Difference between revisions of "Os03g0670100"

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(Created page with "{{JaponicaGene| GeneName = Os03g0670100| Description = Similar to ATP-binding protein of ABC transporter| Version = NM_001057403.1 GI:115454534 GeneID:4333685| Length = 34...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0670100|
 
GeneName = Os03g0670100|

Revision as of 19:40, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0670100

Description

Similar to ATP-binding protein of ABC transporter

Version

NM_001057403.1 GI:115454534 GeneID:4333685

Length

3448 bp

Definition

Oryza sativa Japonica Group Os03g0670100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27205740..27209187

Sequence Coding Region

27206139..27206180,27206279..27206363,27206447..27206622,27206750..27206857,27207138..27207213
,27207303..27207364,27207464..27207541,27207653..27207748,27208160..27208288
,27208394..27208490,27208995..27209107

Expression

GEO Profiles:Os03g0670100

Genome Context

<gbrowseImage1> name=NC_008396:27205740..27209187 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27205740..27209187 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgccgtccatcccggcggctctccgccacccgcatgcccacgccgccggcctccgcctcctccgctcctcgggagacccctgcccgccctgcacccttccgtttaggttatgtggagtgccattaaaaaagggccatgtgtacgctggtgctgtatctgctaccaggagtcctggcttgggcaatgcagagaatctgcgtgagagtccaagcttgtcaaggagctggggtatgaatgggcagattggcgatgatcatgatattcttatagaatgtagggatgtgcacaaatccttcggtaacaagaaggtattgaatggcattagcttcaagattagacacggagaagccgttggaataattggtccttcgggaacaggaaagtcaactgttttgaaggttatggctgggctactggctccagacaagggcgatgttattatttgcggaagaaaaagacatgggctagttagtgatgaagacatatctggtgtccgaattggcttggtgtttcaaagtgcagctttgtttgattctctcacggttcgtgaaaatgttggattccttttatatgaaaattccagcctgcctgaggagagaatagctacactagtgacagaaacattggccgcagtaggcctaaaaggcgttgaagatcgaatgccatctgaattgtctggtggcatgaaaaagcgtgtagctctagctcgttcaataatatacgatgatacaaaggaaacaatagagccagaggttattttgtacgatgagcctactgctggacttgaccctattgcatccaccgttgttgaagaccttatacgttccgtacatgtaacagggaaagatgctcttggtaagcctggaaagatagcatcttatgtggttgtcactcatcagcatagcacaataaaacgagccgttgacaggttgttatttctccatgaggggaaggtagtgtgggaaggaatgacacaagaatttactacatcaacaaatcctattgtaaaacagtttgcatctggtagcttggatggaccgatacggtacttctga</cdnaseq>

Protein Sequence

<aaseq>MASPSIPAALRHPHAHAAGLRLLRSSGDPCPPCTLPFRLCGVPL KKGHVYAGAVSATRSPGLGNAENLRESPSLSRSWGMNGQIGDDHDILIECRDVHKSFG NKKVLNGISFKIRHGEAVGIIGPSGTGKSTVLKVMAGLLAPDKGDVIICGRKRHGLVS DEDISGVRIGLVFQSAALFDSLTVRENVGFLLYENSSLPEERIATLVTETLAAVGLKG VEDRMPSELSGGMKKRVALARSIIYDDTKETIEPEVILYDEPTAGLDPIASTVVEDLI RSVHVTGKDALGKPGKIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGMTQEFTTST NPIVKQFASGSLDGPIRYF</aaseq>

