Difference between revisions of "Os03g0719900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0719900| Description = Similar to Peptide transporter 1| Version = NM_001057633.1 GI:115454994 GeneID:4333931| Length = 5273 bp| Definitio...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0719900|
 
GeneName = Os03g0719900|

Revision as of 19:42, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0719900

Description

Similar to Peptide transporter 1

Version

NM_001057633.1 GI:115454994 GeneID:4333931

Length

5273 bp

Definition

Oryza sativa Japonica Group Os03g0719900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29946917..29952189

Sequence Coding Region

29947125..29947947,29948279..29948835,29949231..29949448,29949542..29949647,29950386..29950463

Expression

GEO Profiles:Os03g0719900

Genome Context

<gbrowseImage1> name=NC_008396:29946917..29952189 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29946917..29952189 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaggtgacggtggtccgtgcggagcgcgaggaggagtccaccctggagcagggtctcctcgccatcccggaggaatccaaccaacttacatacactggagatggatctgtcgacttttctgggaatcctgttgtgaaggagagaactggtagatggagggcatgcccatttatcttaggtaatgagtgctgtgagcggttggcctattatggaatctccacaaaccttgttacatacttgacaaagaaactgcatgatggtaatgcttctgctgctagcaatgtgactgcatggcagggaacttgctacttaactccccttattggagctatactggctgatgcatactggggaaggtattggactattgcaacattctccacgatatacttcattgggatggctgtactgactctttcagcatcagttcctacattcatgcctccaccttgcgaagggtccttttgcccaccagcaaatccattgcagtatactgtcttttttcttggactttacctaattgctcttggtactggtggtattaagccctgtgtctcatcctttggagcagatcaatttgatgatacagacccagttgagcgaatccagaagggatctttctttaactggttctatttctcaataaacattggtgctctcatatcaagcagttttctggtttgggtgcaagacaatataggatggggaataggctttggcattccaacaattttcatggggctggccatcataagtttcttctctggaacatcactttatagattccaaaagccaggcggcagtcctattacacgagtatgccaggtggttgttgcctcctttcgcaagtggaacgtacatgttccagaggatagctctcgcttgtatgagttgcctgatggggcttcagcaattgaagggagtcggcaattggagcacaccgatgaactcagatgtctggacaaagctgctacaattactgatcttgatgtgaaagcagatagctttacaaacccatggcgaatatgcactgtgactcaggtggaagaactgaagatattggtaaggatgttccctgtctgggcaacgactattgtgttttctgctgtctatgctcagatgtccaccatgtttgttgagcaagggatgatgcttgatacatcagtaggtccattcaagattcctccagcatctctatctacctttgatgtggtaagtgtcattatatgggtccccctctatgatagtatcttggttccaatagctaggaggttcactggcaacccgaggggctttacagagttacagaggatggggattggtttggtaatctcaatcttttcgatggcggcagctgcagttcttgagattaaaaggttggacattgcaagggctgaacatttggtggatcaaaatgttccagtaccactgaacatctgctggcaaattcctcaatatttcttggttggtgcctcagaggtcttcacatttgtcgggtcacttgagttcttctatgatcaatcaccggatgccatgaggagcctctgcagcgcactgcagcttgtcacaacagctcttgggaattatctcagtgcattcattttgacattggttgcgtacttcacaacaagaggaggaaatcctggatggattcctgataacttgaatcaaggtcacctagattatttcttctggcttcttgctgggctcagttttctgaactttgtgatatatgtcatctgcgcaaacaaatacaaaagcaagaaagcagcttga</cdnaseq>

Protein Sequence

<aaseq>MAEVTVVRAEREEESTLEQGLLAIPEESNQLTYTGDGSVDFSGN PVVKERTGRWRACPFILGNECCERLAYYGISTNLVTYLTKKLHDGNASAASNVTAWQG TCYLTPLIGAILADAYWGRYWTIATFSTIYFIGMAVLTLSASVPTFMPPPCEGSFCPP ANPLQYTVFFLGLYLIALGTGGIKPCVSSFGADQFDDTDPVERIQKGSFFNWFYFSIN IGALISSSFLVWVQDNIGWGIGFGIPTIFMGLAIISFFSGTSLYRFQKPGGSPITRVC QVVVASFRKWNVHVPEDSSRLYELPDGASAIEGSRQLEHTDELRCLDKAATITDLDVK ADSFTNPWRICTVTQVEELKILVRMFPVWATTIVFSAVYAQMSTMFVEQGMMLDTSVG PFKIPPASLSTFDVVSVIIWVPLYDSILVPIARRFTGNPRGFTELQRMGIGLVISIFS MAAAAVLEIKRLDIARAEHLVDQNVPVPLNICWQIPQYFLVGASEVFTFVGSLEFFYD QSPDAMRSLCSALQLVTTALGNYLSAFILTLVAYFTTRGGNPGWIPDNLNQGHLDYFF WLLAGLSFLNFVIYVICANKYKSKKAA</aaseq>

