaacaagggagaaagaccgcaacgagaaatcagaaaaatgcaaggagagaagcaaggcttacttgtgcattggcgtcttacagcaagaaataaagaggagaccacaaattttggaggaccagatgtctgcagaggagtcaattgctacacctctgctggttgataattttcacatgaggctactaaacttggagaatagagttgcctttgcaagaatatttttcccttcggaagccaaacttgtgatgcgcatagcacaagctgactcaactcaagagtttgctggtctcacatctgctaatttcagtaaacttaaggaggttgacctaaatgagacccccacaatgcaaaacaggaggttgcgagaacgccttgatgctttgacaaaaacagttgaactcggacgacgatacttcccacattgttcagaagttctcgacaagttcctgaatgaagaatccaccgatttgatcttgcttgaaagtggcacagcagaggaccagcaaaccaagaggatgcgcttttctgaactcagagaggatgtacggaaggcctttaccaaagataaggcagccggcgctgcaatatcttcctcaacatctgcgtcttcatcaccaagttga</cdnaseq>

Protein Sequence

<aaseq>METSTISFSSSSPPSPPPPQPAPGDIDAVSLGRLSRNLENLLDP AFLNCADAEIVLASGGGDPGGGAVVGVHRCILAARSRFFYDHFSSAPAPAPATAGDKP QLDLDGLVPGGRHIGRDALVAVLSYLYTGRLRSAPPEAAACLDDGCSHDACRPAIDFV VESTYAASGFQISELVSLFQRRLSDFVNKALAEDILPILVVASTCHLPELLNQCIQRV ANSNLDNRYLEKRLPDDLYAKLKEFRVPDEPHSGILDPEHEKRVRNIHKALDSDDVDL VGMLLKESPVTLDDAFAIHYAAAYCEPKVLAELLKLESANVNLKNSSGYTPLHMACMR REPDIIVSLIEKGASVLERTQDGRDALTICKRLTREKDRNEKSEKCKERSKAYLCIGV LQQEIKRRPQILEDQMSAEESIATPLLVDNFHMRLLNLENRVAFARIFFPSEAKLVMR IAQADSTQEFAGLTSANFSKLKEVDLNETPTMQNRRLRERLDALTKTVELGRRYFPHC SEVLDKFLNEESTDLILLESGTAEDQQTKRMRFSELREDVRKAFTKDKAAGAAISSST SASSSPS</aaseq>

Gene Sequence

<dnaseqindica>6002..6005#2878..3103#2565..2756#1350..2109#595..1134#agcgagagaaaaatacacgcgcgaaatttccggataagagcagcgccggcggcggatgtaggcagcgtttgctgttgctgtttttttccctttttttccgtctcgttttgctcccacttcgctgctcccggatccgcgtagggttcttgtgtcgtgtggtggggttatgacccgcggcgctgctctgctttgctcgatttgctgtgcttgccttggaggtcgcctgcttggctgcttttgagagtgagtgtgtgtgtgtgtgtgttttttttttatacctcttttctttttctgggagaatttcccgttcttgggtttggtcttttttgcgaacctttgaaccctttcttgttggattctggggggaagtttatttatgcttaatttggcggttcttgttttgtttcggggagtttagaaaattttcgaggctttgattcgttttgattttgggtggggggaatctcgtcgtgcgaaaggattcgatcgggagagcctaccggagtttggattctcgcgtgcaccaccgcgagaattatgaggggagaagtgagcttctagctagcatctagaaccttctagactctcctcgccatggagacgtccaccataagcttctcctcctcgtcgccgccgtcccctccgccgccgcagccggctccgggcgacatcgacgccgtcagcctcggccgcctcagcaggaacctcgagaacctcctcgaccccgcctttctcaactgcgccgacgccgagatcgtcctcgcctccggaggcggcgaccccggcggcggcgccgtcgtgggcgtccaccgctgcatcctcgccgccaggagccgcttcttctacgaccacttctcctccgcccccgcccccgcccccgccaccgccggcgacaagccgcagctggacctcgacgggctggtccccggcgggcgccacatcggccgagacgccctcgtcgccgttctcagctacctgtacaccggccgcctcaggtcggcgccccccgaggccgccgcctgcctggacgacggctgcagccacgacgcgtgccgcccggcgatcgacttcgtcgtcgagtccacgtacgccgcctccggcttccagatctccgagctcgtctccctcttccaggtaatcaactgttacccaaacgtgttctctgcactcatgattcactagcaacttcagtttcagaaaatttttattgctggatggtgttgtaaatttcctacaaattagcatgtgtttgcaaacaattcatcattttgtgttgaataagtagctgaataattacagacaaaaataggactcctctaagtcctaactatggggttcttatgtcgcagcgccgattatctgattttgtgaacaaagctttggctgaggacatactgccaattcttgtggttgcctccacctgccatcttccagagctgctaaatcaatgtatccagagggttgccaactcgaacctggacaatcgttacctcgagaagcggcttccggatgatctgtacgccaagctgaaggagtttcgcgtgcctgatgaaccacacagtggcattcttgaccctgagcatgagaagagggtcagaaacatccacaaggccttggattccgatgatgtcgatcttgttggcatgcttctgaaggagtccccggtcaccttggatgatgcattcgccatacactacgctgcggcctactgtgagccaaaagtgttagcagaattgctgaaactggaatctgcaaatgtgaacctgaagaactcaagtggatacacgccgctccacatggcttgcatgaggcgagaaccggatatcattgtttcgcttatagaaaagggggcctctgttctggaaaggacacaggatggacgtgatgctcttaccatctgcaagagattaacaagggagaaagaccgcaacgagaaatcagaaaaatgcaaggagagaagcaaggcttacttgtgcattggcgtcttacagcaagaaataaagaggagaccacaaattttggaggaccagatgtctgcagaggagtcaattgctacacctctgctggttgataattttcacatgaggctactaaacttggagaatagaggtcagcatatgtttatcttggtttgtcattttgaagctacgcttgtttgcaacaactaatagtttttctttccatcttttaccattcattgattatatcctggaatgtgttttgagaaattagtgctttttccttgtcttcaatttgcaagcatatgttctgatgagcttaatttgttgctgtattctcattaacctcagtgggcataagttctatcggtactaatatgcatatattatctacatcaaagactactgaatgatttgtttcctttctttctttttttgtgatagcaatatgattcactaacttaatatgaaatgcagcagaaaagaaggaacctaattcagtatcagttgggattacaatgttgtagttttttcgcctttccagctagagactagaatacacaattctgaaaatcattcctgaagtatatttctgtgtctatgcagttgcctttgcaagaatatttttcccttcggaagccaaacttgtgatgcgcatagcacaagctgactcaactcaagagtttgctggtctcacatctgctaatttcagtaaacttaaggaggttgacctaaatgagacccccacaatgcaaaacaggaggttgcgagaacgccttgatgctttgacaaaaacaggtcatttttaactcgtaatcgtgcatctatatggttaatattctccggcattttgacagattaagcttccagagtaactcctgttctctgctgttactaaataaactcctgtatgttccagttgaactcggacgacgatacttcccacattgttcagaagttctcgacaagttcctgaatgaagaatccaccgatttgatcttgcttgaaagtggcacagcagaggaccagcaaaccaagaggatgcgcttttctgaactcagagaggatgtacggaaggcctttaccaaagataaggcagccggcgctgcaatatcttcctcaacatctgcgtcttcatcaccaaggtatgagacaaagttaagacctggcaacaagaaagggaagctatcacggtaatatcagcagttaagtctaatctgcagtgtagcttctgaaacatcatcatcttcaccaccaatgcttgatatacttgatataaaggggtaaacagggccttagaaagtggaagttaattatcattggtaatatcagtagttaagtccaatctgttcagcatgctcaacttcaggaaaggtggagaaggaaagtagggaggttgctttgacaagtaggggtgcaatggaattccaactatttatccaagaaaagcagcgagcatatctactaccagtacgactgtagtgtgattacttgtagtggctgtgatctgacatgacgtacggcattggcttttattatgctaagaagttggcaatggtcagtttcactttcacaatgattgtagccctcttgtatgttttaaccaatcaggccgtgtttacttcaccctcaactaccctaaacttccaactttctatcacatcatatcacataaaaaactttcctacacatataaacttttaattttttttccaaactctcaactttccccaaacttccaaattttttcaggaactaaacacaccctcagttcagtgctggtagagtatcatttttggtacgaattgacttccgctatgtctgaaaatgtttatgcggtaactttagcattactatatatataaccgtatatttagttcctttcttttctacttcctctgttcttaaaatatatactagctacttctaggctctagctatacaaatgacaattgtaatatggagaacttttgggacggaggtagtactatggagggatcagggatgtggccctagtctattgcaaggaaaactggagtagtaagaatgtgagtgttaaactgttgatttgggcactgatattcttccctttaaactgaaccaaattcagaatcagattaatacgataatcaatgaatcgattttatgcatttatataataaaatgtttgctagtgggacaaagcaaaacactagacatttgcattgcaaagaagtctgtcaggttaataattaaggtggttttactagtttgctcttcttactggactagcaaaatgcgtatgttttgctgtgagtaaaagaaaatgtataataatatgtcatagatagaatattttttaatcaaatatgttagtattacttttttaatatatatatatataggtaaattaatatatatatggtatccacttgattcaaacaaatattagactattgcataatataggaaagttttagagactaattttgtaaaattgtaaaagtagtagtgatggtggcagaaccaccaccatcactattgtatagattgtgaaaatgtgtccttgctaatttgaagatacaatagagtacatttgcactagagaaactacaaaatgttttcggaacaaaaaaactgtccattgtaagctgtgttatcaaaactaaactagttaaacggtttcctttcgggtctcatctcctcaaatgattggtgtcacatgcttgatctgtgatactagaaactacagtgcatctcttttcatccatgcatgtgagctattcttccctgtccccacagcactcgtgcagctctgcagggcaaagtactcgggttggcctgaatccaatggattagtagattcgcctaaacactgcgcagatagcatcatcatccgtcctagattactgtagctgcatgctgacatggttcaatcatcaaggagaagatacagatggatggcacaggattgatgagatggcgacatggcataattgctaaccttccgttaaaaaaaagaagacaaactttgggtttccatgtccaatgtttgactgtttgttttatatgaaatttttttataattagtatttttattgttgttacatgataaaacatgattaatactttatgtgtgacttatctttttaatttttttataatttcttttaaataagacggacgatcaaacgttagacacgaaaactcaaggtttgtctttttttttctgtttttttggacggagggaatagtttcattctgtaagagcatctccaatagatgactaaaattaaactcccaaaaatcctgtattggggacagccaaaaacatatttagcctaaaatacaccctcttctccaagagatgactaaaatttggttcccaaaattttaaaatttttccacatcatcattagtgggcccttcccaactaattttctacctgctcgttaaaatcacaggcgagagcggagggggagatcgcgtcgcgcgtgagaggcgaggaggagatcgcggcgtgcggatgcggaggggaatgggcatggtcgacgcgacgcacgcggacggaaggagatggctgctcatcctagtcgcgcgcgagatcgcaactgataccgttggcgaggttatatatcagacgcagcgatatacgaaattgatcgaaggacacagtgctatagacgcacatagagctcttcctctgtcagcgccggcggtgttagcacttcactcaatcagagctcttcctctgtcagggccggcgacgttagcacctcacttaatcaggcaactgcagcaagcagcaacgattggtgacaggcacaagctcttgtgcagtgcgtgagtagcaaaattttgctagcaaccatgttttttactttgttctatttcctttttttatgtttctgatctgacaatgtcttgatggaaaaaaaaacttaatttgatatgatgaataaatatttggaaaaacggaaggccaatcacattttttttaatttgatctgacaacgtcgcaaggggaaaaacttaatttattgtgatgaataatggtttggcagttgatttgatccaagatgagtcgacctcgctcctcgtttcaacagctcgtggatgaatcatcgtctgacgatgacgatgattttttttttgccacggcacaaatcgtccatagctattggcactctgtcaatgcaccaagacatggtgggtcagtcatgggacatgaagtgattgatcgcaacagagaagcacggcacttgagattataccaagactacttttctgataatcctacctatggcccagttttattcaggcgcaggtttgtataagtaaattttatataatttatttttgttatatgcatagatatgcatgtctcattagttatgattcgcaggaatagaatgagcaggcctctgtttcttcgcataatgaatgcagtagaggatcacgatgactattttgtgcagaagagaaatgcagctggtttaattgggttcagttgtcatcaaaaggtcactgcagcaatgcgtcagttggcttatggtatagcagcagatgctttggatgaatatctcggtattgcagaaagtaccgctatagagagcctgagaaggtttgtgaaagcagttgtacaagtttttgaacatgaatacttaagatcacccaatgagaacgatacaactcgattacttgaacttggggaggacagaggtttccccggtatgttaggctccatagattgcatgcattggaagtggaagaactgccctacagaattgcacggtatgtaccaagggcacgtgcacgagcctacaataattttagaagccgttgcttcaaaggatctctggatttggcacgctttttttggtatgcctgggtctcataacgatatcaatgtacttcatcgatccccgctatttgcaaagctagctgaaggcaaggctcctgaagtgaactatagtataaatagacacgattatatgatgggatattatcttgctgatggcatatatccttcttgggccacatttgtgaagaccataccagaaccacatggcaacaagaggaaatattttgccaaagcacaggaagcagtaaggaaggacgtcgaacgagcttttggggttctgcaagctcgatttgccattgttcgagggccagctcgacattgggatgaaaagactctgggatacatcatgaaagcttgtgttatcatgcataacatgattattgaagatgagggagaagttgattgggaagaacggttcccagagggaggagaaaatgtcagagtgtcccacgatgaaatacctgatcttgatgattttatccaaatgcacaaaaaaataagggacgacgaaactcactatcagctacgtgaagacctagtggagcacttgtggcaacattatccggataaatattgaggttttatttatatgtttgaattccatgtaataaataatatacatatgtgaggatttgccaaatcatcttaatttgtttttcatgaattgaataaatggtgtactgttcggtttaagaatagtacaggagaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0667100, RefSeq:Os03g0667100