Difference between revisions of "Os03g0726200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0726200| Description = Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor| Version = NM_001057668.1 GI:115455064 GeneID:4333967| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0726200|
 
GeneName = Os03g0726200|

Revision as of 19:42, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0726200

Description

Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor

Version

NM_001057668.1 GI:115455064 GeneID:4333967

Length

6142 bp

Definition

Oryza sativa Japonica Group Os03g0726200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30297801..30303942

Sequence Coding Region

30298006..30298217,30300488..30300569,30300709..30300741,30300849..30300969,30301624..30301716
,30302505..30302612,30302700..30302876,30302983..30303038,30303117..30303201
,30303605..30303711

Expression

GEO Profiles:Os03g0726200

Genome Context

<gbrowseImage1> name=NC_008396:30297801..30303942 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30297801..30303942 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtcgggtgggcgcgtggggggtggagaaggggaggcgggggaggcggcggaggtggcggtggcgatggtggataatgaggaggagatggcgcaggcgcaggcgccacccgcggcggcggtggcggcgagggagctggtggtggggtacgcgctgacgtcgaagaaggccaagagcttcctccagcccaagctccgcggactcgccaggaagaaagggatcctttttgttgctattgatcaaaaacgtccactgtcagatcaaggaccttttgacattgttctgcataagttgacaggaagggagtggcaacaattattggaggaatatagggaggaacacccagaagttactgttcttgacccaccaggtgccatagaacatctgcttaatcgtcaatctatgcttcaagaggtttctgaattggacctctcagattgtcatggtagagtcggtgttcctaagcagctgtttgttaatacagatccatcatcaataccagctgctgttatgagggctggtctatctcttccattagtggcaaagcctctggtggcaaaatcccatgagttatctcttgcttatgatccaatctccttgacgaagcttgagcctccgcttgttcttcaggaatttgtaaaccatggtggtgtcttgtttaaggtctacattgttggggatgcgatacgggttgtgcgtaggttttcgcttcccaacgttgatgtaggtgatttatcaaacaatgctggagtatttcggtttccaagggtctcttgtgcttcagccaacgcagatgatgcagatctggacccccatgttgctgaacttcctccaagaccacttctcgagatattggcaagagagctgcgccgacgattgggtcttagattgtttaacattgatatgattagagagcatgggacaagagatcggttctatgtcatagacatgaactattttcctgggtatggtaaaatgcctggatatgaacatgtattcaccgactttctgctgagtctagttcaaaaggagtacaaacgacgaccaagctatagctcatgcgaggggtga</cdnaseq>

Protein Sequence

<aaseq>MVSGGRVGGGEGEAGEAAEVAVAMVDNEEEMAQAQAPPAAAVAA RELVVGYALTSKKAKSFLQPKLRGLARKKGILFVAIDQKRPLSDQGPFDIVLHKLTGR EWQQLLEEYREEHPEVTVLDPPGAIEHLLNRQSMLQEVSELDLSDCHGRVGVPKQLFV NTDPSSIPAAVMRAGLSLPLVAKPLVAKSHELSLAYDPISLTKLEPPLVLQEFVNHGG VLFKVYIVGDAIRVVRRFSLPNVDVGDLSNNAGVFRFPRVSCASANADDADLDPHVAE LPPRPLLEILARELRRRLGLRLFNIDMIREHGTRDRFYVIDMNYFPGYGKMPGYEHVF TDFLLSLVQKEYKRRPSYSSCEG</aaseq>

