Difference between revisions of "Os03g0700700"

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(Created page with "{{JaponicaGene| GeneName = Os03g0700700| Description = Similar to Lipoxygenase (Fragment)| Version = NM_001057530.1 GI:115454788 GeneID:4333823| Length = 6126 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0700700|
 
GeneName = Os03g0700700|

Revision as of 19:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0700700

Description

Similar to Lipoxygenase (Fragment)

Version

NM_001057530.1 GI:115454788 GeneID:4333823

Length

6126 bp

Definition

Oryza sativa Japonica Group Os03g0700700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28867605..28873730

Sequence Coding Region

28868506..28868736,28870716..28870959,28871055..28871393,28871502..28871587,28871684..28871791
,28871937..28872244,28872330..28872593,28872693..28873476

Expression

GEO Profiles:Os03g0700700

Genome Context

<gbrowseImage1> name=NC_008396:28867605..28873730 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28867605..28873730 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtcgacggcggcgggggagtcggtgttccgggtggcgttcgagtgggacgagtcgcaggggatccccggcgccgtcgtcgtcaccaactccaaccggtccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtcttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttcttcgccaacgatacatatctgcctagcaaaatgcctgcacctttgatcccttaccggcaagaagaactcaacattctacgaggggacggtaaaattggaccatacaaggagcatgaccgtatctaccgttatgattactataacgaccttggccaaccagacaaaggcagtaaactagtacgaccagtcctcggtggcagccaagaactcccctatccccgtcgaggcagaactggccgggccccaacaaagactgacccaaatacagaaagcaggcttcctctgctggacttgaacatttatgtcccacgcgacgaacggttcgggcacctcaagatgtcagacttccttgggtactctcttaaggctattgttgagggtgttctcccaataataaggacctatgtcgatacgacaccaaaggagtttgattcttttcaagacatcatggaactctatgaaggtggattgaaagtggccaatgcctctgcactagcagagatcaagaagagagttccctttgaacttattaagagtcttttgccagttgctggcgatcaagtcttgaagttacccctaccacatgttatcaaagaggacaaatttgcttggaggactgatgaggagtttgcacgagaaatgctcgcaggagttaacccagtgatgatcaagcgtctgacgaatttcccggcaaaaagtactctggatccaaatgtgtacggtgaccataccagcaagatcaccgaagctcacattaagcacaacatggagggcctcacggtgcaaaatgcactgaagggcaacaggcttttcatcctagaccaccacgatcacttcatgccgttcctggacaagatcaacaagttggacggtaacttcatatatgcgagcaggaccattctgctcctgaaggacgatggcaccctgaagcccctggcgatcgagctgagcctgccgcaccccgatggccagcagcacggcgccgtcagcaaggtgtacactccagccaacaccggcgtcgagagccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagctgatcagccactggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacgatgaacatcaacgctctggcacggcagacactcatcaacgccgatggcatcttcgagaagaccgtcttcccaggcaagtacgcgctcgagatgtcctccgtcgtgtacaagaactggaagttcaccgagcaggctctccccgtcgatctcgtcaagagaggggtggccgtgccggacccgacgagcccgtacaacgtccggctgctgatcaaggactacccgtacgccgtggacgggctggtgatctggtgggcgatcgagcggtgggtgggcgagtacctggccatctactaccccaacgacggcgtgctccgcggcgacgaggagctgcaggcgtggtggaaggaggtgcgcgaggtcggccatggcgacctcaaggaccaggactggtggcccaagatggacaccgtccaggagctcacccgggcgtgcaccatcatcatctggatcgcgtcggcgctgcacgcggcggtcaacttcggccagtacccgtacgcggggttcctcccgaaccggccgacggtgagccggcggccgatgccggagccgggcaccgaggagtacgcgaagctggagcgcggcggtgacgaggccgacctggtgttcatccacacaatcaccagccagttccagaccatcctcggcatctcgctcatcgagatcctgtccaagcactcctccgacgaggtctacctcggccaacgcgacacgccggagtggacgtcggacgccaaggcgctggacgcgttcaagaggttcggcagccggctggtggatatcgagaaccggatcaaggacatgaacggcaactcggcgctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacacgtcggatgtcaccaaggagaagggccaagggctcaccgccatgggcatccccaacagcatctccatctga</cdnaseq>

