Difference between revisions of "Os03g0758100"

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(Created page with "{{JaponicaGene| GeneName = Os03g0758100| Description = Similar to Plastidic alpha 1,4-glucan phosphorylase 2 (EC 2.4.1.1) (Fragment)| Version = NM_001057865.1 GI:115455458 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0758100|
 
GeneName = Os03g0758100|

Revision as of 19:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0758100

Description

Similar to Plastidic alpha 1,4-glucan phosphorylase 2 (EC 2.4.1.1) (Fragment)

Version

NM_001057865.1 GI:115455458 GeneID:4334171

Length

6936 bp

Definition

Oryza sativa Japonica Group Os03g0758100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32182776..32189711

Sequence Coding Region

32183093..32183209,32183796..32183996,32184128..32184314,32184435..32184511,32184834..32185070
,32185143..32185271,32185423..32185575,32185685..32186140,32186218..32186335
,32186481..32186581

Expression

GEO Profiles:Os03g0758100

Genome Context

<gbrowseImage1> name=NC_008396:32182776..32189711 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32182776..32189711 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgacactcacccaacactgtgcattcctgagttgatgagaatattgattgatgttaaagggttaagctggaatgaggcttggagtatcacagaaagaactgtggcatacacaaaccacacggtgcttcctgaagctctggagaagtggagcttggacataatgcagaaacttcttcctcggcatgttgaaatcatagaaaaaattgatggggagctgatgaacatcattatctcaaaatacggaacagaagatacttcactgttaaaaaagaagattaaagaaatgagaatcttagacaacattgacctaccagattctattgccaaactatttgtgaaaccaaaagagaaaaaagaatctcctgctaaattgaaagagaaattgcttgtcaaatctctggagcctagtgttgtggttgaggagaaaactgtgtccaaagtagagataaacgaggactctgaggaggtggaggtagactctgaagaagttgtggaggcagaaaacgaggactctgaggatgagttagatccatttgtaaaatcagatcctaaattacctagagttgtccgaatggctaacctttgtgttgttggtgggcattcggttaatggtgtggctgcgattcacagcgagattgtgaaagaagatgtattcaacagcttttatgagatgtggcccgctaaatttcaaaataaaacaaatggagtgactcctagacgttggattcggttttgtaatcctgaattaagtgcaatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgctgaattaaagaagtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaaggctaacaaggtgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccagatgcaatgtttgacgttcaggtgaaaaggatccatgagtataagcgacagctgctaaatatccttggaattgtctaccgctacaagaagatgaaagaaatgagtgcaaaagacagaataaatagctttgttccaagggtatgcatatttggtgggaaagcatttgccacttacgtacaggcaaagaggatagtgaagtttattacagatgttgcagctactgtaaatcatgatccagaaattggagatctattgaaggttgtatttattccagattataatgttagtgttgctgaggcgctaatccctgccagtgaattgtctcagcatatcagtactgctggaatggaagctagtggaaccagcaacatgaagtttgcaatgaatggatgtatccttattggaactttggatggtgctaatgtggaaatcagagaggaggttggagaggaaaactttttcctttttggtgctgaggcacatgaaattgctggtttaaggaaagagagagcccagggaaagtttgtgcctgacccaagattcgaagaggttaagagatttgtccgcagtggggtctttggaacttacaactacgatgacttgatgggttctctggaaggaaatgaaggttatgggcgtgcagactattttcttgttggtaaagatttccccagctacattgaatgccaggagaaggttgataaagcataccgcgatcagaaactatggacaaggatgtcaatcctcaacacagccagttcctccaagttcaacagcgaccggacgattcacgagtacgccaaggacatctgggacatcaagcctgtcatcctgccctag</cdnaseq>