Gene Sequence

<dnaseqindica>206..417#2688..2769#2909..2941#3049..3169#3824..3916#4705..4812#4900..5076#5183..5238#5317..5401#5805..5911#ctccctctccctcttgctctcctccacacggcgccctcacgcgcgccacctgtctctctctctctctctctctctctctctctcctcgccgctcgctcgctcgctcgctcgcgtggggaggagtcgctagggcttcgacctccgcattccgatctcgcgccgcgtcgctgccgatcggcggggtttggtgtttggtgttttggggatggtgtcgggtgggcgcgtggggggtggagaaggggaggcgggggaggcggcggaggtggcggtggcgatggtggataatgaggaggagatggcgcaggcgcaggcgccacccgcggcggcggtggcggcgagggagctggtggtggggtacgcgctgacgtcgaagaaggccaagagcttcctccagcccaagctccgcggactcgccaggtaggtactagcagatttgttcgcttcacgtttccgtcttgggatgatgatgatgaggaggaggaggaggaggaatttgggtgggaagaaggcgcttcttgtttgggatatttttgtgtgtgtgtgtgtgggtgcattgggggagggagggaggaggcgtttggtgtggctgtcctttctgtttgtttgtttgtttgaaactttgaattggatggaatcctctccatttttcccctttggattcgagagatcagagctgattctggatccttcttgctggctgtattgtgaggaggaagaggagaggtttgccgagcgtagtagtaaatagttcgttcgctgtcgctgatacctcgttcattgacctctgtgctgtgcttgacttgagtagattctgacacatattgtcctcctctctctttttttttctctctagttagtgatgaaaatgacttacttactttccactgtttctgcactattgtttgtgagctaaagattagcatgggtgttgtgccaaattaaaaatgggtgtcactttgcggttttaaaaggtcttaaaagtgggaggaaaggtgggggcttttctttgcgaaaattagatagtgcaaaagatggtgaaaggtgtggccttttcggcattggaacgtctgactgaatatctccttgtgatatgatctgatccatcatttctcgtgtgaaggtgggaggcgttgttgccaacgtttccaataacgatcgagcaatttttagagaatcatagaacatatatattcaatggaagggaaggaattggagttgcttagttttctagaatcaccccctgcactgactgacttaattacttaaataatagcaggtccatatcattcaagcacacctttgtattgcacctattttcttttgggataagaaagtgacatcgatgcattccctactgtgtggtagtattatattcgctcccgataggaaccctctcttaacttatctagtaatttagtcatattcctgaacttatcctgcaagtgtagaagtaacatgcacattctttatcttgaaatttctcaaaaccttgctgtgcatgattatgtacttgtgtgttttgtttgactgctttcattattgactgtgggaccatgctttgggatcgagtgtacatagagatccattagtccatcaattttacatgcatgattattatggcaatgcaaattttttttacctacaatttgtgtaatcttctggatgcaatttttttttatgtctggagtttcaccttacagtttcataatacatttttgcacacgcatcactaggaccaggacagggcgtggaatgacggcctggcaggcacgataagattgtggaataatttaggacccacacaataaacatttgcattgtcttttgtgcttgatgtggtccacatgcatcttgcaaatcaagtaccatatctccatccagtctgagaaagatggtgcttgattaaagctattcctttattacctgattagatttttatctttgatgccacctggtgattactattgtctttatgtcgtgacatttccatacaaggcatggattaagaacaacctacccttagttccttgtacccctatagtcaccaggaaatttggatttgccccattctcccaccatgtgcatgccaggtctctagtttgcacaaggataccttgcaattgtttgaacatatgttgtgtgtgcctgtgtccattatctgttctttttagctaaacaatgaattggaagtttgaatatgtccgtattctttttttagagaatatgcaggactgcctatctttgcattaaggaagaaggatgtgttcgtattcaaattgttcattcttttttatatagaaacaaatgccctgcaatgtccacctacatgatctacttagatgaggtttatcagtttcatctacttctccttatactttgtagacatttatttcaagctcttatgcctattaaaattgtatggaaccttgaaaacaagacttcaagaggttgagaacttaatagcatgcaactattgcagataggaacaatgatcttaaattgatttgaattatgaatagcatgttgtcaatgagatgttgaagctatatgttgactagctgccaatttctcctatttgcaactgtcgcagacctacttattttacgttttgtttgtggactatattttgcatgtttatctgtattatcggcaattcgatatctaagccttctgaaacatatttgcaggaagaaagggatcctttttgttgctattgatcaaaaacgtccactgtcagatcaaggaccttttgacattgttctgcataaggtttgataatattcgatgtatttaataccttgatgtattatatgtctggatgctgttaagtacttggaaaataggttgcttttcttagcttgtctttcatttcattgaaaactgaacgataaccttgtattctctacagttgacaggaagggagtggcaacaattattggaggtcagtaatccaaaacatgttaaaatcactgtcagacttctttttatgggaatttacatattatctgttccttactaatcttttattgactatgcctcatttggtaggaatatagggaggaacacccagaagttactgttcttgacccaccaggtgccatagaacatctgcttaatcgtcaatctatgcttcaagaggtttctgaattggacctctcagattgtcatggtaatttctataaatggcttcttggttctggtttggaagaaaacaatatgctatataaaacaaaataatttgcaatattaagtggacaactgcagtttttttacacgattagaataagttcaaagcaaccggcattagtttttccttgattagaaacataccatgaaaagaagggggtagactacctttgctatgataatgcaacagtttgtttggctctactggttaaaaataaagttaacttgggaatagtctcatatggagtctttacatgtttgtctaattaggtatggatgaagcatttgatgttctatgtgactgtcatctgtagtataaagcattgatttctcttctgttttttgtatccttggtggactagtaccttttaattcttttgttacatgaactggcatagttctcactgctgggccctttggattggagtagtattatgtatataacatttttttccagtagcagacattgttctaattgttagacttcatgtctttacacatttaaatatattaaaccttgttatttgcttccatctcagatttcctccattgtttgggagacttgatatggagaatttggttcttagaaccatcccaaaggctgatttcctcattatggtgcagttgctttttgcaggtagagtcggtgttcctaagcagctgtttgttaatacagatccatcatcaataccagctgctgttatgagggctggtctatctcttccattaggtgagtttgcttatctgttgattcacaattattgtttcctcttacgcatgctcataataattattggtttgttcctgagttgtatttaacagctttacatttttaagttacaatttgacgttctatgcagataggagcaaaacattatagttagttgcaatcatttttttgtagtcatcataagtggtatggtctctcactcagcatgatacgggactatgtttacttcaaaagaaaatctcaccaaaaccataactcgctgatgaatatgtatgtttcttctctctttccttcctagattcttgaacatgctggagcaagtttgtaacttctaccatcattttgcttccatttgttatctggtttatgtagtatgtatatcagatgggtaggaagctggtgagagatcagcatattatatacaatggaaatctgtatggtgaactatatagacaaaactaggaagattcaacaaaaatcttcaaataatttgaacatagtgaggaaggaagattaaggtctgtgtgtaacaaagtttccattgttctgcttgtgtattctcatttaaaggtcttactagaatcttatgtacgtggtacaacgctggcacttggttctggatgagatagagtcatcaacatctccattgtataaaaatgggaaatggtgacatagagtttaataaaatctacgcatactatgttcaactaattacatttgctgaattatgttttggggttcctagctgttattgttgtccatttgttaactacatatattatatgcagtggcaaagcctctggtggcaaaatcccatgagttatctcttgcttatgatccaatctccttgacgaagcttgagcctccgcttgttcttcaggaatttgtaaaccatggtaagtttctttgagttattttcccccctctgtttctattcactattcccaatcaatcccagattaacttggttttctcgtttgtaggtggtgtcttgtttaaggtctacattgttggggatgcgatacgggttgtgcgtaggttttcgcttcccaacgttgatgtaggtgatttatcaaacaatgctggagtatttcggtttccaagggtctcttgtgcttcagccaacgcagatgatgcagatctggacccccatgttgctggtaaacttccatacattggtttccatagctttacgcttattgatgtcattcattgttggttctagaaaatagtattgccaactaatgttcttccatattccctcagaacttcctccaagaccacttctcgagatattggcaagagagctgcgccgacgattggtactaatgatcctttgacttgtgtgttattatgcttaattaatgtcatgttgattaacccttttacctaacttacagggtcttagattgtttaacattgatatgattagagagcatgggacaagagatcggttctatgtcatagacatgaactattttcctggtatgtgatctaatatgtttcaagtatgtctaatttatccccgcaaaaaaaagtatgtctaatttatcttctcattattttcagctaacttgacccggcaaaaaaatttcagctaacttaatgtttatgggtttgaattagcaaacgatttccctcctatatcgtcgaaaatttcttttttgttatgctgctaggtaaaagtctaaattaatacactactgtagaagttgtggcacccacttgaaatgtcctctcttccgtatggcagctctcaataaaatcgggaaacaacatgatggcagtcgattattatactgaactctttacagaagtggccttcctttgctaaatggatagttcttatctcaattgtgaaagatgctcatcacctcttatcctgcagggtatggtaaaatgcctggatatgaacatgtattcaccgactttctgctgagtctagttcaaaaggagtacaaacgacgaccaagctatagctcatgcgaggggtgaaacgacgagcccttcaccgtgtcagtgtgtctcgaattcgctgtgtgtgtagtacaaatgtgaatgcaagaaggcaagagcaaatcctccgtggtaaagttgggcatcagtagttgcgataaagcagcgatgactgtgtcaagctgtaaattattagctcccgtttgctaacttctcttgttctcaaataattttgctcggctaattaatgaagttaagatgttacctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0726200, RefSeq:Os03g0726200