Protein Sequence

<aaseq>MKSTAAGESVFRVAFEWDESQGIPGAVVVTNSNRSEFFLKTLTL DGVPGKGTVVFVANSWIYPADNYQYERVFFANDTYLPSKMPAPLIPYRQEELNILRGD GKIGPYKEHDRIYRYDYYNDLGQPDKGSKLVRPVLGGSQELPYPRRGRTGRAPTKTDP NTESRLPLLDLNIYVPRDERFGHLKMSDFLGYSLKAIVEGVLPIIRTYVDTTPKEFDS FQDIMELYEGGLKVANASALAEIKKRVPFELIKSLLPVAGDQVLKLPLPHVIKEDKFA WRTDEEFAREMLAGVNPVMIKRLTNFPAKSTLDPNVYGDHTSKITEAHIKHNMEGLTV QNALKGNRLFILDHHDHFMPFLDKINKLDGNFIYASRTILLLKDDGTLKPLAIELSLP HPDGQQHGAVSKVYTPANTGVESQIWQLAKAYASVNDSAWHQLISHWLNTHAVIEPFV IATNRQLSVVHPVHKLLSPHYRDTMNINALARQTLINADGIFEKTVFPGKYALEMSSV VYKNWKFTEQALPVDLVKRGVAVPDPTSPYNVRLLIKDYPYAVDGLVIWWAIERWVGE YLAIYYPNDGVLRGDEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIWI ASALHAAVNFGQYPYAGFLPNRPTVSRRPMPEPGTEEYAKLERGGDEADLVFIHTITS QFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKD MNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI</aaseq>

Gene Sequence

<dnaseqindica>902..1132#3112..3355#3451..3789#3898..3983#4080..4187#4333..4640#4726..4989#5089..5872#tgacttgtgatctgcgaggatgcaggtgcaggggttctttgacaggttgacggggaggaacaaggaggcgtggaaggaagggaggatccgtgggacggcggtgctggtgaagaaggacgtgctcggcctcggcgacttccacgcctccctcctcgacggcgtccacaacatcctcggccacaaggagggcgtcgccttccgcctcgtcagcgccaccgcccgcgacccaagtaagcaccgccgccgccgccgccgctcgccggccaaagcaaaacgctcatcgtgcgtgcgtttcgtttcgtgtttttttttttttggtgtgtgcgtgtttccgctccaaagcttttgcctcggcgtgattggttggttggttgattcgtttcctgaacaggagaaacagccgcgttttctctggctggggtttccgtttaattgctctcgctaatagcttaattacaaaccggtatttgcagtcttcaagcgttgtttgcaagcttttcctcggaaaaaaagcgtatagtagtagtacaaatttgaagtgtgcggtttggttgttgtcacgcattcaatgctacttccgtagagaagaaaggaagggaacattaattagtggagtgatgggaggaggcagcattgacggtcaacgtcaacacacgtcccttaacccctcaacaatctacaatcaaatgtgattaaatgtgattaaatcaaatcaagaaaaggacacccaattccattgatcgtcctgtcgatttgtcccccacttcatcgatggatctgttttttcaaaattttctttctatctctttccaattttttgtctaatttttgtggatggacaggcaatggagggagggggaagctggggaagccggcgcacctggaggagctggtggtgacgatgaagtcgacggcggcgggggagtcggtgttccgggtggcgttcgagtgggacgagtcgcaggggatccccggcgccgtcgtcgtcaccaactccaaccggtccgagttcttcctcaagacgctcaccctcgacggcgtccccggcaagggcaccgtcgtcttcgtcgccaactcgtggatctaccccgccgacaactaccagtacgagcgcgtcttcttcgccaacgatgtgagtccactcctagtcctcctcttggtcaacggtcatcttagttacagtagaagcctagtagtactactccattttcatttccagatggacattgccaatgccactgctcttctgcagtgttgctcaaagaccatagttaattcttgctaatgagcagtaccgctacatcttaagctaaagaaagatgagaacttgcttaagagccttgagctaaaccgctgacattaactatataagccttgagctcccttgctattaggaatattgaaatcaacatgcaaattctagtggtctaatcaatacgagaacatagttgtttgtgccaaagtttgcaattgatgaactatgtacggttcagtagtttggttgcagtaaggaattttcgttcaggtgggggtctttcagccgaccatgaatgcatgatgataatggatgatacttagaaaaattcaaggcaaagttttcataattgcactgaacgagggtttctgatcggatggtccatgccaagtaatcttggacacgtcacttagaaaattgattactgcagacgatggtacaataattgatgaccactttctgcagacaatatgatggctgcagagtgcagatactaatagaaacatcaggaacagtatgaatcttggacatatgacatcttacatgtgcatgaaaatatgtaaatgcctctacagtgactggagataggcggctatcaccaactcatggatttagatatcgcaatgcctttagaaatccttgaaaagctaaacaaacctatgccatttttttgtcataacatatatttatggattatatattggatcatggtcaactttcgtttttgaagtgtttgttggattaggtaccgtgatagctgtacctagatccaaatagcatatgcatatccaccttgtctcctggaaataactgtgatctagaatttgatcgtatcttttcttaatttactacacctatagattaatagatagcatccttgtccagtctgtcagcaggttaggagtatagaagctgacttgacttccactatgatctacaacagggaaagaaagttggatagaacagctgataagttgagttactagcagtttttgagcttggtgctgcagtctagtcaaccgtccaactgtccatagtgatgtccgggattcagggcttcccacaataaacatatagtggaaataacatcctgtactctacaattggctgtataaaaatgaagttgttctttttcaagttatggcatcgacaactactcgtaactcatgaatggtacatgctagtctttattattaaaatgatcctacattcctactgtcaaatcatgcaagacatcacatagctagaaaattacacctgctgagttccattttgaaaatgacagtccttttactagccactttttgtttgattcttcaaaatgattgaatgcgtcttgtgctacttgtcctagacaacaccaaactgaatgcccacagacacaaagccaccaaccgctcgttcgtccctattagcgacctggtcttacaagcaaacaaaagaatagtttagcttggtcaccactcacctgtgtgctgtttaattaagcttttgtttatgtatcatgcatggcatatgcaatcgcttgatctacaactagttgatagaaataaaaaaattgaatgcttttcttttgtttatgaaaaaaaaaaacaagtaatagctgcctcgctgacaatcaaatggaggtcattgatactgcctgtattttctttcagttttaaagcatgagtagtaatataaattcactttctaattgattaattatagtaatataaattcactttccaattgattaattaatactcctgctattagggttttcacctgtcagcttatcttcttgatgagtgactgaaactgctcattctatttactaagtttatctgttgccttattttcttgctgttttgcagacatatctgcctagcaaaatgcctgcacctttgatcccttaccggcaagaagaactcaacattctacgaggggacggtaaaattggaccatacaaggagcatgaccgtatctaccgttatgattactataacgaccttggccaaccagacaaaggcagtaaactagtacgaccagtcctcggtggcagccaagaactcccctatccccgtcgaggcagaactggccgggccccaacaaagactggtgagttatagatatcatgcattttcttcaatttgaatttatggcaccttgcaactggttccctcaaattcttttcttgctcaatattttctcagacccaaatacagaaagcaggcttcctctgctggacttgaacatttatgtcccacgcgacgaacggttcgggcacctcaagatgtcagacttccttgggtactctcttaaggctattgttgagggtgttctcccaataataaggacctatgtcgatacgacaccaaaggagtttgattcttttcaagacatcatggaactctatgaaggtggattgaaagtggccaatgcctctgcactagcagagatcaagaagagagttccctttgaacttattaagagtcttttgccagttgctggcgatcaagtcttgaagttacccctaccacatgttatcaaaggtaaccagctttctgcatgagcataactctgtatggttataccttattgggtaatttgattctgttcatatttggtattatcacaacttattgtttatgatgtttcagaggacaaatttgcttggaggactgatgaggagtttgcacgagaaatgctcgcaggagttaacccagtgatgatcaagcgtctgacggttagtaacttcatcgttgtaggatatgcaagtatgtgcatctgtgctcgcataatggagtgagtaatcttttttttgttctccaactgatcatagaatttcccggcaaaaagtactctggatccaaatgtgtacggtgaccataccagcaagatcaccgaagctcacattaagcacaacatggagggcctcacggtgcaaaatgtatgctgaatcactgacatacaaagcgaaacatttcagctctaaacatgcatgctatatctttgaaatgcaaataactcgtatatgactatactagaactgcatacactcaggagattgaccaataagtaaccatgctatgcaggcactgaagggcaacaggcttttcatcctagaccaccacgatcacttcatgccgttcctggacaagatcaacaagttggacggtaacttcatatatgcgagcaggaccattctgctcctgaaggacgatggcaccctgaagcccctggcgatcgagctgagcctgccgcaccccgatggccagcagcacggcgccgtcagcaaggtgtacactccagccaacaccggcgtcgagagccaaatctggcagctcgccaaggcttacgcctccgtcaacgactctgcttggcaccagctgatcagccactggtacagagccagcctcctctgtttcgttttctgtgttggagtatgaaaaggaggctcatgatgtttttgcatgttgctgctgcaggctgaacactcacgccgtgatcgagccgttcgtgatcgcgacgaaccggcagctcagcgtggtgcaccccgtgcacaagctgctgagcccgcactaccgcgacacgatgaacatcaacgctctggcacggcagacactcatcaacgccgatggcatcttcgagaagaccgtcttcccaggcaagtacgcgctcgagatgtcctccgtcgtgtacaagaactggaagttcaccgagcaggctctccccgtcgatctcgtcaagaggtaaaaccaaaatgaatgacatcttgcaaagctctggctgatcagaacacggcaagaacaacgatgtgaccaggatgggttttgcttttgtgtgtgcagaggggtggccgtgccggacccgacgagcccgtacaacgtccggctgctgatcaaggactacccgtacgccgtggacgggctggtgatctggtgggcgatcgagcggtgggtgggcgagtacctggccatctactaccccaacgacggcgtgctccgcggcgacgaggagctgcaggcgtggtggaaggaggtgcgcgaggtcggccatggcgacctcaaggaccaggactggtggcccaagatggacaccgtccaggagctcacccgggcgtgcaccatcatcatctggatcgcgtcggcgctgcacgcggcggtcaacttcggccagtacccgtacgcggggttcctcccgaaccggccgacggtgagccggcggccgatgccggagccgggcaccgaggagtacgcgaagctggagcgcggcggtgacgaggccgacctggtgttcatccacacaatcaccagccagttccagaccatcctcggcatctcgctcatcgagatcctgtccaagcactcctccgacgaggtctacctcggccaacgcgacacgccggagtggacgtcggacgccaaggcgctggacgcgttcaagaggttcggcagccggctggtggatatcgagaaccggatcaaggacatgaacggcaactcggcgctcaagaaccggaacgggccggtgaagatgccgtacatgctgctgtaccccaacacgtcggatgtcaccaaggagaagggccaagggctcaccgccatgggcatccccaacagcatctccatctgagtctcgcgtgcattctttagatcgatatacgtgtgctattgctagtgttgcgcgtttgccgtcgtcgatttgtttcattgtttgtatcagtgtgcattaccgtgattcttcgtagttcagggtctcagggataagtcgttgcaaatgtgagtaaccttgaggcatggataatttcattaggaattattcacatggaataatgaaagttaataaaatcattttgctttcagagtttgtttcaacttttatgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0700700, RefSeq:Os03g0700700