Protein Sequence

<aaseq>MNDTHPTLCIPELMRILIDVKGLSWNEAWSITERTVAYTNHTVL PEALEKWSLDIMQKLLPRHVEIIEKIDGELMNIIISKYGTEDTSLLKKKIKEMRILDN IDLPDSIAKLFVKPKEKKESPAKLKEKLLVKSLEPSVVVEEKTVSKVEINEDSEEVEV DSEEVVEAENEDSEDELDPFVKSDPKLPRVVRMANLCVVGGHSVNGVAAIHSEIVKED VFNSFYEMWPAKFQNKTNGVTPRRWIRFCNPELSAIISKWIGSDDWVLNTDKLAELKK FADDEDLQSEWRAAKKANKVKVVSLIREKTGYIVSPDAMFDVQVKRIHEYKRQLLNIL GIVYRYKKMKEMSAKDRINSFVPRVCIFGGKAFATYVQAKRIVKFITDVAATVNHDPE IGDLLKVVFIPDYNVSVAEALIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD GANVEIREEVGEENFFLFGAEAHEIAGLRKERAQGKFVPDPRFEEVKRFVRSGVFGTY NYDDLMGSLEGNEGYGRADYFLVGKDFPSYIECQEKVDKAYRDQKLWTRMSILNTASS SKFNSDRTIHEYAKDIWDIKPVILP</aaseq>