Gene Sequence

<dnaseqindica>4243..5065#3355..3911#2742..2959#2543..2648#1727..1804#gttgatggtagtagacggcttcagaatttgagtgcaggactgttaacattagggagcttctgtacacgacgaagcatgtatctccccatctgagacagacaattcttcgagtgcgaagcatccgtggcacttctatgtgcacgattcctcgagtgctacaaacggtttcgctaccaacaacggctcgtgttcttctgaaggaatctgacgtgacgtgcagcggcagggcacttgactgaccgatgagttcgttgctttcccggcccgtttgccactcctggtacgcttcctccttggataatactactcctactactactatattttggtttctactaatgactattataatttttttgtgaaccgtagactttggtgttggctggcgttctaatcaatcaccaaacgttctactactgcatatactactcctatacctcttaaatattgcaccactagtactatataaaaatggttatgaaatgacactgatatgtactcagtaaaagggtgtttggaaactagggactaaatttagtccctctcataaaagcataaggtggtgtttggttggagggactaaagtggagctaaactttagtccctctcacaaaaaatttagccccactttagtccctccaaccaaacaccacctaaagtgaccaacattttacttttatagtactccgtattaagcctcttgcagaaagtagggatctgctcggttactactgtagtaaggttgtgtttagatccaaagtttggatcctccttttccatcacatcaacctgtcatacacacataacttttcagtcacatcatctccaatttcaaccaaaatctaaactttgcgctgaactaaacacagcctaaacaaatctatttctataggttaacctactccctccgtaaagaaaaataaatcaaaacccaaaatcggttttttttacgaagtacgtgttttccaaaagactattatgatataacttgtcacgcatttattcccaaatacgaccatagctaaaattttgattgagagaaacaaatttactcatgataacatggataaatctatattagtttatttttaattttacggtattctaaatttattctaaattctactactagcttaaaaattaaaatatcatatataataaccaacctaatagcccacccacacaacagtcaattatagatctatattacatcattaatatctaacttactcacctctcacataatagtagtttattagagtacgtattacagcttatgaatctattcatttcttctctcattcatgtgtcatttacatcatctttgttatactcagctttaagatgtacactacatattttttttctcacaaatttgttatactcactttaggatttacactgcatatttttcccacaaaaaaactctgataccctcaccaactaccagtcagaacccgtttctatcacagaacaatcgtagcgaggggaggggaaaaagacgaccccgaatcgccttaagacagtgggtgttcttgtcgtgcgcttcaccgtttgtcttgttggacccggagaccccacatatccagatctgcaagcttcctcctcctccttcctcctgatcctttagcttcctatatacgattccaccatcgaaggccagggcccagacttgcttgccgcaggttactgatccaccgaaggagggaggcgcccgcccgccgccatggccgaggtgacggtggtccgtgcggagcgcgaggaggagtccaccctggagcagggtctcctcgccatcccggaggtgagtttgaatccgccctctgtttctttggcgcgccggcggtgaatcagcgatcgtgcttgtgaatcgtgttgagaatttttttttcgttcttttttttgggaggtgaatcgctgttttcgatttcagtgaggagtgaggaatatgttagggttgtttgtttaggtacaccaccttaagtcttcggctgagcggaaaattggaagggaaatatttctcttctatgtattcgatatcgattcgtggaagttaactttgctgaacaatcgtccctacttatagctttttttttaaaaaaaaaacaactaatatctgtttgttctatttttcttaatttttaagcaaaaaaaaattctggcttgtggattattcaactcctgtactgcgcaatatgggaaaatggcatccttgtcctggaaggacttacgataattttggctgccgcatgccaacgcaactacctaggaaccagcatagtgctgcagcagtacagctgcttcctttgcgtctgaactctgaatgttgaagtcaagtatacagtttagatttgtggtcttactgaattgatacattattcagtcagcaatgcacatttaaacttaagttactctgtgacgactgtcaatgcacattgatttcttaccgagttaaaagttctctatagtcattataagctgttcagttattgcccaacaaaaattgtttgatgagatggcactgtaaatatctttattccaggaatccaaccaacttacatacactggagatggatctgtcgacttttctgggaatcctgttgtgaaggagagaactggtagatggagggcatgcccatttatcttaggtaattttctaacactaatctacaaggtatcaaggtctattattatgtcggcatctgcaatgatatataattaactaccatcactgaccacaggtaatgagtgctgtgagcggttggcctattatggaatctccacaaaccttgttacatacttgacaaagaaactgcatgatggtaatgcttctgctgctagcaatgtgactgcatggcagggaacttgctacttaactccccttattggagctatactggctgatgcatactggggaaggtattggactattgcaacattctccacgatatacttcattgtaagtcatctttctcctgatattttatggtgtaccatgtatcagttcttttatggactcctcaaaatgaaagaagaaacatttattagctatgaatgtagaaatggtttgtgaatgtggtatatatatatacgctctcagattagtgagtatgtgatgcagcttctcaaacttaagatggcctgctgtactctttcccaattcttaaatgaactgctaggaagggtagagctgagtagatctgtttctttactgtctactgaataggcctgtaattcttgtgtacaagctctcttcataggctcatagctgtccgtatttgaactgctgaaccgaactgattctataatttgaccgggttacattgttatatttacatcatattttgattgtaggggatggctgtactgactctttcagcatcagttcctacattcatgcctccaccttgcgaagggtccttttgcccaccagcaaatccattgcagtatactgtcttttttcttggactttacctaattgctcttggtactggtggtattaagccctgtgtctcatcctttggagcagatcaatttgatgatacagacccagttgagcgaatccagaagggatctttctttaactggttctatttctcaataaacattggtgctctcatatcaagcagttttctggtttgggtgcaagacaatataggatggggaataggctttggcattccaacaattttcatggggctggccatcataagtttcttctctggaacatcactttatagattccaaaagccaggcggcagtcctattacacgagtatgccaggtggttgttgcctcctttcgcaagtggaacgtacatgttccagaggatagctctcgcttgtatgagttgcctgatggggcttcagcaattgaagggagtcggcaattggagcacaccgatgaactcaggtgtgttcctctctgagctaaaattgcagcagcagcagaccatagctcagtgcacaattcctagcagctcttggcccttgaagaactaggaaaatatattttctgaaagttattaggtgtagtgtttctcttcttctttttgtgatggttaacattttagttttgataaattgcgacttaaatattatagatactggccttttggcctagcgctttagaaaaaatagctaaatatttatgtttgacttttgatatctgctcgtcctctatttccatatttgccgagaaactaacgacctaacatatatactctcaatgatattcatttcagatgtctggacaaagctgctacaattactgatcttgatgtgaaagcagatagctttacaaacccatggcgaatatgcactgtgactcaggtggaagaactgaagatattggtaaggatgttccctgtctgggcaacgactattgtgttttctgctgtctatgctcagatgtccaccatgtttgttgagcaagggatgatgcttgatacatcagtaggtccattcaagattcctccagcatctctatctacctttgatgtggtaagtgtcattatatgggtccccctctatgatagtatcttggttccaatagctaggaggttcactggcaacccgaggggctttacagagttacagaggatggggattggtttggtaatctcaatcttttcgatggcggcagctgcagttcttgagattaaaaggttggacattgcaagggctgaacatttggtggatcaaaatgttccagtaccactgaacatctgctggcaaattcctcaatatttcttggttggtgcctcagaggtcttcacatttgtcgggtcacttgagttcttctatgatcaatcaccggatgccatgaggagcctctgcagcgcactgcagcttgtcacaacagctcttgggaattatctcagtgcattcattttgacattggttgcgtacttcacaacaagaggaggaaatcctggatggattcctgataacttgaatcaaggtcacctagattatttcttctggcttcttgctgggctcagttttctgaactttgtgatatatgtcatctgcgcaaacaaatacaaaagcaagaaagcagcttgagctaatcaggagttaaaagactgtcgtcatgggaatttcacttcaaaattctgtatatatgtgcacaaagtacatgttgaagcagcgaccgtaacaagagaactttaaccatcctgtactctgtatttgatgctactatacattttatactttttgttctgtagatattaatttattgaagctacttgtggaatgtagctttgcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0719900, RefSeq:Os03g0719900