Difference between revisions of "Os03g0837100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0837100| Description = Similar to Cellulose synthase-6| Version = NM_001058365.1 GI:115456458 GeneID:4334710| Length = 5513 bp| Definition...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0837100|
 
GeneName = Os03g0837100|

Revision as of 19:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0837100

Description

Similar to Cellulose synthase-6

Version

NM_001058365.1 GI:115456458 GeneID:4334710

Length

5513 bp

Definition

Oryza sativa Japonica Group Os03g0837100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36028489..36034001

Sequence Coding Region

36028656..36028736,36028833..36029028,36029114..36029322,36029415..36029517,36029600..36029774
,36030164..36030430,36030513..36030858,36030943..36031080,36031192..36031317
,36031413..36031625,36031718..36032009,36032106..36032302,36032391..36032741
,36032837..36033421

Expression

GEO Profiles:Os03g0837100

Genome Context

<gbrowseImage1> name=NC_008396:36028489..36034001 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36028489..36034001 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatccgccgcgacggggagcccgggccgaagccggtgaagcatacgaatgggcaggtgtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacccgcttcaaacgcctcaagggttgcgcccgcgtccccggcgatgaggaggaggaggacgtcgacgacctggagaacgagttcaactggagggacaagaccgactcgcagtatgtcgccgagtccatgctccacggccacatgagctatggccgcggcggtgacctcgacggcgtgccgcagcatttccagccaatccccaatgttcccctcctcaccaacggggagatggctgatgacatcccgccggagcagcacgcccttgtgccgtctttcatgggcggcggaggaaagaggatccaccctcttccttatgcggatccaaaccttcctgtgcaaccaagatccatggacccgtccaaggatctcgccgcgtatgggtatgggagtgtcgcgtggaaagaaagaatggaaagctggaagcagaagcaggagaggttacaccagatgaggaatgatggcggtggtaaagattgggacggcgatggcgatgatgcagatctaccactaatggatgaagctagacagccattgtccagaaagattccgatttcttcaagcctggtcaatccttataggatgattatcataattcggctggtggttctgggcttcttcttccactatcgagtgatgcatccagtgcctgatgcatttgcattatggctcatatccgtcatctgtgaaatctggttcgccatgtcttggattcttgatcagttcccaaagtggtttcctattgagagggaaacttaccttgaccggttgacattgaggtttgacaaggaaggccagcaatctcaactcgccccagttgatttttttgtcagtacggttgatcccatgaaggagcctcccttggtcacagcaaatactgttctgtctatccttgcggtagattatccggtcgacaaggtctcttgctatgtttctgatgatggggctgccatgctgacatttgaagcactgtctgaaacatctgaatttgcaaagaagtgggttcctttctgcaaaaggtacagtctcgagcctcgtgccccagaatggtacttccaacagaagatagactacctgaaagataaggtggcaccaaactttgtcagggagaggagagcaatgaagagggaatatgaggaattcaaggtcagaatcaatgcattggttgctaaagcccagaaagttcctgaggaaggatggacaatgcaggatggaactccctggcctggaaacaacgttcgtgatcatcctggaatgattcaggtcttccttggccaaagtggtggccatgatgtggaaggaaatgaactgcctcgattggtttatgtttcaagagaaaaacggccaggctataaccatcataagaaggctggtgctatgaacgcattggtccgagtctccgctgtactaactaatgctccatatatgttgaacttggattgtgatcactacatcaacaacagcaaggctataaaggaagcaatgtgttttatgatggatcccttggtaggaaagaaagtttgttatgtgcagttcccacaaagattcgatggcattgaccgtcatgatcgatatgctaataggaatgtcgtctttttcgatatcaacatgaaaggtttggatggtattcaaggccccatctatgtcggtactggatgtgtctttagaagacaggcgctgtatggttatgatgcccccaaatcaaagaaaccaccatcaaggacttgcaactgctggccaaagtggtgcatttgctgttgctgctttggtaacaggacaaacaagaagaagactgctaaacctaaaacagagaagaaaaagaggttgtttttcaagagagcagagaatcagtcgcctgcatatgctcttggtgagattgacgaaggtgctccaggagctgaaaatgaaaaggctggtattgtaaatcaacagaagttagaaaagaaatttggtcaatcttccgtttttgttgcgtccacacttcttgagaatggtggaaccctgaagagtgcaagcccagcatcactcttaaaggaagctatacatgtcatcagttgtggttacgaggacaagacagactggggaaaagagattggctggatctacggatccgttacagaggatattcttactgggtttaagatgcactgccatggttggcggtcgatttactgcatacctaagcgggctgcattcaaaggttctgcacctctcaatctttctgaccgtcttcaccaggttcttcggtgggcgcttggatctattgaaattttcttcagcaaccattgccctctttggtatggctatggaggtggattgaaatgtttggaaagattttcctacattaattccatcgtgtatccttggacatccattccactattggcttactgtacattgcctgccatctgtttgctgacaggaaaatttatcactccagagcttactaatatcgccagcctttggttcatgtcactatttatctgcatttttgctacgggcattctggaaatgagatggagtggtgtaggcatcgatgattggtggaggaacgagcagttttgggtcattggaggtgtctcttcacatctctttgctgtgttccaaggacttctcaaggtcatagctggtatcgatacaagcttcactgtgacatcaaagggtggagatgatgaagagttctcagagctgtataccttcaaatggacaaccttgttaataccccctaccactttgctcctattgaacttcatcggggtagtggctggcgtttccaacgcaatcaataacggatatgaatcatgggggccgctctttgggaagctgttctttgcattttgggtgattgtccatctgtatccgttcttgaagggtttggttggaaggcaaaacaggacaccaacaattgtcattgtctggtccattctgctggcttcaatcttctcgctcctctgggtccggattgatcctttcctggcaaagaatgacggccctcttctggaggagtgtggtttggattgcaactag</cdnaseq>