Gene Sequence

<dnaseqindica>6503..6619#5716..5916#5398..5584#5201..5277#4642..4878#4441..4569#4137..4289#3572..4027#3377..3494#3131..3231#gcggagcgtggcgagcgatcggggcgtgcaggggtcggtgtcgcccgaggaaggtacgcggctgggcgttgccggtggttctggttcgcgggggtgctggttggtcgtaatgtggttcgaattgctgtcgttggcgatgcggatgcgtgtgatcctcggtacgcgcgcgcgcgcgcgggtggggctgcgcggtggcggaattgtggtggcgtggggggctctgatgggtatttgttttcggtcgttagggttttcggatttgagggtcgcggcattcgcgaatgaactgcaaaatgtgtgttctagagttctattactctgagtttacgcggggagatgaactgggtgtttgttttgactgaactgcaatgattcagtgcgtaaaatgggaactctgttatttctgtatctcgaatagtaagttctgagaaacttctaggtgggatttgaggcattctaattgttcgtgagttcgtgtagaatatgtctggagtgtcttagaaagtcctctaaatttacagccgagaaatatattagtagatttcaatgctgggtgatttatgaaggtagttgtaacacagtagcaaaactgattttcaaatgaaaatgataatcaagtgatcaccaatatactcagcttaattttctatgaggtggttgaaacgtttaatcaaggcagaagattcaacaagacttggtagcaaccatcaaattttgtggtaaaggataaactgataaagtatgggatttaccttctgacagtaagtaggagatttgcacgtcattctatttcaagagaagaaaacagcaactggagcaggcaaaagctgcatcgttcttaatcactgtcccttgatcaagcagaaaggacatcagaataagaattacagcctaaaagtcaaagtttaatactatactaaatccctagaccactcaagcatacaacttgtcaagactagaagcatcagtactgtgggcttgtggaccgtgctaaatatccagggtgtttggaaagttcaagaatattagcattaacacaactattttcgcttcttttgttttaactgttaatgcatactattggtaagttttcttttatccatgtctattaataaatatatttttggatgctaaaactgttgttcttgtaatgcagagatttcaagtgtgctaaattccatcgattcctctaccattgcatcaaacattaagcaccatgcggagttcacaccagtattctctccagagcacttttcacctctgaaggcttaccatgcaactgctaaaagtgttcttgatactctgataatgaactggaatgcaacatatgactattacgacagaacaaatgtgaagcaagcgtattacctgtccatggagtttttacaggtctcatatgctgcttcctcaagcctcatctattacctttcagtgaatacattgcatcttatttggttgttcttttgtattgtagggaagagctctcactaatgccgttggtaaccttgagctaactggacaatacgcagaagcactacaacaacttggacacagcctagaggatgttgctacccaggtaagaaatttctagaagaggattgggatctttgtccatatataaaaaaagaccagcaggaaaattgtccatatcaaatttgtttcatgcaatttattatttaaatgcatgaaaagtggcattttttattaattcatttccttccctttgttctgaaactatctacaaaggaaaagctcgtttcctaccatgattcaccacctaacttatattcttcatgtagctatcagattaagtgactatatttaatttcaccaatagcttattgattcatagagttccctttattttagaaatattaagattggatatgctacttttgtaattgcaatcaagtaggagccagatgctgcccttgggaatggtggtctaggccggttagcttcctgtttcttggattctctggcaaccctaaattatccagcatggggatatggacttcgatacaaacatggcctctttaaagcaaatcatacgaaggatggtcaggaggaggtagctgaaaattggctcgaggtactgatatgccctttcattttttgctgcttgaaatccagaattttgattatgttgatatactgattatagcagctaaccatttatgacttcatacttatcttccagatgggaaatccttgggagattgtaagaaccgatgtctcctatcctgtgaagttctatggtaaagtggttgaaggcactgatgggaggatgcactggattggaggagaaaatatcaaggttgttgctcatgatatccctattcctggctacaagactaaaactaccaacaatcttcgtctttggtcaacaacagtgccatcacaagatttcgatttggaagcttttaatgctggagatcatgcaagtgcatatgaagctcatctaaatgctgaaaaggtattattttcccatgttatccttttcagcacaaagcataactcttcgtcagactatttgaaaggctaaaagatatctcatgcacccaacaacattttgatttgattcacacaattgtttaagaactattcaatcaaatcacagagagtaaatccatgtatattgctcctctgaatcaatagatcgagactgatgggatatggtcgcatccactaggctagttagcacatgttcttttctcttgaaaatagttagcacatggtgaaatggcttttgaagtggaagccccatacctcaaggcatgtgaattgtatttattaccgcattcttatttgtgtcattcattctcaattatggtttattttgtgtattgggttttgtgccacattatgaactagtattgctcattgccatcactgtggtcaaacttgatgagttatttaatctcttaagttttattcgcttgttttctcatcataccagatatgtcacgtactgaatcctggggacgaatcaccagagggaaagttcttcgcctgaagcaacaatatacattatgctcagcctcactacagggatattattgctcgtttcgagaggagagctggtgattctctcagctgggaggacttcccctctaaagttgcagtgcagatgaatgacactcacccaacactgtgcattcctgagttgatgagaatattgattgatgttaaagggttaagctggaatgaggcttggagtatcacagaaaggtattcaccaccaaattagctaatcttgaaacctattagagtctgcagctttatgtgttcagtgttccaccagtccaaatagccttaatttacttcctcatttatcctccattaaatgttgtactaattttgaaatattttccagaactgtggcatacacaaaccacacggtgcttcctgaagctctggagaagtggagcttggacataatgcagaaacttcttcctcggcatgttgaaatcatagaaaaaattgatggggaggtaccacatgtgcacaaaacttacacagttagcttcatgctctgtagacccacttatgttttcttgttttgaaacagctgatgaacatcattatctcaaaatacggaacagaagatacttcactgttaaaaaagaagattaaagaaatgagaatcttagacaacattgacctaccagattctattgccaaactatttgtgaaaccaaaagagaaaaaagaatctcctgctaaattgaaagagaaattgcttgtcaaatctctggagcctagtgttgtggttgaggagaaaactgtgtccaaagtagagataaacgaggactctgaggaggtggaggtagactctgaagaagttgtggaggcagaaaacgaggactctgaggatgagttagatccatttgtaaaatcagatcctaaattacctagagttgtccgaatggctaacctttgtgttgttggtgggcattcggttaatggtgtggctgcgattcacagcgagattgtgaaagaagatgtattcaacagcttttatgaggtatttacatggcgttatttggaattgggatacttttttttcatttatttccctgcttctataatcatccaattatatgacattcaccatcttcccattttgctgacagatgtggcccgctaaatttcaaaataaaacaaatggagtgactcctagacgttggattcggttttgtaatcctgaattaagtgcaatcatttcaaaatggataggatctgatgattgggttttgaacactgataaacttgctgaattaaagaaggtacttctagacattcagttatatctgtttgcaattttaagtgatgcacctttttaaataattccttcactccattgttacctattccttacttttatatatttctgttaattcatcttgctattttttgctgatattcatcctgctacagtttgctgatgatgaggatctgcaatcagaatggcgtgctgctaaaaaggctaacaaggtgaaggttgtttctctcataagagaaaaaacaggatatatcgtcagtccagatgcaatgtttgacgttcaggtatatttaataggaagcattttcattctatcatgtattggttcacttagtttttgtcacctggattcacaggtgaaaaggatccatgagtataagcgacagctgctaaatatccttggaattgtctaccgctacaagaagatgaaagaaatgagtgcaaaagacagaataaatagctttgttccaagggtatgcatatttggtgggaaagcatttgccacttacgtacaggcaaagaggatagtgaagtttattacagatgttgcagctactgtaaatcatgatccagaaattggagatctattgaaggtattgtttttctctctttaaattcacctgtcatcttcattttcatctgtgtcatagaaatatggctttgactaataacccagctgccaaaggcatccaattgtttgattatctatggacattttttttccctgatctcaacgatataaatttggcacttttatctatgggcccataacagaggtcgtaccgtcgtagtatatccatgaatttgattctatttgtttttcttatactatagaaataagcatcagtattgaaaactcagtaatttccttatgctgcaatcagagaactaactgtgatatgcttttttgtcaaggttgtatttattccagattataatgttagtgttgctgaggcgctaatccctgccagtgaattgtctcagcatatcaggtaataatctggctacatttcagtctacagattcacagaaaaactctcctgcctattagaatgtagagtttttgccagactgccaactgtaagtgtttctacaaatttaatttcacgcagtactgctggaatggaagctagtggaaccagcaacatgaagtttgcaatgaatggatgtatccttattggaactttggatggtgctaatgtggaaatcagagaggaggttggagaggaaaactttttcctttttggtgctgaggcacatgaaattgctggtttaaggaaagagagagcccagggaaaggtatcactcgttttctttggatcatcatatcactcttggtcatgcagtcgcttatgatcaactcacaaagatagcatgagccagagtagtacaagcaacgttatgaccatgtcattttctttcacttgtagtttgtgcctgacccaagattcgaagaggttaagagatttgtccgcagtggggtctttggaacttacaactacgatgacttgatgggttctctggaaggaaatgaaggttatgggcgtgcagactattttcttgttggtaaagatttccccagctacattgaatgccaggagaaggttgataaagcataccgcgatcagaaagtaagtcctcttctttttgcgcactgcatgtgactattacataaacttcttgttttgtgaatttgtgtcttatgttctcaaaccggtgttttattactataaacatgaattaacaaattccataagcatggatgtgatgaaagagcaatgtaaactgtcagaaaatagtgtcgctggttatgttctctttctatgcatagaccattagacctgctgttaggctctttcatgtacatagctggccattcacttcaggcaagtgctcctatgctccctaaaaacctaaaaaaaaataaccaagcaatttatgggaatgttggggctaattctctagcaccgaatgaatgttttgaaatccgcaatttcatttctggtataaacataaaatgcactgctctgttagtttcttctctcccattttccctgcttggcactacatttcctcaagacatatcagatcatcatagttttcatacattcacattatagcatcttctattccgattgcagttaacattgtcaataacacatggggaactcaaattgtctatcctttctactcacatatccatctctctacctgcagctatggacaaggatgtcaatcctcaacacagccagttcctccaagttcaacagcgaccggacgattcacgagtacgccaaggacatctgggacatcaagcctgtcatcctgccctagacaggcaaggcaagcactagccactccctgccagcgaccttcagagctaaggtgcgcgcaaccggtgatgcgatgacagcatctgcctcccagctctccttggcaggaaggtttcgctttgctcccagttttgagtagacagaagcaagttcagttcaggcttcgataaaacgctggaactatgcaaattgtagccgtgttgcctagcctggaacacccttgttttacctgtaatgtgtagcagcctctgctgatcagctcatgtgctatatggaattctgaagtgaaaccatagttaaaagggatcggttagtggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0758100, RefSeq:Os03g0758100