Gene Sequence

<dnaseqindica>3008..3049#2825..2909#2566..2741#2331..2438#1975..2050#1824..1885#1647..1724#1440..1535#900..1028#698..794#81..193#gaggaggattccatcgggtttccctttcttcttcctcgcccacgcgcgtggcgccgccgccgcagagctcgattcagaccatggcgtcgccgtccatcccggcggctctccgccacccgcatgcccacgccgccggcctccgcctcctccgctcctcgggagacccctgcccgccctgcacccttccgtttaggtaaaagaaaaatcatggcctgaatctcttcttcttctttttttttgtttcttagatgttttgtctaagttgttttggagcatctctcccgttaccttggggttgcgattctgtagggaatacaattgtgttggcagatcacggcttgttgttgaattgctcgagctgcgtgagtagattctttgctttcatcaacagttcagaggaggagaaagggagaaagcgattttgcactgtagttaaaaatttctttgcgttttttgatagctgaccccgattaggctgaaaaaattgcgaagcgcggttagtttggcagctggttaaattgctcatatgaaaagggaagaatgtggctgttgtgctgttcttgtgtagtactatgctggttcatcctgtgccatgttcatctttgtgaatatttatctgcagtattgcgtccaatgtgattggttttatcaaatgagatatggtattcatattttgcatatgttcttgcttaggcaggttatgtggagtgccattaaaaaagggccatgtgtacgctggtgctgtatctgctaccaggagtcctggcttgggcaatgcagagaatctgcgtgaggtatgctcttgcaacgatgccttgatcctgatatagcttacttgaattgcggtgccttggagtttgggggtgataaattgtatttttgttcccgtcatgctttagagtccaagcttgtcaaggagctggggtatgaatgggcagattggcgatgatcatgatattcttatagaatgtagggatgtgcacaaatccttcggtaacaagaaggtattgaatggcattagcttcaaggtaagttctttttcaagcaattctttccagtttccaattctcattggttctctggttttctacatcttgggcattatttgtaatcaactacttgggtgcctagtacatatcccatttcaagtattggagccactcaactgcatcttcttcaatgctgatcccagagttaatgtactttacaagtattcaaagcaaattggaagcacaaatcgaattgttgtcattctgaatttctgtttccttgctcatatagtcgtaccaccacaaattaaccactagttctcttacgttgatcatactctccattatccagtcactaggaatcattacttagttgattattttataatcttttggtttcatttatttttagcctgcagttcagttatggttcaaattattattatgtagattagacacggagaagccgttggaataattggtccttcgggaacaggaaagtcaactgttttgaaggttatggctgggctactggctccagacaaggttatcgcatcttcttgattatctttattaaaacaataggcttttaggaggttcccgtttgatgtgctgatggctgttgtatttttattttaaatctgtgataatgagaagggcgatgttattatttgcggaagaaaaagacatgggctagttagtgatgaagacatatctggtgtccgaattggcttggtatactctttaattacttcaaatctgccgaataaataccatgataattttatcgaccaactgttctcgaaaattctaaaatggtctttgcctatgaaggtgtttcaaagtgcagctttgtttgattctctcacggttcgtgaaaatgttggattccttttgtaagaacaattaccttccataagtctattgagagtagtcaatctacttgtatttactaatctcggtttcctctgtcctttggctttagatatgaaaattccagcctgcctgaggagagaatagctacactagtgacagaaacattggccgcagtaggcctaaaagtaagtcaagttttttttttttcatgttgaagttaaaactaagcatagaatagtcccaaattttggattagcggtaagccaatcgcaggcaatgcttttatgtgattgtgcaaagtttttgtcggagataatttaagaggcaaaattatagcttggattgttgaggaattctagatttctgtattagcttacataggatgaaaggattatcggtatttttctactcatacttgtgattttaacatagacttagatatattatcaccatcggtctgtgcagggcgttgaagatcgaatgccatctgaattgtctggtggcatgaaaaagcgtgtagctctagctcgttcaataatatacgatgatacaaaggaaacaatagagccagaggtataccctgactaatctcttcagtcattacgagtaaattgctgtaatagttcacaggaaaaggagatcaaacagcttaacttactattgactgtcttcttgatattatacattttttccattacaggttattttgtacgatgagcctactgctggacttgaccctattgcatccaccgttgttgaagaccttatacgttccgtacatgtaacagggaaagatgctcttggtaagcctggaaagatagcatcttatgtggttgtcactcatcagcatagcacaataaaacgagccgttgacaggtaatagcaggcattgttttgctggtggcttccagctttctgttgtccattgctaagctgagactcttgtactcaactttcaggttgttatttctccatgaggggaaggtagtgtgggaaggaatgacacaagaatttactacatcaacaaatcctattgtaaaacaggtaatgcagtaatgtcttaactgtgtgcctcacaagaaccaagtaaccttaatatactcgatcttgtgtctcactccatcgccatttgatatttgtagtttgcatctggtagcttggatggaccgatacggtacttctgagaattataatccaagttttcttaatgctccctgccctaccaacctgcacattctgccatatctacagaaggcatcccagaacaagaggacgacatgtgacttgtatctggttaccttaggcaggtctggaggtacacagcaaagtttctgccttggcattattaagcaaccaatagttgcgttagcacacaggaatataacccttgagatttgttggaccttgttaagtgaaataaacaggaagaagagcttgtaaaatggaacagtttgttggttgagttgtgtaaatgtaaccttgattgtagcagctgcttgggtgttggtgtcatagatgagagattctatattcaattattgataaaggctctacaattttgcgagccaaaatcgattggttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0670100, RefSeq:Os03g0670100