Protein Sequence

<aaseq>MEASAGLVAGSHNRNELVVIRRDGEPGPKPVKHTNGQVCQICGD DVGLTPDGEPFVACNECAFPVCRDCYEYERREGTQNCPQCKTRFKRLKGCARVPGDEE EEDVDDLENEFNWRDKTDSQYVAESMLHGHMSYGRGGDLDGVPQHFQPIPNVPLLTNG EMADDIPPEQHALVPSFMGGGGKRIHPLPYADPNLPVQPRSMDPSKDLAAYGYGSVAW KERMESWKQKQERLHQMRNDGGGKDWDGDGDDADLPLMDEARQPLSRKIPISSSLVNP YRMIIIIRLVVLGFFFHYRVMHPVPDAFALWLISVICEIWFAMSWILDQFPKWFPIER ETYLDRLTLRFDKEGQQSQLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVS CYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPN FVRERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFL GQSGGHDVEGNELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDCD HYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGL DGIQGPIYVGTGCVFRRQALYGYDAPKSKKPPSRTCNCWPKWCICCCCFGNRTNKKKT AKPKTEKKKRLFFKRAENQSPAYALGEIDEGAPGAENEKAGIVNQQKLEKKFGQSSVF VASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK MHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGG LKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICI FATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKG GDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAF WVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECG LDCN</aaseq>

