Difference between revisions of "Os03g0815200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0815200| Description = Similar to Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Version = NM_001058218.1 GI:115456164 GeneID:4334554| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0815200|
 
GeneName = Os03g0815200|

Revision as of 19:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0815200

Description

Similar to Methylenetetrahydrofolate reductase (EC 1.5.1.20)

Version

NM_001058218.1 GI:115456164 GeneID:4334554

Length

5505 bp

Definition

Oryza sativa Japonica Group Os03g0815200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35018557..35024061

Sequence Coding Region

35018873..35018956,35019288..35019622,35020076..35020253,35020352..35020432,35020776..35020887
,35020978..35021078,35021148..35021321,35021460..35021633,35021830..35021912
,35021999..35022059,35022216..35022398,35023777..35023995

Expression

GEO Profiles:Os03g0815200

Genome Context

<gbrowseImage1> name=NC_008396:35018557..35024061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35018557..35024061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggtgatcgagaagatccaggaggcggcggcggatgggcggacggtgttctcgttcgagtacttcccgcccaagacggaggaggggctcgacaacctgttcgagcggatggatcgcatggtggcgcacggccccaacttctgcgacatcacctggggcgccgggggatccaccgccgacctcaccctcgagatcgccaaccggatgcagaacatggtgtgtgtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgccttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctccacatggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggtacaacacattagagccaagtatggtgattattttggtattactgttgctggttatccagaggcccacccggatgcaatacaaagtacggaaggggctacaccagaagcatacagcaatgatcttgcttatttgaagcaaaaggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttctcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataatgcctataaataactacaaaggtttcctgcgcatgacagggttctgcaaaactaagataccagctgagatcactgctgcactggaacctattaaagataacgaggaggcggtcaaagcatatggaatccaccttggtactgaaatgtgcaagaaaattttagctactggaatcaagaccttgcacctttacacgctaaacatggagaagtctgctctaggaatattgatgaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggcccccaacaaatgttttccgtgtcaaggaggatgtccgccctatattctgggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacccacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgactaccagttcactcgaccacgtgggaggggtaagaagctccaagaggaatgggcggttccagtgaaatctgttgaagacattaacgagcgattcatgaacttctgtcaaggaaaacttacaagcagcccatggtctgagcttgatggccttcaacctgagacaaagataatagacgaccaattggtgaagattaaccagaagggcttccttaccattaacagccaacctgctgttaatggagagagatctgattcaacaagtgttggatggggtggtcctggaggctatgtttaccagaaggcctatcttgagttcttctgttcaaaagagaagctggatcagctaattgagaagagcaaggcattcccttctcttacatacattgccgtgaacaaggacggagagtcattctcaaacattcccacaaacgctgtgaatgcggtcacatggggtgttttccctggcaaggaaatagtccagccaactgtcgttgactcagccagctttatggtttggaaagacgaagctttcgaaatttggtcaaagggttgggcttgcctgttccctgagggcgactcatctagggagatactagacaaggtccagaagagctacttcttggttagtcttgtggacaacgactacatcaacggtgatctcttcgcggcgttcaaggagatttga</cdnaseq>

Protein Sequence

<aaseq>MKVIEKIQEAAADGRTVFSFEYFPPKTEEGLDNLFERMDRMVAH GPNFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDDALTTIKSN GIQNVLALRGDPPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDA IQSTEGATPEAYSNDLAYLKQKVDAGADLIITQLFYDTDIFLKFVNDCRQIGITCPIV PGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGTEMCKKILA TGIKTLHLYTLNMEKSALGILMNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWAN RPKSYISRTLGWDQYPHGRWGDSRNPSYGALTDYQFTRPRGRGKKLQEEWAVPVKSVE DINERFMNFCQGKLTSSPWSELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERS DSTSVGWGGPGGYVYQKAYLEFFCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIP TNAVNAVTWGVFPGKEIVQPTVVDSASFMVWKDEAFEIWSKGWACLFPEGDSSREILD KVQKSYFLVSLVDNDYINGDLFAAFKEI</aaseq>

