Difference between revisions of "Os03g0797550"

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(Created page with "{{JaponicaGene| GeneName = Os03g0797550| Description = Similar to Indole-3-glycerol phosphate lyase (Fragment)| Version = NM_001186738.1 GI:297722606 GeneID:9268807| Lengt...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0797550|
 
GeneName = Os03g0797550|

Revision as of 19:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0797550

Description

Similar to Indole-3-glycerol phosphate lyase (Fragment)

Version

NM_001186738.1 GI:297722606 GeneID:9268807

Length

1668 bp

Definition

Oryza sativa Japonica Group Os03g0797550, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34077424..34079091

Sequence Coding Region

34077424..34077558,34077663..34077800,34077915..34077992,34078095..34078171,34078548..34079091

Expression

GEO Profiles:Os03g0797550

Genome Context

<gbrowseImage1> name=NC_008396:34077424..34079091 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34077424..34079091 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttcacggtgaaggcgtcgtcgccgtcgtcgccagctacgacgcgcctcacgggtgcgttgcacggcggcgcggcgcgggtcgcggcgcggaagctcccggcggcggcggtggcggcgtcgctgacgctcgatcgggcgccggcgccggccggcgccgagcgcgggatgtcgtcgtcggtgtcgcggaccatgtcgaggctaagggagaaggggaaggcggcgttcatcccgtacatcaccgccggcgacccggacatggggacgacggcggaggcgctgcgggtgctcgacgcctgcggcgccgacgtcatcgagctcggcgtgcccttctccgacccctacaccgacggccccgtcatccaggcctccgccgcgcgggcgctcgccgccggcgccacgatggacggggtcatgtcgatgctcgcggaggtgacgccggagctttcctgcccggtggtgctcttctcttacttcggccccatcgtccggcgaggtccggccaacttcaccgccgcagccaaagaagccggcgtacaaggtcttatagtaccagatcttccttacgtagagacatccactttcaggagtgaagccatcaagaacaacctagagctggtgctgcttactacaccagctacaccggcagacaggatgaaggcaatcacagcggcttcaggaggatttgtttatctggttagtgtcaatggggttacaggatctatccaaaacgtaaatccgcgtgttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggctttggcatatcaacccctgatcatgttagacagatagcagattggggtgcagatggagtgatcattggcagcgcaatggtgaggcagttgggtgaagcagcttctcccaaacaagggctcaaaaggctggagaagtatgctaggagcctcaaggatgcactaccatag</cdnaseq>

Protein Sequence

<aaseq>MAFTVKASSPSSPATTRLTGALHGGAARVAARKLPAAAVAASLT LDRAPAPAGAERGMSSSVSRTMSRLREKGKAAFIPYITAGDPDMGTTAEALRVLDACG ADVIELGVPFSDPYTDGPVIQASAARALAAGATMDGVMSMLAEVTPELSCPVVLFSYF GPIVRRGPANFTAAAKEAGVQGLIVPDLPYVETSTFRSEAIKNNLELVLLTTPATPAD RMKAITAASGGFVYLVSVNGVTGSIQNVNPRVEHLLQEIKQVTDKAVCVGFGISTPDH VRQIADWGADGVIIGSAMVRQLGEAASPKQGLKRLEKYARSLKDALP</aaseq>

Gene Sequence

<dnaseqindica>1534..1668#1292..1429#1100..1177#921..997#1..544#atggctttcacggtgaaggcgtcgtcgccgtcgtcgccagctacgacgcgcctcacgggtgcgttgcacggcggcgcggcgcgggtcgcggcgcggaagctcccggcggcggcggtggcggcgtcgctgacgctcgatcgggcgccggcgccggccggcgccgagcgcgggatgtcgtcgtcggtgtcgcggaccatgtcgaggctaagggagaaggggaaggcggcgttcatcccgtacatcaccgccggcgacccggacatggggacgacggcggaggcgctgcgggtgctcgacgcctgcggcgccgacgtcatcgagctcggcgtgcccttctccgacccctacaccgacggccccgtcatccaggcctccgccgcgcgggcgctcgccgccggcgccacgatggacggggtcatgtcgatgctcgcggaggtgacgccggagctttcctgcccggtggtgctcttctcttacttcggccccatcgtccggcgaggtccggccaacttcaccgccgcagccaaagaagccggcgtacaaggtatatgatattatccatccgcccctaaatatttgacgccgttaactttttaaacatatttgactattcgtcatattcaaaaatatgtaaaactacatatatatatatatatatatatataaaagtatgtttaacaatgaatcaaatgatggaaaatgaattaataattacttaaattttttaaataagacgaacggttaaacatgcttaaaaaaatcaacggcgtcaaatatttaaggatggagaaagtaatatactgtacctaacaattaacattctgtccatggtcatctgaatctaaaggcattctttttttttagttgtaacttgttgtagtagtttgctaatttgcagttgttacacatgtgtgttccaggtcttatagtaccagatcttccttacgtagagacatccactttcaggagtgaagccatcaagaacaacctagagctggtatatatctatgtagatttcattactatatgatcatcagtgaattaatctatttaattaattaccaataaattgaatctatgcgtgaattaatgggtgcaggtgctgcttactacaccagctacaccggcagacaggatgaaggcaatcacagcggcttcaggaggatttgtttatctggtaaatacactataacaaatcttcagaaaccctggttacttgttataagtttaagtagctttctgaaaaagaccaaataataacaaattgcttgctgtaaaacgtgtcatgcaggttagtgtcaatggggttacaggatctatccaaaacgtaaatccgcgtgttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggctttggcatatcaacccctgatcatgttagacaggtgattaaattatcattttatcatgcatatatgtttgtaccatctaagtttccttctcaacgattgcaaattctgaaaaaaatgtaattgtaaaatggacacagatagcagattggggtgcagatggagtgatcattggcagcgcaatggtgaggcagttgggtgaagcagcttctcccaaacaagggctcaaaaggctggagaagtatgctaggagcctcaaggatgcactaccatag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0797550, RefSeq:Os03g0797550