Gene Sequence

<dnaseqindica>168..248#345..540#626..834#927..1029#1112..1286#1676..1942#2025..2370#2455..2592#2704..2829#2925..3137#3230..3521#3618..3814#3903..4253#4349..4933#cgcacaaggaaggaaacaagccgaagaatccacagcattctctcttcctctctcttcttcccccattttgctctcgccgccgcccacgccgttgctgctccgtcgttggtagcctctgctgctacgagggcgttgggatctggagatctggtagggaggattgcgggatggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatccgccgcgacggggagcccggggtacgcgcgcggcgctactgatttccggtgtctcgctctgcttggttgcctacttgctgctgatttttttgttcctctctctgtgtgtttgtgcagccgaagccggtgaagcatacgaatgggcaggtgtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacccgcttcaaacgcctcaagggtaacctcgccgcccgcaatgcccgccggatttaccgccctccgtcggttgctcacgcctccccccggtggttctggtttctcaggttgcgcccgcgtccccggcgatgaggaggaggaggacgtcgacgacctggagaacgagttcaactggagggacaagaccgactcgcagtatgtcgccgagtccatgctccacggccacatgagctatggccgcggcggtgacctcgacggcgtgccgcagcatttccagccaatccccaatgttcccctcctcaccaacggggagatggtacctgccaaatctcacgctgtttttttgcattgcggttgtctcagctttcaattggggttctcaatttggttgttctgatgtgcctgtaggctgatgacatcccgccggagcagcacgcccttgtgccgtctttcatgggcggcggaggaaagaggatccaccctcttccttatgcggatccaaaccttcctggtttgtatttggatcatcgcaaggctagcttctagttgtattttggtgcttcggattgactcaattggtggctgttgtgcagtgcaaccaagatccatggacccgtccaaggatctcgccgcgtatgggtatgggagtgtcgcgtggaaagaaagaatggaaagctggaagcagaagcaggagaggttacaccagatgaggaatgatggcggtggtaaagattgggacggcgatggcgatgatgcagatctaccactgtatgacactggaaactcgtttgacttttaatttgtttggtgcttctctgataggctatttttggtgtccttgcattggtcaaaccttaaattgggcatgattatgaccgaataacgacagaaaatccaataaactgtgtcagtgtgatagaatttggaatcatactggctgcttcaaattagtcacatagttcaaccatcatgtatgttttgctggatgaagggaatctcatcatcagccattttagtatgtggcctagaaaatttgtggtggttgctactgctagtaataatttctatccggtatttccttaagtagacatgtgttgccctgttgctatatgtgtttagagactcaaccatcgattctttcttgattcttttaacagaatggatgaagctagacagccattgtccagaaagattccgatttcttcaagcctggtcaatccttataggatgattatcataattcggctggtggttctgggcttcttcttccactatcgagtgatgcatccagtgcctgatgcatttgcattatggctcatatccgtcatctgtgaaatctggttcgccatgtcttggattcttgatcagttcccaaagtggtttcctattgagagggaaacttaccttgaccggttgacattgaggtttgttactcttgccaccttgtatcacttgccttctattctttccgacgttctgtgacttactattatttttcctggataggtttgacaaggaaggccagcaatctcaactcgccccagttgatttttttgtcagtacggttgatcccatgaaggagcctcccttggtcacagcaaatactgttctgtctatccttgcggtagattatccggtcgacaaggtctcttgctatgtttctgatgatggggctgccatgctgacatttgaagcactgtctgaaacatctgaatttgcaaagaagtgggttcctttctgcaaaaggtacagtctcgagcctcgtgccccagaatggtacttccaacagaagatagactacctgaaagataaggtggcaccaaactttgtcagggagaggagagcaatgaaggtacattgcatttctgttgtgttttgctatgatatgtagctcataaaattaatgctaattttgacctcaattcctttctctcagagggaatatgaggaattcaaggtcagaatcaatgcattggttgctaaagcccagaaagttcctgaggaaggatggacaatgcaggatggaactccctggcctggaaacaacgttcgtgatcatcctggaatgattcaggtatgcttttacagttcatggtgctgtttaattatctgctgacatgatgtgatggctactttccccttctcttgctttaccatgacaaatctcaaacttttgcaaccataggtcttccttggccaaagtggtggccatgatgtggaaggaaatgaactgcctcgattggtttatgtttcaagagaaaaacggccaggctataaccatcataagaaggctggtgctatgaacgcattggtaaagacaacacgttcaaggcatttgtcagtcttctatagcctgtagcagcatccagtggatattgatgtcctttctgtttgtctgtttttcaggtccgagtctccgctgtactaactaatgctccatatatgttgaacttggattgtgatcactacatcaacaacagcaaggctataaaggaagcaatgtgttttatgatggatcccttggtaggaaagaaagtttgttatgtgcagttcccacaaagattcgatggcattgaccgtcatgatcgatatgctaataggaatgtcgtctttttcgatgtaagatttatctccaatatttctgattctgttcatcgtgtatgttgagccatcaaacttgatgctgtttccctattatttatttcttgcagatcaacatgaaaggtttggatggtattcaaggccccatctatgtcggtactggatgtgtctttagaagacaggcgctgtatggttatgatgcccccaaatcaaagaaaccaccatcaaggacttgcaactgctggccaaagtggtgcatttgctgttgctgctttggtaacaggacaaacaagaagaagactgctaaacctaaaacagagaagaaaaagaggttgtttttcaagagagcagagaatcagtcgcctgcatatgctcttggtgagattgacgaaggtgctccaggtatcactttaacttccaagaaaaccctgtcgttattctagatgcttcctcatcttcattgtattagcacacctaatcttggaatggtttctgcaggagctgaaaatgaaaaggctggtattgtaaatcaacagaagttagaaaagaaatttggtcaatcttccgtttttgttgcgtccacacttcttgagaatggtggaaccctgaagagtgcaagcccagcatcactcttaaaggaagctatacatgtcatcagttgtggttacgaggacaagacagactggggaaaagaggtaaaatttggagcatggttgtgtgttagttggcaggtcgaatatcttccgttaccttgtaaaccataacttctttgtctttttgtagattggctggatctacggatccgttacagaggatattcttactgggtttaagatgcactgccatggttggcggtcgatttactgcatacctaagcgggctgcattcaaaggttctgcacctctcaatctttctgaccgtcttcaccaggttcttcggtgggcgcttggatctattgaaattttcttcagcaaccattgccctctttggtatggctatggaggtggattgaaatgtttggaaagattttcctacattaattccatcgtgtatccttggacatccattccactattggcttactgtacattgcctgccatctgtttgctgacaggaaaatttatcactccagaggtaacgcttattctgctcgtaattctgtgtggtgtgaaattgtagaagaccaatgacctgaaccttacttttcctccttttgttccattctgcagcttactaatatcgccagcctttggttcatgtcactatttatctgcatttttgctacgggcattctggaaatgagatggagtggtgtaggcatcgatgattggtggaggaacgagcagttttgggtcattggaggtgtctcttcacatctctttgctgtgttccaaggacttctcaaggtcatagctggtatcgatacaagcttcactgtgacatcaaagggtggagatgatgaagagttctcagagctgtataccttcaaatggacaaccttgttaataccccctaccactttgctcctattgaacttcatcggggtagtggctggcgtttccaacgcaatcaataacggatatgaatcatgggggccgctctttgggaagctgttctttgcattttgggtgattgtccatctgtatccgttcttgaagggtttggttggaaggcaaaacaggacaccaacaattgtcattgtctggtccattctgctggcttcaatcttctcgctcctctgggtccggattgatcctttcctggcaaagaatgacggccctcttctggaggagtgtggtttggattgcaactagaaggtcagcatgtgaacttccccaatcaagtgtgtgcttgaagaagtatttttgcaggtgtttgtgcccatatttttttttcattttttcctctgtagatagaaacacgaaaaaaaaacttgcatttcttttgttccatggtggtagctcagcctcatatctgcaatattgagcaaacgggaggctgcgacaaccttgtgcagttcggccacgaaaaatacagtgaatgccagtgtttgattgttcagcattctttattagtttggtggaaatttgatcgggtgagccgaacagaaagttgcttgattctgcattgctctccaccatctacaaaaactcggtacttgtttctcaataaggcaggaatggatctgccgtctggaatagaggaagatgcacattatttatgtagcgagttaaaatatgcctgaagggcttgttcattccttgttcctctttctatttcatttttttgtccttgttagaacaaatagatctctagttttagtgatttagcccatccggtgttgtaatttgtaaaggtgcccctttgttcaatacttcaattgcgtaatgtccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0837100, RefSeq:Os03g0837100