Gene Sequence

<dnaseqindica>5106..5189#4440..4774#3809..3986#3630..3710#3175..3286#2984..3084#2741..2914#2429..2602#2150..2232#2003..2063#1664..1846#67..285#gcccgcgcaagccgcagcagcagcatcaggggaagggtctagaagcttctagaagcttcttccgagatgaaggtgatcgagaagatccaggaggcggcggcggatgggcggacggtgttctcgttcgagtacttcccgcccaagacggaggaggggctcgacaacctgttcgagcggatggatcgcatggtggcgcacggccccaacttctgcgacatcacctggggcgccgggggatccaccgccgacctcaccctcgagatcgccaaccggatgcagaacatggtacgcttgtgcgtgtgtgtgtgtgtgtttgtgtggtgtcgccgcctctcgatcgctcattctctcgcgcggcgcggtccgatctgatctgtttttttttgggcgcgatttggttcggcgtggcggaacggatcgtaggaagtggctatgtttgtgttgggtgggatgcttttggatcatgggtttagacaattagattcgctggttttggttcggggctttggtgagaactgagaaggggatgtgttcgatgaaatgccattttcgcttactcggtggtgattagatttggttaattgcatcagtcgttcctcgtttgcttcggtctcgtaagattgtgctgagacgagcgcacgtttatatactgcaatagttctcattgatacttgggacgaaatttgtttgagaccgtgctgttgtgttgtcggatgatgaggttgtgaaatggtgatataagagccgtttggatgataatcggtcgggtgatattctgcgataacgctgatagattaagaaataacaatgcctactttgagctccagttcggtttgcaactgagttatgcagaatgaggttccgttcatgttcaagtgccacacggtttagtgcctgattagtgctttttttttaagataatggaacttttgagctgttgtggttgcaatttggttgaaaactgggtttgtaactcgtagagttgatccatcctgatatctggtctcccagctcctggtaatggtaatgttaggagtgatctttccgagagaaaatgttttggtggattgaaacgaatttgccttagaagttggttagtgatcagcggatgattggatgatgtcacactattgggactagtttcctcacatggtgaggatgctagacatggagtggtgactttgggtggattcatagagatgactttgacaaaattcttggtagcaatatgtgccttttgcagccgtgctgatcccatgcaagatattgcatatcttgctgacttgtagttctacaagtaaacctggatattttctcctggcgtagatgatgttgataggattggcgaatcagttatcatgttgttttgtagtggcctatcatttatgaatacatcagatgcttgcatttcatctgttctctggactgggactcgtgactactgatggtcacaacacaaacaatgatttgtttttctgtgaatgtttggagccatgcatgcattgtacataagatgagcacagaagttatgtcttcatgccaatatatttctcaatataaatttcataaaataaagtatcttttgcaatttcaatatttcatacatcgttttcactggttaaatatagtcaatgctttatattattttggtgttgttttgcaggtgtgtgtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgccttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctccacatggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggtaaatatctcttcgattagttatgatagaaaggccaggatatggtggcgagctgattggtgctgccaatatttaggattatgtatataaaaaccatttatttgctgagagaaatcaccactatattcaaacctgcgttctattctccaattgcaggtacaacacattagagccaagtatggtgattattttggtattactgttgctggttatccaggttagcaaaacgtttctgctttatacagtgatattaaaccttaaaaattagaagctttatttatttatttttgtttcaaacgtcagaggcccacccggatgcaatacaaagtacggaaggggctacaccagaagcatacagcaatgatcttgcttatttgaagcaaaaggttctctttgatcacatgataatgactttttccattcaaatgagaacatcttctgttgtattaattaatcacctggacattgtctagcataagatcttatttcggaattatgtaaaactgttagaaaacataggtgtttgtttagcgtacctttgttctttgtcagcttcttatcgaatgcacactttcactgcaggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttctcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataatgcctataaataactacaaaggtttcctgcgcatgacagggttctgcaaaactaaggtatagcctgtttctgtagctccatgattagtaattgcatggagatagttcaaatggacatggatttatgtataagcttcaatgtgctgtacattgtttcccacagaatgccactgaaaattttgaatttaataacagataccagctgagatcactgctgcactggaacctattaaagataacgaggaggcggtcaaagcatatggaatccaccttggtactgaaatgtgcaagaaaattttagctactggaatcaagaccttgcacctttacacgctaaacatggagaagtctgctctaggaatattgatggtaatttccacatcttacttgatgcagtattttggtctggtgcatttctaacaagtaaaatttatccagaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggcccccaacaaatgttttccgtgtcaaggaggatgtccgccctatattctggtagttgtttaaaaaaaatatttgtcaaggtaattgaatcttattgttataaacactcattcaatctggtgaatgatgataactgagcagggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacccacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgactaccaggttacttccatgcccctctgttccaattacaaatttggtgttctcaaccattttttcccgatatgctgtctgcagtattttgaaacacactaaaagttacatttatctattataaactataaagtgaactcttacatatgatttagcaacgtcagtacctctgtgtactggtacttggtaattgtcgaatacttgaatgtgggattgtgcaacatcagttgtcgggcatgtctattatttgtctccatattacatagaattgttcttttgtgataacaagttaagaaattttcacaaagttgttgctgtgtgtagtaacgcgttccttcttattattttacagttcactcgaccacgtgggaggggtaagaagctccaagaggaatgggcggttccagtgaaatctgttgaagacattaacgaggtaactgctgggctgcttgatatattatatatctttattatgtatagataaatacgagtgtatcattttttttttgctaaccaatttctgtcacacagcgattcatgaacttctgtcaaggaaaacttacaagcagcccatggtctgagcttgatggccttcaacctgagacaaagataatagacgaccaattggtgaagattaaccagaagggcttccttaccattaacagccaacctgctgttaatggagagagatctgattcaacaagtgttggtatgttcaatctatttcttatgtttgttcttccttttgttactggaagcaggatctttaagcatgtgcatgtttctgccatggcgctcttatacagtggtagtacttaaaatgccagtagttcatgtgtcgattgtatctgaaattgagaattattatgatgtttcatgtttgtagtgggcatgaagattttaaaccttatttgtagctttactagtgacatttaattatgaaatgttcactggcatgtttaatcatatgcccctcccttattataataaacctgaaatcaacatcgccataatgtctgggttcactacaatcgacacattagctatttgctattccactgtttaaggtgcaaacttcaacttgttcattaatgtctggttttatgtataatgctatatgggcgtgccttgccaacctgcttactggtatcctactgtgcaggatggggtggtcctggaggctatgtttaccagaaggcctatcttgagttcttctgttcaaaagagaagctggatcagctaattgagaagagcaaggcattcccttctcttacatacattgccgtgaacaaggacggagagtcattctcaaacattcccacaaacgctgtgaatgcggtcacatggggtgttttccctggcaaggaaatagtccagccaactgtcgttgactcagccagctttatggtttggaaagacgaagctttcgaaatttggtcaaagggttgggcttgcctgttccctgagggcgactcatctagggagatactagacaaggtaattcgacacaaaccttagcgttgaacctaatattttgtcgtagataaaattgaacagaacttgttgcactgatctgaatgccaccttttctcctatcctcccaatttctcataagacttgcatgttaaatagagtgttttagaaggcattcgtctaaattctaaaataccatttggcatgttttccccttatcccatgccacttgaaccactgtatcagccgtgatagggttgtggcattgtgctacatttcattgtatactccctgtatactgaatgcatcacctgacctcacaagcttacacatttcgctgctcttcgcttctcaggtccagaagagctacttcttggttagtcttgtggacaacgactacatcaacggtgatctcttcgcggcgttcaaggagatttgatgacatcttatagtctgcaacctctcgtgtctgaattcctatctttatcaagtgttattgcttccacgactataggacagctttcgtcgaaagcttttgctcatgtgatctcgaaggattcatctagtctgatttttcgtgacttgtatcggttttattggattcatccaacatatatcaataaaaaatgagttgtgtttcctttcttcctagttcagttaaaattatttccctcctgcgcttgtgctgtaattgtctgtgtacctgttgtttgtgactgtgttagttcccttggatatgatttcgtatttgatat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0815200, RefSeq:Os03g0815200